Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DR9:B19:B18
Extra
PDB:
ATOM 1 O3' U A 18 -7.425 2.565 -14.383 1.00 61.36 O
ATOM 2 P C A 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 3 OP1 C A 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 4 OP2 C A 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 5 O5' C A 19 -8.384 0.510 -13.270 1.00 54.99 O
ATOM 6 C5' C A 19 -8.602 -0.365 -12.173 1.00 47.90 C
ATOM 7 C4' C A 19 -9.994 -0.918 -12.238 1.00 44.26 C
ATOM 8 O4' C A 19 -10.943 0.169 -12.097 1.00 43.12 O
ATOM 9 C3' C A 19 -10.342 -1.521 -13.583 1.00 42.66 C
ATOM 10 O3' C A 19 -9.850 -2.845 -13.682 1.00 39.97 O
ATOM 11 C2' C A 19 -11.859 -1.438 -13.582 1.00 42.89 C
ATOM 12 O2' C A 19 -12.483 -2.431 -12.796 1.00 45.56 O
ATOM 13 C1' C A 19 -12.069 -0.082 -12.915 1.00 42.14 C
ATOM 14 N1 C A 19 -12.179 1.002 -13.892 1.00 41.37 N
ATOM 15 C2 C A 19 -13.269 0.995 -14.763 1.00 42.48 C
ATOM 16 O2 C A 19 -14.076 0.047 -14.704 1.00 43.25 O
ATOM 17 N3 C A 19 -13.413 2.012 -15.647 1.00 40.46 N
ATOM 18 C4 C A 19 -12.515 2.997 -15.682 1.00 37.99 C
ATOM 19 N4 C A 19 -12.712 3.984 -16.552 1.00 39.70 N
ATOM 20 C5 C A 19 -11.380 3.014 -14.821 1.00 37.81 C
ATOM 21 C6 C A 19 -11.252 2.006 -13.949 1.00 39.67 C
ATOM 22 P C A 20 -9.345 -3.387 -15.100 1.00 39.26 P
ATOM 23 OP1 C A 20 -8.514 -4.596 -14.877 1.00 38.95 O
ATOM 24 OP2 C A 20 -8.781 -2.237 -15.858 1.00 37.36 O
ATOM 25 O5' C A 20 -10.701 -3.823 -15.811 1.00 40.16 O
TER
ATOM 1 O3' U B 17 -9.445 7.416 -17.796 1.00 68.38 O
ATOM 2 P U B 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 3 OP1 U B 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 4 OP2 U B 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 5 O5' U B 18 -8.590 5.772 -16.041 1.00 64.32 O
ATOM 6 C5' U B 18 -7.433 4.997 -16.294 1.00 64.11 C
ATOM 7 C4' U B 18 -6.704 4.723 -15.012 1.00 64.37 C
ATOM 8 O4' U B 18 -6.373 5.979 -14.377 1.00 64.92 O
ATOM 9 C3' U B 18 -7.472 3.942 -13.960 1.00 63.44 C
ATOM 10 O3' U B 18 -7.425 2.565 -14.383 1.00 61.36 O
ATOM 11 C2' U B 18 -6.753 4.356 -12.674 1.00 64.79 C
ATOM 12 O2' U B 18 -5.529 3.683 -12.457 1.00 68.37 O
ATOM 13 C1' U B 18 -6.389 5.814 -12.976 1.00 65.55 C
ATOM 14 N1 U B 18 -7.263 6.844 -12.403 1.00 66.69 N
ATOM 15 C2 U B 18 -7.274 6.981 -11.034 1.00 67.35 C
ATOM 16 O2 U B 18 -6.604 6.278 -10.296 1.00 67.25 O
ATOM 17 N3 U B 18 -8.097 7.972 -10.558 1.00 68.24 N
ATOM 18 C4 U B 18 -8.893 8.820 -11.301 1.00 68.41 C
ATOM 19 O4 U B 18 -9.607 9.641 -10.722 1.00 69.38 O
ATOM 20 C5 U B 18 -8.825 8.615 -12.716 1.00 67.64 C
ATOM 21 C6 U B 18 -8.035 7.656 -13.206 1.00 67.08 C
