Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01379:01378
Extra
PDB:
ATOM 1 O3' U A1378 63.387 170.605 65.686 1.00 46.18 O
ATOM 2 P C A1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 3 OP1 C A1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 4 OP2 C A1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 5 O5' C A1379 64.405 172.556 64.487 1.00 48.84 O
ATOM 6 C5' C A1379 65.640 172.807 65.195 1.00 47.90 C
ATOM 7 C4' C A1379 66.438 173.847 64.456 1.00 47.98 C
ATOM 8 O4' C A1379 66.829 173.303 63.171 1.00 47.05 O
ATOM 9 C3' C A1379 65.642 175.107 64.142 1.00 47.56 C
ATOM 10 O3' C A1379 65.769 176.062 65.195 1.00 47.62 O
ATOM 11 C2' C A1379 66.267 175.582 62.843 1.00 47.59 C
ATOM 12 O2' C A1379 67.482 176.261 63.066 1.00 48.06 O
ATOM 13 C1' C A1379 66.572 174.250 62.150 1.00 48.67 C
ATOM 14 N1 C A1379 65.507 173.707 61.271 1.00 50.66 N
ATOM 15 C2 C A1379 64.968 174.512 60.240 1.00 50.19 C
ATOM 16 O2 C A1379 65.377 175.671 60.090 1.00 51.74 O
ATOM 17 N3 C A1379 64.014 173.999 59.436 1.00 50.16 N
ATOM 18 C4 C A1379 63.586 172.750 59.618 1.00 50.67 C
ATOM 19 N4 C A1379 62.641 172.293 58.798 1.00 51.16 N
ATOM 20 C5 C A1379 64.107 171.914 60.650 1.00 51.33 C
ATOM 21 C6 C A1379 65.053 172.427 61.445 1.00 51.08 C
ATOM 22 P C A1380 64.478 176.862 65.717 1.00 47.31 P
ATOM 23 OP1 C A1380 64.935 177.677 66.868 1.00 46.61 O
ATOM 24 OP2 C A1380 63.343 175.924 65.896 1.00 47.89 O
ATOM 25 O5' C A1380 64.119 177.834 64.510 1.00 48.18 O
TER
ATOM 1 O3' U B1377 62.128 169.017 59.926 1.00 36.10 O
ATOM 2 P U B1378 60.818 169.018 60.849 1.00 40.42 P
ATOM 3 OP1 U B1378 59.938 167.905 60.412 1.00 43.72 O
ATOM 4 OP2 U B1378 60.278 170.402 60.919 1.00 40.51 O
ATOM 5 O5' U B1378 61.353 168.612 62.287 1.00 42.08 O
ATOM 6 C5' U B1378 62.109 169.544 63.053 1.00 44.44 C
ATOM 7 C4' U B1378 62.847 168.847 64.158 1.00 43.65 C
ATOM 8 O4' U B1378 63.560 167.714 63.622 1.00 43.17 O
ATOM 9 C3' U B1378 63.943 169.715 64.731 1.00 44.13 C
ATOM 10 O3' U B1378 63.387 170.605 65.686 1.00 46.18 O
ATOM 11 C2' U B1378 64.904 168.697 65.331 1.00 43.72 C
ATOM 12 O2' U B1378 64.520 168.322 66.634 1.00 47.10 O
ATOM 13 C1' U B1378 64.728 167.505 64.381 1.00 41.83 C
ATOM 14 N1 U B1378 65.823 167.151 63.464 1.00 40.37 N
ATOM 15 C2 U B1378 66.355 168.118 62.629 1.00 40.89 C
ATOM 16 O2 U B1378 65.953 169.265 62.596 1.00 43.63 O
ATOM 17 N3 U B1378 67.379 167.685 61.826 1.00 40.70 N
ATOM 18 C4 U B1378 67.911 166.412 61.767 1.00 41.65 C
ATOM 19 O4 U B1378 68.847 166.175 60.998 1.00 41.18 O
ATOM 20 C5 U B1378 67.300 165.475 62.648 1.00 41.43 C
ATOM 21 C6 U B1378 66.304 165.868 63.444 1.00 41.31 C
