Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01003:0613
Extra
PDB:
ATOM 1 O3' C A1002 53.892 94.414 84.776 1.00 30.40 O
ATOM 2 P C A1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 3 OP1 C A1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 4 OP2 C A1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 5 O5' C A1003 54.231 96.910 85.185 1.00 31.34 O
ATOM 6 C5' C A1003 53.384 97.018 86.340 1.00 33.36 C
ATOM 7 C4' C A1003 54.181 97.476 87.543 1.00 36.53 C
ATOM 8 O4' C A1003 54.652 98.848 87.369 1.00 37.12 O
ATOM 9 C3' C A1003 53.409 97.465 88.863 1.00 37.44 C
ATOM 10 O3' C A1003 54.291 97.057 89.904 1.00 37.95 O
ATOM 11 C2' C A1003 53.041 98.933 89.047 1.00 37.25 C
ATOM 12 O2' C A1003 52.812 99.273 90.396 1.00 37.35 O
ATOM 13 C1' C A1003 54.299 99.609 88.510 1.00 38.02 C
ATOM 14 N1 C A1003 54.155 101.036 88.141 1.00 40.09 N
ATOM 15 C2 C A1003 54.583 102.030 89.061 1.00 41.47 C
ATOM 16 O2 C A1003 55.071 101.688 90.150 1.00 44.30 O
ATOM 17 N3 C A1003 54.452 103.334 88.734 1.00 39.79 N
ATOM 18 C4 C A1003 53.927 103.675 87.558 1.00 40.50 C
ATOM 19 N4 C A1003 53.819 104.971 87.283 1.00 40.87 N
ATOM 20 C5 C A1003 53.489 102.699 86.609 1.00 40.47 C
ATOM 21 C6 C A1003 53.619 101.404 86.939 1.00 40.09 C
ATOM 22 P G A1004 54.633 95.496 90.092 1.00 40.38 P
ATOM 23 OP1 G A1004 56.039 95.390 90.556 1.00 42.16 O
ATOM 24 OP2 G A1004 54.220 94.774 88.862 1.00 40.28 O
ATOM 25 O5' G A1004 53.677 95.024 91.278 1.00 39.02 O
TER
ATOM 1 O3' U B 612 50.610 107.928 85.615 1.00 31.39 O
ATOM 2 P U B 613 50.292 106.353 85.708 1.00 32.19 P
ATOM 3 OP1 U B 613 51.520 105.620 85.289 1.00 28.08 O
ATOM 4 OP2 U B 613 49.016 106.117 84.987 1.00 32.58 O
ATOM 5 O5' U B 613 50.026 106.096 87.262 1.00 30.20 O
ATOM 6 C5' U B 613 51.088 106.253 88.214 1.00 30.55 C
ATOM 7 C4' U B 613 50.569 106.196 89.634 1.00 30.71 C
ATOM 8 O4' U B 613 49.560 107.214 89.844 1.00 32.46 O
ATOM 9 C3' U B 613 49.838 104.952 90.106 1.00 29.57 C
ATOM 10 O3' U B 613 50.727 103.864 90.355 1.00 28.53 O
ATOM 11 C2' U B 613 49.234 105.468 91.408 1.00 29.88 C
ATOM 12 O2' U B 613 50.196 105.593 92.435 1.00 28.61 O
ATOM 13 C1' U B 613 48.819 106.885 91.008 1.00 30.72 C
ATOM 14 N1 U B 613 47.380 106.992 90.726 1.00 31.55 N
ATOM 15 C2 U B 613 46.535 107.218 91.798 1.00 33.76 C
ATOM 16 O2 U B 613 46.934 107.358 92.941 1.00 36.47 O
ATOM 17 N3 U B 613 45.202 107.268 91.487 1.00 34.83 N
ATOM 18 C4 U B 613 44.634 107.118 90.248 1.00 34.80 C
ATOM 19 O4 U B 613 43.407 107.117 90.143 1.00 35.28 O
ATOM 20 C5 U B 613 45.571 106.907 89.187 1.00 34.86 C
ATOM 21 C6 U B 613 46.879 106.855 89.456 1.00 32.85 C