ATOM 22 P C B 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 23 OP1 C B 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 24 OP2 C B 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 25 O5' C B 19 -8.384 0.510 -13.270 1.00 54.99 O
TER
ATOM 2 P C A 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 3 OP1 C A 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 4 OP2 C A 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 5 O5' C A 19 -8.384 0.510 -13.270 1.00 54.99 O
ATOM 6 C5' C A 19 -8.602 -0.365 -12.173 1.00 47.90 C
ATOM 7 C4' C A 19 -9.994 -0.918 -12.238 1.00 44.26 C
ATOM 8 O4' C A 19 -10.943 0.169 -12.097 1.00 43.12 O
ATOM 9 C3' C A 19 -10.342 -1.521 -13.583 1.00 42.66 C
ATOM 10 O3' C A 19 -9.850 -2.845 -13.682 1.00 39.97 O
ATOM 11 C2' C A 19 -11.859 -1.438 -13.582 1.00 42.89 C
ATOM 12 O2' C A 19 -12.483 -2.431 -12.796 1.00 45.56 O
ATOM 13 C1' C A 19 -12.069 -0.082 -12.915 1.00 42.14 C
ATOM 14 N1 C A 19 -12.179 1.002 -13.892 1.00 41.37 N
ATOM 15 C2 C A 19 -13.269 0.995 -14.763 1.00 42.48 C
ATOM 16 O2 C A 19 -14.076 0.047 -14.704 1.00 43.25 O
ATOM 17 N3 C A 19 -13.413 2.012 -15.647 1.00 40.46 N
ATOM 18 C4 C A 19 -12.515 2.997 -15.682 1.00 37.99 C
ATOM 19 N4 C A 19 -12.712 3.984 -16.552 1.00 39.70 N
ATOM 20 C5 C A 19 -11.380 3.014 -14.821 1.00 37.81 C
ATOM 21 C6 C A 19 -11.252 2.006 -13.949 1.00 39.67 C
ATOM 22 P C A 20 -9.345 -3.387 -15.100 1.00 39.26 P
ATOM 23 OP1 C A 20 -8.514 -4.596 -14.877 1.00 38.95 O
ATOM 24 OP2 C A 20 -8.781 -2.237 -15.858 1.00 37.36 O
ATOM 25 O5' C A 20 -10.701 -3.823 -15.811 1.00 40.16 O
TER
ATOM 1 O3' U B 17 -9.445 7.416 -17.796 1.00 68.38 O
ATOM 2 P U B 18 -9.694 5.941 -17.169 1.00 65.59 P
ATOM 3 OP1 U B 18 -9.408 4.919 -18.212 1.00 64.84 O
ATOM 4 OP2 U B 18 -11.020 5.950 -16.512 1.00 65.82 O
ATOM 5 O5' U B 18 -8.590 5.772 -16.041 1.00 64.32 O
ATOM 6 C5' U B 18 -7.433 4.997 -16.294 1.00 64.11 C
ATOM 7 C4' U B 18 -6.704 4.723 -15.012 1.00 64.37 C
ATOM 8 O4' U B 18 -6.373 5.979 -14.377 1.00 64.92 O
ATOM 9 C3' U B 18 -7.472 3.942 -13.960 1.00 63.44 C
ATOM 10 O3' U B 18 -7.425 2.565 -14.383 1.00 61.36 O
ATOM 11 C2' U B 18 -6.753 4.356 -12.674 1.00 64.79 C
ATOM 12 O2' U B 18 -5.529 3.683 -12.457 1.00 68.37 O
ATOM 13 C1' U B 18 -6.389 5.814 -12.976 1.00 65.55 C
ATOM 14 N1 U B 18 -7.263 6.844 -12.403 1.00 66.69 N
ATOM 15 C2 U B 18 -7.274 6.981 -11.034 1.00 67.35 C
ATOM 16 O2 U B 18 -6.604 6.278 -10.296 1.00 67.25 O
ATOM 17 N3 U B 18 -8.097 7.972 -10.558 1.00 68.24 N
ATOM 18 C4 U B 18 -8.893 8.820 -11.301 1.00 68.41 C
ATOM 19 O4 U B 18 -9.607 9.641 -10.722 1.00 69.38 O