ATOM 22 P C B1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 23 OP1 C B1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 24 OP2 C B1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 25 O5' C B1379 64.405 172.556 64.487 1.00 48.84 O
TER
ATOM 2 P C A1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 3 OP1 C A1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 4 OP2 C A1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 5 O5' C A1379 64.405 172.556 64.487 1.00 48.84 O
ATOM 6 C5' C A1379 65.640 172.807 65.195 1.00 47.90 C
ATOM 7 C4' C A1379 66.438 173.847 64.456 1.00 47.98 C
ATOM 8 O4' C A1379 66.829 173.303 63.171 1.00 47.05 O
ATOM 9 C3' C A1379 65.642 175.107 64.142 1.00 47.56 C
ATOM 10 O3' C A1379 65.769 176.062 65.195 1.00 47.62 O
ATOM 11 C2' C A1379 66.267 175.582 62.843 1.00 47.59 C
ATOM 12 O2' C A1379 67.482 176.261 63.066 1.00 48.06 O
ATOM 13 C1' C A1379 66.572 174.250 62.150 1.00 48.67 C
ATOM 14 N1 C A1379 65.507 173.707 61.271 1.00 50.66 N
ATOM 15 C2 C A1379 64.968 174.512 60.240 1.00 50.19 C
ATOM 16 O2 C A1379 65.377 175.671 60.090 1.00 51.74 O
ATOM 17 N3 C A1379 64.014 173.999 59.436 1.00 50.16 N
ATOM 18 C4 C A1379 63.586 172.750 59.618 1.00 50.67 C
ATOM 19 N4 C A1379 62.641 172.293 58.798 1.00 51.16 N
ATOM 20 C5 C A1379 64.107 171.914 60.650 1.00 51.33 C
ATOM 21 C6 C A1379 65.053 172.427 61.445 1.00 51.08 C
ATOM 22 P C A1380 64.478 176.862 65.717 1.00 47.31 P
ATOM 23 OP1 C A1380 64.935 177.677 66.868 1.00 46.61 O
ATOM 24 OP2 C A1380 63.343 175.924 65.896 1.00 47.89 O
ATOM 25 O5' C A1380 64.119 177.834 64.510 1.00 48.18 O
TER
ATOM 1 O3' U B1377 62.128 169.017 59.926 1.00 36.10 O
ATOM 2 P U B1378 60.818 169.018 60.849 1.00 40.42 P
ATOM 3 OP1 U B1378 59.938 167.905 60.412 1.00 43.72 O
ATOM 4 OP2 U B1378 60.278 170.402 60.919 1.00 40.51 O
ATOM 5 O5' U B1378 61.353 168.612 62.287 1.00 42.08 O
ATOM 6 C5' U B1378 62.109 169.544 63.053 1.00 44.44 C
ATOM 7 C4' U B1378 62.847 168.847 64.158 1.00 43.65 C
ATOM 8 O4' U B1378 63.560 167.714 63.622 1.00 43.17 O
ATOM 9 C3' U B1378 63.943 169.715 64.731 1.00 44.13 C
ATOM 10 O3' U B1378 63.387 170.605 65.686 1.00 46.18 O
ATOM 11 C2' U B1378 64.904 168.697 65.331 1.00 43.72 C
ATOM 12 O2' U B1378 64.520 168.322 66.634 1.00 47.10 O
ATOM 13 C1' U B1378 64.728 167.505 64.381 1.00 41.83 C
ATOM 14 N1 U B1378 65.823 167.151 63.464 1.00 40.37 N
ATOM 15 C2 U B1378 66.355 168.118 62.629 1.00 40.89 C
ATOM 16 O2 U B1378 65.953 169.265 62.596 1.00 43.63 O
ATOM 17 N3 U B1378 67.379 167.685 61.826 1.00 40.70 N
ATOM 18 C4 U B1378 67.911 166.412 61.767 1.00 41.65 C
ATOM 19 O4 U B1378 68.847 166.175 60.998 1.00 41.18 O