ATOM 22 P U B 614 50.243 102.352 90.077 1.00 27.36 P
ATOM 23 OP1 U B 614 51.420 101.465 90.214 1.00 26.41 O
ATOM 24 OP2 U B 614 49.463 102.336 88.818 1.00 27.82 O
ATOM 25 O5' U B 614 49.237 102.039 91.269 1.00 26.03 O
TER
ATOM 2 P C A1003 55.017 95.562 84.854 1.00 29.36 P
ATOM 3 OP1 C A1003 55.642 95.722 83.524 1.00 33.73 O
ATOM 4 OP2 C A1003 55.865 95.220 86.017 1.00 31.83 O
ATOM 5 O5' C A1003 54.231 96.910 85.185 1.00 31.34 O
ATOM 6 C5' C A1003 53.384 97.018 86.340 1.00 33.36 C
ATOM 7 C4' C A1003 54.181 97.476 87.543 1.00 36.53 C
ATOM 8 O4' C A1003 54.652 98.848 87.369 1.00 37.12 O
ATOM 9 C3' C A1003 53.409 97.465 88.863 1.00 37.44 C
ATOM 10 O3' C A1003 54.291 97.057 89.904 1.00 37.95 O
ATOM 11 C2' C A1003 53.041 98.933 89.047 1.00 37.25 C
ATOM 12 O2' C A1003 52.812 99.273 90.396 1.00 37.35 O
ATOM 13 C1' C A1003 54.299 99.609 88.510 1.00 38.02 C
ATOM 14 N1 C A1003 54.155 101.036 88.141 1.00 40.09 N
ATOM 15 C2 C A1003 54.583 102.030 89.061 1.00 41.47 C
ATOM 16 O2 C A1003 55.071 101.688 90.150 1.00 44.30 O
ATOM 17 N3 C A1003 54.452 103.334 88.734 1.00 39.79 N
ATOM 18 C4 C A1003 53.927 103.675 87.558 1.00 40.50 C
ATOM 19 N4 C A1003 53.819 104.971 87.283 1.00 40.87 N
ATOM 20 C5 C A1003 53.489 102.699 86.609 1.00 40.47 C
ATOM 21 C6 C A1003 53.619 101.404 86.939 1.00 40.09 C
ATOM 22 P G A1004 54.633 95.496 90.092 1.00 40.38 P
ATOM 23 OP1 G A1004 56.039 95.390 90.556 1.00 42.16 O
ATOM 24 OP2 G A1004 54.220 94.774 88.862 1.00 40.28 O
ATOM 25 O5' G A1004 53.677 95.024 91.278 1.00 39.02 O
TER
ATOM 1 O3' U B 612 50.610 107.928 85.615 1.00 31.39 O
ATOM 2 P U B 613 50.292 106.353 85.708 1.00 32.19 P
ATOM 3 OP1 U B 613 51.520 105.620 85.289 1.00 28.08 O
ATOM 4 OP2 U B 613 49.016 106.117 84.987 1.00 32.58 O
ATOM 5 O5' U B 613 50.026 106.096 87.262 1.00 30.20 O
ATOM 6 C5' U B 613 51.088 106.253 88.214 1.00 30.55 C
ATOM 7 C4' U B 613 50.569 106.196 89.634 1.00 30.71 C
ATOM 8 O4' U B 613 49.560 107.214 89.844 1.00 32.46 O
ATOM 9 C3' U B 613 49.838 104.952 90.106 1.00 29.57 C
ATOM 10 O3' U B 613 50.727 103.864 90.355 1.00 28.53 O
ATOM 11 C2' U B 613 49.234 105.468 91.408 1.00 29.88 C
ATOM 12 O2' U B 613 50.196 105.593 92.435 1.00 28.61 O
ATOM 13 C1' U B 613 48.819 106.885 91.008 1.00 30.72 C
ATOM 14 N1 U B 613 47.380 106.992 90.726 1.00 31.55 N
ATOM 15 C2 U B 613 46.535 107.218 91.798 1.00 33.76 C
ATOM 16 O2 U B 613 46.934 107.358 92.941 1.00 36.47 O
ATOM 17 N3 U B 613 45.202 107.268 91.487 1.00 34.83 N
ATOM 18 C4 U B 613 44.634 107.118 90.248 1.00 34.80 C
ATOM 19 O4 U B 613 43.407 107.117 90.143 1.00 35.28 O
