Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01948:01923
Extra
PDB:
ATOM 1 O3' G A1947 113.170 123.437 117.806 1.00 50.44 O
ATOM 2 P C A1948 113.228 122.211 116.769 1.00 52.17 P
ATOM 3 OP1 C A1948 114.648 121.807 116.662 1.00 53.50 O
ATOM 4 OP2 C A1948 112.480 122.580 115.540 1.00 51.52 O
ATOM 5 O5' C A1948 112.434 121.050 117.518 1.00 51.12 O
ATOM 6 C5' C A1948 112.903 120.538 118.777 1.00 51.08 C
ATOM 7 C4' C A1948 111.990 119.444 119.278 1.00 51.04 C
ATOM 8 O4' C A1948 110.678 119.983 119.569 1.00 49.96 O
ATOM 9 C3' C A1948 111.714 118.304 118.316 1.00 50.90 C
ATOM 10 O3' C A1948 112.765 117.345 118.341 1.00 52.87 O
ATOM 11 C2' C A1948 110.428 117.719 118.881 1.00 50.30 C
ATOM 12 O2' C A1948 110.662 116.851 119.963 1.00 51.57 O
ATOM 13 C1' C A1948 109.703 118.974 119.372 1.00 49.48 C
ATOM 14 N1 C A1948 108.693 119.458 118.414 1.00 49.19 N
ATOM 15 C2 C A1948 107.388 118.940 118.489 1.00 48.04 C
ATOM 16 O2 C A1948 107.108 118.129 119.389 1.00 46.09 O
ATOM 17 N3 C A1948 106.468 119.339 117.581 1.00 47.91 N
ATOM 18 C4 C A1948 106.800 120.220 116.635 1.00 47.86 C
ATOM 19 N4 C A1948 105.862 120.569 115.745 1.00 47.29 N
ATOM 20 C5 C A1948 108.108 120.782 116.555 1.00 48.11 C
ATOM 21 C6 C A1948 109.013 120.379 117.455 1.00 48.11 C
ATOM 22 P U A1949 113.106 116.497 117.020 1.00 55.40 P
ATOM 23 OP1 U A1949 113.860 115.291 117.434 1.00 55.32 O
ATOM 24 OP2 U A1949 113.698 117.424 116.019 1.00 54.70 O
ATOM 25 O5' U A1949 111.685 116.014 116.490 1.00 58.48 O
TER
ATOM 1 O3' G B1922 105.661 121.558 110.314 1.00 40.98 O
ATOM 2 P U B1923 105.095 121.362 111.802 1.00 40.86 P
ATOM 3 OP1 U B1923 104.179 122.492 112.087 1.00 41.20 O
ATOM 4 OP2 U B1923 106.229 121.091 112.716 1.00 42.31 O
ATOM 5 O5' U B1923 104.217 120.041 111.706 1.00 41.60 O
ATOM 6 C5' U B1923 103.341 119.828 110.592 1.00 41.26 C
ATOM 7 C4' U B1923 101.916 119.658 111.061 1.00 41.43 C
ATOM 8 O4' U B1923 101.763 118.380 111.738 1.00 41.60 O
ATOM 9 C3' U B1923 101.372 120.719 112.010 1.00 41.35 C
ATOM 10 O3' U B1923 100.026 120.985 111.670 1.00 42.87 O
ATOM 11 C2' U B1923 101.438 120.029 113.370 1.00 42.49 C
ATOM 12 O2' U B1923 100.455 120.492 114.276 1.00 42.64 O
ATOM 13 C1' U B1923 101.145 118.582 112.991 1.00 42.07 C
ATOM 14 N1 U B1923 101.658 117.578 113.937 1.00 43.24 N
ATOM 15 C2 U B1923 100.726 116.837 114.653 1.00 44.29 C
ATOM 16 O2 U B1923 99.521 117.005 114.557 1.00 44.27 O
ATOM 17 N3 U B1923 101.258 115.893 115.491 1.00 44.08 N
ATOM 18 C4 U B1923 102.591 115.619 115.692 1.00 44.98 C
ATOM 19 O4 U B1923 102.906 114.704 116.455 1.00 46.97 O
ATOM 20 C5 U B1923 103.494 116.436 114.935 1.00 43.68 C
ATOM 21 C6 U B1923 103.009 117.364 114.106 1.00 42.64 C