ATOM 20 C5 U B 18 -8.825 8.615 -12.716 1.00 67.64 C
ATOM 21 C6 U B 18 -8.035 7.656 -13.206 1.00 67.08 C
ATOM 22 P C B 19 -7.053 1.369 -13.363 1.00 57.37 P
ATOM 23 OP1 C B 19 -6.767 1.836 -11.987 1.00 60.65 O
ATOM 24 OP2 C B 19 -6.059 0.525 -14.070 1.00 56.18 O
ATOM 25 O5' C B 19 -8.384 0.510 -13.270 1.00 54.99 O
TER
Atoms:
C2: (-13.269,0.995,-14.763)
OP1: (-6.767,1.836,-11.987)
OP2: (-6.059,0.525,-14.070)
C4: (-12.515,2.997,-15.682)
O5': (-8.384,0.510,-13.270)
C3': (-10.342,-1.521,-13.583)
C1': (-12.069,-0.082,-12.915)
O4': (-10.943,0.169,-12.097)
C5': (-8.602,-0.365,-12.173)
P: (-7.053,1.369,-13.363)
O2: (-14.076,0.047,-14.704)
C4': (-9.994,-0.918,-12.238)
C2': (-11.859,-1.438,-13.582)
O2': (-12.483,-2.431,-12.796)
N1: (-12.179,1.002,-13.892)
N3: (-13.413,2.012,-15.647)
N4: (-12.712,3.984,-16.552)
C6: (-11.252,2.006,-13.949)
C5: (-11.380,3.014,-14.821)
O3': (-9.850,-2.845,-13.682)
OP1: (-6.767,1.836,-11.987)
OP2: (-6.059,0.525,-14.070)
C4: (-12.515,2.997,-15.682)
O5': (-8.384,0.510,-13.270)
C3': (-10.342,-1.521,-13.583)
C1': (-12.069,-0.082,-12.915)
O4': (-10.943,0.169,-12.097)
C5': (-8.602,-0.365,-12.173)
P: (-7.053,1.369,-13.363)
O2: (-14.076,0.047,-14.704)
C4': (-9.994,-0.918,-12.238)
C2': (-11.859,-1.438,-13.582)
O2': (-12.483,-2.431,-12.796)
N1: (-12.179,1.002,-13.892)
N3: (-13.413,2.012,-15.647)
N4: (-12.712,3.984,-16.552)
C6: (-11.252,2.006,-13.949)
C5: (-11.380,3.014,-14.821)
O3': (-9.850,-2.845,-13.682)
C4: (-8.893,8.820,-11.301)
N3: (-8.097,7.972,-10.558)
OP1: (-9.408,4.919,-18.212)
OP2: (-11.020,5.950,-16.512)
C2: (-7.274,6.981,-11.034)
C1': (-6.389,5.814,-12.976)
C3': (-7.472,3.942,-13.960)
O5': (-8.590,5.772,-16.041)
O4': (-6.373,5.979,-14.377)
C5': (-7.433,4.997,-16.294)
P: (-9.694,5.941,-17.169)
C4': (-6.704,4.723,-15.012)
C2': (-6.753,4.356,-12.674)
O2': (-5.529,3.683,-12.457)
N1: (-7.263,6.844,-12.403)
O4: (-9.607,9.641,-10.722)
O2: (-6.604,6.278,-10.296)
C6: (-8.035,7.656,-13.206)
C5: (-8.825,8.615,-12.716)
O3': (-7.425,2.565,-14.383)
N3: (-8.097,7.972,-10.558)
OP1: (-9.408,4.919,-18.212)
OP2: (-11.020,5.950,-16.512)
C2: (-7.274,6.981,-11.034)
C1': (-6.389,5.814,-12.976)
C3': (-7.472,3.942,-13.960)
O5': (-8.590,5.772,-16.041)
O4': (-6.373,5.979,-14.377)
C5': (-7.433,4.997,-16.294)
P: (-9.694,5.941,-17.169)
C4': (-6.704,4.723,-15.012)
C2': (-6.753,4.356,-12.674)
O2': (-5.529,3.683,-12.457)
N1: (-7.263,6.844,-12.403)
O4: (-9.607,9.641,-10.722)
O2: (-6.604,6.278,-10.296)
C6: (-8.035,7.656,-13.206)
C5: (-8.825,8.615,-12.716)
O3': (-7.425,2.565,-14.383)
Image (generated by PyMOL):