ATOM 20 C5 U B 613 45.571 106.907 89.187 1.00 34.86 C
ATOM 21 C6 U B 613 46.879 106.855 89.456 1.00 32.85 C
ATOM 22 P U B 614 50.243 102.352 90.077 1.00 27.36 P
ATOM 23 OP1 U B 614 51.420 101.465 90.214 1.00 26.41 O
ATOM 24 OP2 U B 614 49.463 102.336 88.818 1.00 27.82 O
ATOM 25 O5' U B 614 49.237 102.039 91.269 1.00 26.03 O
TER
Atoms:
C2: (54.583,102.030,89.061)
OP1: (55.642,95.722,83.524)
OP2: (55.865,95.220,86.017)
C4: (53.927,103.675,87.558)
O5': (54.231,96.910,85.185)
C3': (53.409,97.465,88.863)
C1': (54.299,99.609,88.510)
O4': (54.652,98.848,87.369)
C5': (53.384,97.018,86.340)
P: (55.017,95.562,84.854)
O2: (55.071,101.688,90.150)
C4': (54.181,97.476,87.543)
C2': (53.041,98.933,89.047)
O2': (52.812,99.273,90.396)
N1: (54.155,101.036,88.141)
N3: (54.452,103.334,88.734)
N4: (53.819,104.971,87.283)
C6: (53.619,101.404,86.939)
C5: (53.489,102.699,86.609)
O3': (54.291,97.057,89.904)
OP1: (55.642,95.722,83.524)
OP2: (55.865,95.220,86.017)
C4: (53.927,103.675,87.558)
O5': (54.231,96.910,85.185)
C3': (53.409,97.465,88.863)
C1': (54.299,99.609,88.510)
O4': (54.652,98.848,87.369)
C5': (53.384,97.018,86.340)
P: (55.017,95.562,84.854)
O2: (55.071,101.688,90.150)
C4': (54.181,97.476,87.543)
C2': (53.041,98.933,89.047)
O2': (52.812,99.273,90.396)
N1: (54.155,101.036,88.141)
N3: (54.452,103.334,88.734)
N4: (53.819,104.971,87.283)
C6: (53.619,101.404,86.939)
C5: (53.489,102.699,86.609)
O3': (54.291,97.057,89.904)
C4: (44.634,107.118,90.248)
N3: (45.202,107.268,91.487)
OP1: (51.520,105.620,85.289)
OP2: (49.016,106.117,84.987)
C2: (46.535,107.218,91.798)
C1': (48.819,106.885,91.008)
C3': (49.838,104.952,90.106)
O5': (50.026,106.096,87.262)
O4': (49.560,107.214,89.844)
C5': (51.088,106.253,88.214)
P: (50.292,106.353,85.708)
C4': (50.569,106.196,89.634)
C2': (49.234,105.468,91.408)
O2': (50.196,105.593,92.435)
N1: (47.380,106.992,90.726)
O4: (43.407,107.117,90.143)
O2: (46.934,107.358,92.941)
C6: (46.879,106.855,89.456)
C5: (45.571,106.907,89.187)
O3': (50.727,103.864,90.355)
N3: (45.202,107.268,91.487)
OP1: (51.520,105.620,85.289)
OP2: (49.016,106.117,84.987)
C2: (46.535,107.218,91.798)
C1': (48.819,106.885,91.008)
C3': (49.838,104.952,90.106)
O5': (50.026,106.096,87.262)
O4': (49.560,107.214,89.844)
C5': (51.088,106.253,88.214)
P: (50.292,106.353,85.708)
C4': (50.569,106.196,89.634)
C2': (49.234,105.468,91.408)
O2': (50.196,105.593,92.435)
N1: (47.380,106.992,90.726)
O4: (43.407,107.117,90.143)
O2: (46.934,107.358,92.941)
C6: (46.879,106.855,89.456)
C5: (45.571,106.907,89.187)
O3': (50.727,103.864,90.355)
Image (generated by PyMOL):