ATOM 22 P A B1924 99.610 122.455 111.184 1.00 43.87 P
ATOM 23 OP1 A B1924 100.033 123.411 112.241 1.00 44.82 O
ATOM 24 OP2 A B1924 98.188 122.406 110.767 1.00 45.62 O
ATOM 25 O5' A B1924 100.499 122.699 109.884 1.00 42.80 O
TER
ATOM 2 P C A1948 113.228 122.211 116.769 1.00 52.17 P
ATOM 3 OP1 C A1948 114.648 121.807 116.662 1.00 53.50 O
ATOM 4 OP2 C A1948 112.480 122.580 115.540 1.00 51.52 O
ATOM 5 O5' C A1948 112.434 121.050 117.518 1.00 51.12 O
ATOM 6 C5' C A1948 112.903 120.538 118.777 1.00 51.08 C
ATOM 7 C4' C A1948 111.990 119.444 119.278 1.00 51.04 C
ATOM 8 O4' C A1948 110.678 119.983 119.569 1.00 49.96 O
ATOM 9 C3' C A1948 111.714 118.304 118.316 1.00 50.90 C
ATOM 10 O3' C A1948 112.765 117.345 118.341 1.00 52.87 O
ATOM 11 C2' C A1948 110.428 117.719 118.881 1.00 50.30 C
ATOM 12 O2' C A1948 110.662 116.851 119.963 1.00 51.57 O
ATOM 13 C1' C A1948 109.703 118.974 119.372 1.00 49.48 C
ATOM 14 N1 C A1948 108.693 119.458 118.414 1.00 49.19 N
ATOM 15 C2 C A1948 107.388 118.940 118.489 1.00 48.04 C
ATOM 16 O2 C A1948 107.108 118.129 119.389 1.00 46.09 O
ATOM 17 N3 C A1948 106.468 119.339 117.581 1.00 47.91 N
ATOM 18 C4 C A1948 106.800 120.220 116.635 1.00 47.86 C
ATOM 19 N4 C A1948 105.862 120.569 115.745 1.00 47.29 N
ATOM 20 C5 C A1948 108.108 120.782 116.555 1.00 48.11 C
ATOM 21 C6 C A1948 109.013 120.379 117.455 1.00 48.11 C
ATOM 22 P U A1949 113.106 116.497 117.020 1.00 55.40 P
ATOM 23 OP1 U A1949 113.860 115.291 117.434 1.00 55.32 O
ATOM 24 OP2 U A1949 113.698 117.424 116.019 1.00 54.70 O
ATOM 25 O5' U A1949 111.685 116.014 116.490 1.00 58.48 O
TER
ATOM 1 O3' G B1922 105.661 121.558 110.314 1.00 40.98 O
ATOM 2 P U B1923 105.095 121.362 111.802 1.00 40.86 P
ATOM 3 OP1 U B1923 104.179 122.492 112.087 1.00 41.20 O
ATOM 4 OP2 U B1923 106.229 121.091 112.716 1.00 42.31 O
ATOM 5 O5' U B1923 104.217 120.041 111.706 1.00 41.60 O
ATOM 6 C5' U B1923 103.341 119.828 110.592 1.00 41.26 C
ATOM 7 C4' U B1923 101.916 119.658 111.061 1.00 41.43 C
ATOM 8 O4' U B1923 101.763 118.380 111.738 1.00 41.60 O
ATOM 9 C3' U B1923 101.372 120.719 112.010 1.00 41.35 C
ATOM 10 O3' U B1923 100.026 120.985 111.670 1.00 42.87 O
ATOM 11 C2' U B1923 101.438 120.029 113.370 1.00 42.49 C
ATOM 12 O2' U B1923 100.455 120.492 114.276 1.00 42.64 O
ATOM 13 C1' U B1923 101.145 118.582 112.991 1.00 42.07 C
ATOM 14 N1 U B1923 101.658 117.578 113.937 1.00 43.24 N
ATOM 15 C2 U B1923 100.726 116.837 114.653 1.00 44.29 C
ATOM 16 O2 U B1923 99.521 117.005 114.557 1.00 44.27 O
ATOM 17 N3 U B1923 101.258 115.893 115.491 1.00 44.08 N
ATOM 18 C4 U B1923 102.591 115.619 115.692 1.00 44.98 C
ATOM 19 O4 U B1923 102.906 114.704 116.455 1.00 46.97 O
ATOM 20 C5 U B1923 103.494 116.436 114.935 1.00 43.68 C
