Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01948:01923
Extra
PDB:
ATOM 1 O3' G A1947 113.489 123.813 118.322 1.00 63.91 O
ATOM 2 P C A1948 113.550 122.591 117.278 1.00 65.99 P
ATOM 3 OP1 C A1948 114.962 122.183 117.184 1.00 66.17 O
ATOM 4 OP2 C A1948 112.821 122.963 116.041 1.00 66.49 O
ATOM 5 O5' C A1948 112.755 121.424 118.020 1.00 66.18 O
ATOM 6 C5' C A1948 113.194 120.955 119.304 1.00 66.42 C
ATOM 7 C4' C A1948 112.278 119.877 119.829 1.00 67.09 C
ATOM 8 O4' C A1948 110.969 120.424 120.131 1.00 67.28 O
ATOM 9 C3' C A1948 111.990 118.705 118.909 1.00 66.90 C
ATOM 10 O3' C A1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 11 C2' C A1948 110.718 118.137 119.524 1.00 66.91 C
ATOM 12 O2' C A1948 110.983 117.349 120.663 1.00 67.04 O
ATOM 13 C1' C A1948 109.987 119.414 119.953 1.00 67.23 C
ATOM 14 N1 C A1948 108.999 119.877 118.955 1.00 68.04 N
ATOM 15 C2 C A1948 107.645 119.527 119.122 1.00 67.43 C
ATOM 16 O2 C A1948 107.308 118.861 120.114 1.00 66.77 O
ATOM 17 N3 C A1948 106.742 119.926 118.195 1.00 67.12 N
ATOM 18 C4 C A1948 107.140 120.643 117.141 1.00 66.74 C
ATOM 19 N4 C A1948 106.221 121.000 116.245 1.00 65.73 N
ATOM 20 C5 C A1948 108.500 121.021 116.956 1.00 67.39 C
ATOM 21 C6 C A1948 109.387 120.623 117.876 1.00 67.46 C
ATOM 22 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 23 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 24 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 25 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
TER
ATOM 1 O3' G B1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 2 P U B1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 3 OP1 U B1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 4 OP2 U B1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 5 O5' U B1923 104.565 120.538 112.247 1.00 53.80 O
ATOM 6 C5' U B1923 103.692 120.306 111.129 1.00 53.92 C
ATOM 7 C4' U B1923 102.255 120.172 111.582 1.00 53.05 C
ATOM 8 O4' U B1923 102.066 118.903 112.266 1.00 52.42 O
ATOM 9 C3' U B1923 101.703 121.252 112.505 1.00 52.23 C
ATOM 10 O3' U B1923 100.370 121.548 112.118 1.00 55.37 O
ATOM 11 C2' U B1923 101.714 120.567 113.870 1.00 52.37 C
ATOM 12 O2' U B1923 100.711 121.040 114.743 1.00 51.94 O
ATOM 13 C1' U B1923 101.409 119.123 113.490 1.00 52.59 C
ATOM 14 N1 U B1923 101.877 118.119 114.458 1.00 54.98 N
ATOM 15 C2 U B1923 100.920 117.317 115.063 1.00 57.32 C
ATOM 16 O2 U B1923 99.726 117.410 114.826 1.00 59.43 O
ATOM 17 N3 U B1923 101.412 116.397 115.954 1.00 57.62 N
ATOM 18 C4 U B1923 102.732 116.195 116.295 1.00 58.19 C
ATOM 19 O4 U B1923 103.017 115.298 117.087 1.00 59.03 O
ATOM 20 C5 U B1923 103.661 117.062 115.632 1.00 56.58 C
ATOM 21 C6 U B1923 103.213 117.970 114.758 1.00 55.04 C
