ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZFX:D8:D6

Extra

PDB:
ATOM 1 O3' A A 7 26.812 10.600 42.626 1.00 56.60 O
ATOM 2 P C A 8 25.430 9.972 42.081 1.00 60.68 P
ATOM 3 OP1 C A 8 25.306 8.559 42.550 1.00 58.97 O
ATOM 4 OP2 C A 8 25.466 10.256 40.627 1.00 54.92 O
ATOM 5 O5' C A 8 24.259 10.871 42.697 1.00 62.34 O
ATOM 6 C5' C A 8 23.613 11.890 41.916 1.00 64.63 C
ATOM 7 C4' C A 8 22.196 12.126 42.407 1.00 64.89 C
ATOM 8 O4' C A 8 21.486 10.865 42.366 1.00 65.59 O
ATOM 9 C3' C A 8 22.193 12.568 43.876 1.00 66.34 C
ATOM 10 O3' C A 8 21.139 13.479 44.188 1.00 63.35 O
ATOM 11 C2' C A 8 21.948 11.303 44.682 1.00 67.72 C
ATOM 12 O2' C A 8 21.086 11.561 45.771 1.00 73.27 O
ATOM 13 C1' C A 8 21.173 10.464 43.673 1.00 70.85 C
ATOM 14 N1 C A 8 21.263 9.027 43.795 1.00 74.83 N
ATOM 15 C2 C A 8 20.108 8.346 44.164 1.00 77.02 C
ATOM 16 O2 C A 8 19.051 8.991 44.301 1.00 79.52 O
ATOM 17 N3 C A 8 20.159 7.022 44.351 1.00 78.40 N
ATOM 18 C4 C A 8 21.308 6.371 44.169 1.00 79.03 C
ATOM 19 N4 C A 8 21.314 5.058 44.382 1.00 82.24 N
ATOM 20 C5 C A 8 22.501 7.037 43.762 1.00 77.96 C
ATOM 21 C6 C A 8 22.433 8.355 43.588 1.00 75.67 C
ATOM 22 P A A 9 21.301 15.043 43.947 1.00 64.75 P
ATOM 23 OP1 A A 9 20.118 15.632 44.632 1.00 64.55 O
ATOM 24 OP2 A A 9 21.521 15.289 42.489 1.00 63.11 O
ATOM 25 O5' A A 9 22.599 15.413 44.779 1.00 66.57 O
TER

ATOM 1 O3' G B 5 26.475 4.186 44.324 1.00 63.27 O
ATOM 2 P U B 6 25.097 4.405 45.090 1.00 65.94 P
ATOM 3 OP1 U B 6 25.027 3.389 46.176 1.00 62.15 O
ATOM 4 OP2 U B 6 24.044 4.454 44.045 1.00 66.28 O
ATOM 5 O5' U B 6 25.240 5.825 45.790 1.00 69.26 O
ATOM 6 C5' U B 6 24.349 6.171 46.827 1.00 64.14 C
ATOM 7 C4' U B 6 25.045 6.992 47.876 1.00 64.82 C
ATOM 8 O4' U B 6 26.217 6.292 48.376 1.00 65.51 O
ATOM 9 C3' U B 6 25.570 8.277 47.246 1.00 64.33 C
ATOM 10 O3' U B 6 25.230 9.418 48.008 1.00 60.20 O
ATOM 11 C2' U B 6 27.054 8.057 46.976 1.00 61.72 C
ATOM 12 O2' U B 6 27.863 9.182 47.261 1.00 64.98 O
ATOM 13 C1' U B 6 27.379 7.002 48.023 1.00 65.28 C
ATOM 14 N1 U B 6 28.482 6.093 47.731 1.00 68.39 N
ATOM 15 C2 U B 6 29.655 6.333 48.411 1.00 68.29 C
ATOM 16 O2 U B 6 29.754 7.196 49.269 1.00 68.14 O
ATOM 17 N3 U B 6 30.702 5.528 48.061 1.00 71.09 N
ATOM 18 C4 U B 6 30.688 4.518 47.123 1.00 72.41 C
ATOM 19 O4 U B 6 31.750 3.959 46.821 1.00 75.84 O
ATOM 20 C5 U B 6 29.413 4.305 46.495 1.00 71.12 C
ATOM 21 C6 U B 6 28.379 5.083 46.817 1.00 70.04 C
ATOM 22 P A B 7 24.337 10.563 47.367 1.00 67.53 P
ATOM 23 OP1 A B 7 24.510 11.710 48.291 1.00 68.33 O
ATOM 24 OP2 A B 7 22.979 10.054 47.061 1.00 66.91 O
ATOM 25 O5' A B 7 25.057 10.886 45.990 1.00 66.35 O
TER

Atoms:
C2: (20.108,8.346,44.164)
OP1: (25.306,8.559,42.550)
OP2: (25.466,10.256,40.627)
C4: (21.308,6.371,44.169)
O5': (24.259,10.871,42.697)
C3': (22.193,12.568,43.876)
C1': (21.173,10.464,43.673)
O4': (21.486,10.865,42.366)
C5': (23.613,11.890,41.916)
P: (25.430,9.972,42.081)
O2: (19.051,8.991,44.301)
C4': (22.196,12.126,42.407)
C2': (21.948,11.303,44.682)
O2': (21.086,11.561,45.771)
N1: (21.263,9.027,43.795)
N3: (20.159,7.022,44.351)
N4: (21.314,5.058,44.382)
C6: (22.433,8.355,43.588)
C5: (22.501,7.037,43.762)
O3': (21.139,13.479,44.188)
C4: (30.688,4.518,47.123)
N3: (30.702,5.528,48.061)
OP1: (25.027,3.389,46.176)
OP2: (24.044,4.454,44.045)
C2: (29.655,6.333,48.411)
C1': (27.379,7.002,48.023)
C3': (25.570,8.277,47.246)
O5': (25.240,5.825,45.790)
O4': (26.217,6.292,48.376)
C5': (24.349,6.171,46.827)
P: (25.097,4.405,45.090)
C4': (25.045,6.992,47.876)
C2': (27.054,8.057,46.976)
O2': (27.863,9.182,47.261)
N1: (28.482,6.093,47.731)
O4: (31.750,3.959,46.821)
O2: (29.754,7.196,49.269)
C6: (28.379,5.083,46.817)
C5: (29.413,4.305,46.495)
O3': (25.230,9.418,48.008)
Image (generated by PyMOL):
PyMOL image
show in jmol