ATOM 21 C6 U B1923 103.009 117.364 114.106 1.00 42.64 C
ATOM 22 P A B1924 99.610 122.455 111.184 1.00 43.87 P
ATOM 23 OP1 A B1924 100.033 123.411 112.241 1.00 44.82 O
ATOM 24 OP2 A B1924 98.188 122.406 110.767 1.00 45.62 O
ATOM 25 O5' A B1924 100.499 122.699 109.884 1.00 42.80 O
TER
Atoms:
C2: (107.388,118.940,118.489)
OP1: (114.648,121.807,116.662)
OP2: (112.480,122.580,115.540)
C4: (106.800,120.220,116.635)
O5': (112.434,121.050,117.518)
C3': (111.714,118.304,118.316)
C1': (109.703,118.974,119.372)
O4': (110.678,119.983,119.569)
C5': (112.903,120.538,118.777)
P: (113.228,122.211,116.769)
O2: (107.108,118.129,119.389)
C4': (111.990,119.444,119.278)
C2': (110.428,117.719,118.881)
O2': (110.662,116.851,119.963)
N1: (108.693,119.458,118.414)
N3: (106.468,119.339,117.581)
N4: (105.862,120.569,115.745)
C6: (109.013,120.379,117.455)
C5: (108.108,120.782,116.555)
O3': (112.765,117.345,118.341)
OP1: (114.648,121.807,116.662)
OP2: (112.480,122.580,115.540)
C4: (106.800,120.220,116.635)
O5': (112.434,121.050,117.518)
C3': (111.714,118.304,118.316)
C1': (109.703,118.974,119.372)
O4': (110.678,119.983,119.569)
C5': (112.903,120.538,118.777)
P: (113.228,122.211,116.769)
O2: (107.108,118.129,119.389)
C4': (111.990,119.444,119.278)
C2': (110.428,117.719,118.881)
O2': (110.662,116.851,119.963)
N1: (108.693,119.458,118.414)
N3: (106.468,119.339,117.581)
N4: (105.862,120.569,115.745)
C6: (109.013,120.379,117.455)
C5: (108.108,120.782,116.555)
O3': (112.765,117.345,118.341)
C4: (102.591,115.619,115.692)
N3: (101.258,115.893,115.491)
OP1: (104.179,122.492,112.087)
OP2: (106.229,121.091,112.716)
C2: (100.726,116.837,114.653)
C1': (101.145,118.582,112.991)
C3': (101.372,120.719,112.010)
O5': (104.217,120.041,111.706)
O4': (101.763,118.380,111.738)
C5': (103.341,119.828,110.592)
P: (105.095,121.362,111.802)
C4': (101.916,119.658,111.061)
C2': (101.438,120.029,113.370)
O2': (100.455,120.492,114.276)
N1: (101.658,117.578,113.937)
O4: (102.906,114.704,116.455)
O2: (99.521,117.005,114.557)
C6: (103.009,117.364,114.106)
C5: (103.494,116.436,114.935)
O3': (100.026,120.985,111.670)
N3: (101.258,115.893,115.491)
OP1: (104.179,122.492,112.087)
OP2: (106.229,121.091,112.716)
C2: (100.726,116.837,114.653)
C1': (101.145,118.582,112.991)
C3': (101.372,120.719,112.010)
O5': (104.217,120.041,111.706)
O4': (101.763,118.380,111.738)
C5': (103.341,119.828,110.592)
P: (105.095,121.362,111.802)
C4': (101.916,119.658,111.061)
C2': (101.438,120.029,113.370)
O2': (100.455,120.492,114.276)
N1: (101.658,117.578,113.937)
O4: (102.906,114.704,116.455)
O2: (99.521,117.005,114.557)
C6: (103.009,117.364,114.106)
C5: (103.494,116.436,114.935)
O3': (100.026,120.985,111.670)
Image (generated by PyMOL):