ATOM 22 P A B1924 100.004 123.020 111.576 1.00 57.25 P
ATOM 23 OP1 A B1924 100.428 124.006 112.611 1.00 58.03 O
ATOM 24 OP2 A B1924 98.592 123.012 111.105 1.00 58.57 O
ATOM 25 O5' A B1924 100.941 123.207 110.305 1.00 55.68 O
TER
ATOM 2 P C A1948 113.550 122.591 117.278 1.00 65.99 P
ATOM 3 OP1 C A1948 114.962 122.183 117.184 1.00 66.17 O
ATOM 4 OP2 C A1948 112.821 122.963 116.041 1.00 66.49 O
ATOM 5 O5' C A1948 112.755 121.424 118.020 1.00 66.18 O
ATOM 6 C5' C A1948 113.194 120.955 119.304 1.00 66.42 C
ATOM 7 C4' C A1948 112.278 119.877 119.829 1.00 67.09 C
ATOM 8 O4' C A1948 110.969 120.424 120.131 1.00 67.28 O
ATOM 9 C3' C A1948 111.990 118.705 118.909 1.00 66.90 C
ATOM 10 O3' C A1948 113.048 117.749 118.929 1.00 67.96 O
ATOM 11 C2' C A1948 110.718 118.137 119.524 1.00 66.91 C
ATOM 12 O2' C A1948 110.983 117.349 120.663 1.00 67.04 O
ATOM 13 C1' C A1948 109.987 119.414 119.953 1.00 67.23 C
ATOM 14 N1 C A1948 108.999 119.877 118.955 1.00 68.04 N
ATOM 15 C2 C A1948 107.645 119.527 119.122 1.00 67.43 C
ATOM 16 O2 C A1948 107.308 118.861 120.114 1.00 66.77 O
ATOM 17 N3 C A1948 106.742 119.926 118.195 1.00 67.12 N
ATOM 18 C4 C A1948 107.140 120.643 117.141 1.00 66.74 C
ATOM 19 N4 C A1948 106.221 121.000 116.245 1.00 65.73 N
ATOM 20 C5 C A1948 108.500 121.021 116.956 1.00 67.39 C
ATOM 21 C6 C A1948 109.387 120.623 117.876 1.00 67.46 C
ATOM 22 P U A1949 113.428 116.947 117.589 1.00 70.07 P
ATOM 23 OP1 U A1949 114.235 115.767 117.965 1.00 70.28 O
ATOM 24 OP2 U A1949 113.970 117.925 116.607 1.00 68.95 O
ATOM 25 O5' U A1949 112.029 116.406 117.045 1.00 72.80 O
TER
ATOM 1 O3' G B1922 106.002 122.021 110.791 1.00 53.64 O
ATOM 2 P U B1923 105.482 121.836 112.302 1.00 53.93 P
ATOM 3 OP1 U B1923 104.615 122.991 112.614 1.00 54.78 O
ATOM 4 OP2 U B1923 106.632 121.526 113.189 1.00 55.37 O
ATOM 5 O5' U B1923 104.565 120.538 112.247 1.00 53.80 O
ATOM 6 C5' U B1923 103.692 120.306 111.129 1.00 53.92 C
ATOM 7 C4' U B1923 102.255 120.172 111.582 1.00 53.05 C
ATOM 8 O4' U B1923 102.066 118.903 112.266 1.00 52.42 O
ATOM 9 C3' U B1923 101.703 121.252 112.505 1.00 52.23 C
ATOM 10 O3' U B1923 100.370 121.548 112.118 1.00 55.37 O
ATOM 11 C2' U B1923 101.714 120.567 113.870 1.00 52.37 C
ATOM 12 O2' U B1923 100.711 121.040 114.743 1.00 51.94 O
ATOM 13 C1' U B1923 101.409 119.123 113.490 1.00 52.59 C
ATOM 14 N1 U B1923 101.877 118.119 114.458 1.00 54.98 N
ATOM 15 C2 U B1923 100.920 117.317 115.063 1.00 57.32 C
ATOM 16 O2 U B1923 99.726 117.410 114.826 1.00 59.43 O
ATOM 17 N3 U B1923 101.412 116.397 115.954 1.00 57.62 N
ATOM 18 C4 U B1923 102.732 116.195 116.295 1.00 58.19 C
ATOM 19 O4 U B1923 103.017 115.298 117.087 1.00 59.03 O
ATOM 20 C5 U B1923 103.661 117.062 115.632 1.00 56.58 C