ATOM 20 C5 U B1378 67.300 165.475 62.648 1.00 41.43 C
ATOM 21 C6 U B1378 66.304 165.868 63.444 1.00 41.31 C
ATOM 22 P C B1379 63.083 172.125 65.263 1.00 50.06 P
ATOM 23 OP1 C B1379 62.988 172.919 66.515 1.00 50.20 O
ATOM 24 OP2 C B1379 61.963 172.159 64.300 1.00 48.80 O
ATOM 25 O5' C B1379 64.405 172.556 64.487 1.00 48.84 O
TER
Atoms:
C2: (64.968,174.512,60.240)
OP1: (62.988,172.919,66.515)
OP2: (61.963,172.159,64.300)
C4: (63.586,172.750,59.618)
O5': (64.405,172.556,64.487)
C3': (65.642,175.107,64.142)
C1': (66.572,174.250,62.150)
O4': (66.829,173.303,63.171)
C5': (65.640,172.807,65.195)
P: (63.083,172.125,65.263)
O2: (65.377,175.671,60.090)
C4': (66.438,173.847,64.456)
C2': (66.267,175.582,62.843)
O2': (67.482,176.261,63.066)
N1: (65.507,173.707,61.271)
N3: (64.014,173.999,59.436)
N4: (62.641,172.293,58.798)
C6: (65.053,172.427,61.445)
C5: (64.107,171.914,60.650)
O3': (65.769,176.062,65.195)
OP1: (62.988,172.919,66.515)
OP2: (61.963,172.159,64.300)
C4: (63.586,172.750,59.618)
O5': (64.405,172.556,64.487)
C3': (65.642,175.107,64.142)
C1': (66.572,174.250,62.150)
O4': (66.829,173.303,63.171)
C5': (65.640,172.807,65.195)
P: (63.083,172.125,65.263)
O2: (65.377,175.671,60.090)
C4': (66.438,173.847,64.456)
C2': (66.267,175.582,62.843)
O2': (67.482,176.261,63.066)
N1: (65.507,173.707,61.271)
N3: (64.014,173.999,59.436)
N4: (62.641,172.293,58.798)
C6: (65.053,172.427,61.445)
C5: (64.107,171.914,60.650)
O3': (65.769,176.062,65.195)
C4: (67.911,166.412,61.767)
N3: (67.379,167.685,61.826)
OP1: (59.938,167.905,60.412)
OP2: (60.278,170.402,60.919)
C2: (66.355,168.118,62.629)
C1': (64.728,167.505,64.381)
C3': (63.943,169.715,64.731)
O5': (61.353,168.612,62.287)
O4': (63.560,167.714,63.622)
C5': (62.109,169.544,63.053)
P: (60.818,169.018,60.849)
C4': (62.847,168.847,64.158)
C2': (64.904,168.697,65.331)
O2': (64.520,168.322,66.634)
N1: (65.823,167.151,63.464)
O4: (68.847,166.175,60.998)
O2: (65.953,169.265,62.596)
C6: (66.304,165.868,63.444)
C5: (67.300,165.475,62.648)
O3': (63.387,170.605,65.686)
N3: (67.379,167.685,61.826)
OP1: (59.938,167.905,60.412)
OP2: (60.278,170.402,60.919)
C2: (66.355,168.118,62.629)
C1': (64.728,167.505,64.381)
C3': (63.943,169.715,64.731)
O5': (61.353,168.612,62.287)
O4': (63.560,167.714,63.622)
C5': (62.109,169.544,63.053)
P: (60.818,169.018,60.849)
C4': (62.847,168.847,64.158)
C2': (64.904,168.697,65.331)
O2': (64.520,168.322,66.634)
N1: (65.823,167.151,63.464)
O4: (68.847,166.175,60.998)
O2: (65.953,169.265,62.596)
C6: (66.304,165.868,63.444)
C5: (67.300,165.475,62.648)
O3': (63.387,170.605,65.686)
Image (generated by PyMOL):