ATOM 21 C6 U B1923 103.213 117.970 114.758 1.00 55.04 C
ATOM 22 P A B1924 100.004 123.020 111.576 1.00 57.25 P
ATOM 23 OP1 A B1924 100.428 124.006 112.611 1.00 58.03 O
ATOM 24 OP2 A B1924 98.592 123.012 111.105 1.00 58.57 O
ATOM 25 O5' A B1924 100.941 123.207 110.305 1.00 55.68 O
TER
Atoms:
C2: (107.645,119.527,119.122)
OP1: (114.962,122.183,117.184)
OP2: (112.821,122.963,116.041)
C4: (107.140,120.643,117.141)
O5': (112.755,121.424,118.020)
C3': (111.990,118.705,118.909)
C1': (109.987,119.414,119.953)
O4': (110.969,120.424,120.131)
C5': (113.194,120.955,119.304)
P: (113.550,122.591,117.278)
O2: (107.308,118.861,120.114)
C4': (112.278,119.877,119.829)
C2': (110.718,118.137,119.524)
O2': (110.983,117.349,120.663)
N1: (108.999,119.877,118.955)
N3: (106.742,119.926,118.195)
N4: (106.221,121.000,116.245)
C6: (109.387,120.623,117.876)
C5: (108.500,121.021,116.956)
O3': (113.048,117.749,118.929)
OP1: (114.962,122.183,117.184)
OP2: (112.821,122.963,116.041)
C4: (107.140,120.643,117.141)
O5': (112.755,121.424,118.020)
C3': (111.990,118.705,118.909)
C1': (109.987,119.414,119.953)
O4': (110.969,120.424,120.131)
C5': (113.194,120.955,119.304)
P: (113.550,122.591,117.278)
O2: (107.308,118.861,120.114)
C4': (112.278,119.877,119.829)
C2': (110.718,118.137,119.524)
O2': (110.983,117.349,120.663)
N1: (108.999,119.877,118.955)
N3: (106.742,119.926,118.195)
N4: (106.221,121.000,116.245)
C6: (109.387,120.623,117.876)
C5: (108.500,121.021,116.956)
O3': (113.048,117.749,118.929)
C4: (102.732,116.195,116.295)
N3: (101.412,116.397,115.954)
OP1: (104.615,122.991,112.614)
OP2: (106.632,121.526,113.189)
C2: (100.920,117.317,115.063)
C1': (101.409,119.123,113.490)
C3': (101.703,121.252,112.505)
O5': (104.565,120.538,112.247)
O4': (102.066,118.903,112.266)
C5': (103.692,120.306,111.129)
P: (105.482,121.836,112.302)
C4': (102.255,120.172,111.582)
C2': (101.714,120.567,113.870)
O2': (100.711,121.040,114.743)
N1: (101.877,118.119,114.458)
O4: (103.017,115.298,117.087)
O2: (99.726,117.410,114.826)
C6: (103.213,117.970,114.758)
C5: (103.661,117.062,115.632)
O3': (100.370,121.548,112.118)
N3: (101.412,116.397,115.954)
OP1: (104.615,122.991,112.614)
OP2: (106.632,121.526,113.189)
C2: (100.920,117.317,115.063)
C1': (101.409,119.123,113.490)
C3': (101.703,121.252,112.505)
O5': (104.565,120.538,112.247)
O4': (102.066,118.903,112.266)
C5': (103.692,120.306,111.129)
P: (105.482,121.836,112.302)
C4': (102.255,120.172,111.582)
C2': (101.714,120.567,113.870)
O2': (100.711,121.040,114.743)
N1: (101.877,118.119,114.458)
O4: (103.017,115.298,117.087)
O2: (99.726,117.410,114.826)
C6: (103.213,117.970,114.758)
C5: (103.661,117.062,115.632)
O3': (100.370,121.548,112.118)
Image (generated by PyMOL):