ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2DXI:D59:D58

Extra

PDB:
ATOM 1 O3' U A 58 63.581 76.994 112.590 1.00 68.88 O
ATOM 2 P C A 59 64.329 78.357 112.967 1.00 73.11 P
ATOM 3 OP1 C A 59 65.384 78.565 111.943 1.00 73.59 O
ATOM 4 OP2 C A 59 64.690 78.314 114.406 1.00 56.57 O
ATOM 5 O5' C A 59 63.210 79.469 112.754 1.00 77.61 O
ATOM 6 C5' C A 59 63.067 80.129 111.500 1.00 75.06 C
ATOM 7 C4' C A 59 62.181 81.336 111.656 1.00 77.51 C
ATOM 8 O4' C A 59 60.808 80.901 111.850 1.00 78.36 O
ATOM 9 C3' C A 59 62.483 82.188 112.881 1.00 82.38 C
ATOM 10 O3' C A 59 63.561 83.097 112.651 1.00 82.11 O
ATOM 11 C2' C A 59 61.149 82.890 113.104 1.00 84.50 C
ATOM 12 O2' C A 59 60.947 83.964 112.206 1.00 87.89 O
ATOM 13 C1' C A 59 60.163 81.763 112.780 1.00 85.09 C
ATOM 14 N1 C A 59 59.798 80.974 113.969 1.00 82.53 N
ATOM 15 C2 C A 59 59.030 81.577 114.972 1.00 81.95 C
ATOM 16 O2 C A 59 58.649 82.745 114.818 1.00 85.73 O
ATOM 17 N3 C A 59 58.721 80.871 116.082 1.00 82.56 N
ATOM 18 C4 C A 59 59.139 79.609 116.209 1.00 81.08 C
ATOM 19 N4 C A 59 58.816 78.951 117.328 1.00 73.37 N
ATOM 20 C5 C A 59 59.907 78.965 115.195 1.00 81.83 C
ATOM 21 C6 C A 59 60.211 79.677 114.102 1.00 81.64 C
ATOM 22 P C A 60 64.492 83.570 113.885 1.00 80.44 P
ATOM 23 OP1 C A 60 65.685 84.238 113.314 1.00 83.66 O
ATOM 24 OP2 C A 60 64.669 82.443 114.831 1.00 82.25 O
ATOM 25 O5' C A 60 63.626 84.679 114.627 1.00 85.50 O
TER

ATOM 1 O3' U B 57 61.671 74.585 119.177 1.00 76.02 O
ATOM 2 P U B 58 61.417 75.914 118.309 1.00 75.63 P
ATOM 3 OP1 U B 58 62.044 77.023 119.074 1.00 67.60 O
ATOM 4 OP2 U B 58 59.984 75.992 117.943 1.00 67.08 O
ATOM 5 O5' U B 58 62.237 75.656 116.966 1.00 71.60 O
ATOM 6 C5' U B 58 61.980 76.413 115.792 1.00 66.77 C
ATOM 7 C4' U B 58 62.764 75.852 114.635 1.00 67.54 C
ATOM 8 O4' U B 58 62.365 74.476 114.439 1.00 61.77 O
ATOM 9 C3' U B 58 62.444 76.577 113.336 1.00 69.10 C
ATOM 10 O3' U B 58 63.581 76.994 112.590 1.00 68.88 O
ATOM 11 C2' U B 58 61.407 75.725 112.610 1.00 71.01 C
ATOM 12 O2' U B 58 61.666 75.640 111.218 1.00 74.71 O
ATOM 13 C1' U B 58 61.640 74.343 113.233 1.00 71.38 C
ATOM 14 N1 U B 58 60.435 73.546 113.492 1.00 66.56 N
ATOM 15 C2 U B 58 59.921 72.818 112.438 1.00 65.67 C
ATOM 16 O2 U B 58 60.427 72.817 111.330 1.00 62.39 O
ATOM 17 N3 U B 58 58.794 72.091 112.732 1.00 65.74 N
ATOM 18 C4 U B 58 58.147 72.026 113.947 1.00 65.37 C
ATOM 19 O4 U B 58 57.112 71.368 114.044 1.00 72.92 O
ATOM 20 C5 U B 58 58.749 72.803 114.989 1.00 67.08 C
ATOM 21 C6 U B 58 59.844 73.520 114.730 1.00 66.53 C
ATOM 22 P C B 59 64.329 78.357 112.967 1.00 73.11 P
ATOM 23 OP1 C B 59 65.384 78.565 111.943 1.00 73.59 O
ATOM 24 OP2 C B 59 64.690 78.314 114.406 1.00 56.57 O
ATOM 25 O5' C B 59 63.210 79.469 112.754 1.00 77.61 O
TER

Atoms:
C2: (59.030,81.577,114.972)
OP1: (65.384,78.565,111.943)
OP2: (64.690,78.314,114.406)
C4: (59.139,79.609,116.209)
O5': (63.210,79.469,112.754)
C3': (62.483,82.188,112.881)
C1': (60.163,81.763,112.780)
O4': (60.808,80.901,111.850)
C5': (63.067,80.129,111.500)
P: (64.329,78.357,112.967)
O2: (58.649,82.745,114.818)
C4': (62.181,81.336,111.656)
C2': (61.149,82.890,113.104)
O2': (60.947,83.964,112.206)
N1: (59.798,80.974,113.969)
N3: (58.721,80.871,116.082)
N4: (58.816,78.951,117.328)
C6: (60.211,79.677,114.102)
C5: (59.907,78.965,115.195)
O3': (63.561,83.097,112.651)
C4: (58.147,72.026,113.947)
N3: (58.794,72.091,112.732)
OP1: (62.044,77.023,119.074)
OP2: (59.984,75.992,117.943)
C2: (59.921,72.818,112.438)
C1': (61.640,74.343,113.233)
C3': (62.444,76.577,113.336)
O5': (62.237,75.656,116.966)
O4': (62.365,74.476,114.439)
C5': (61.980,76.413,115.792)
P: (61.417,75.914,118.309)
C4': (62.764,75.852,114.635)
C2': (61.407,75.725,112.610)
O2': (61.666,75.640,111.218)
N1: (60.435,73.546,113.492)
O4: (57.112,71.368,114.044)
O2: (60.427,72.817,111.330)
C6: (59.844,73.520,114.730)
C5: (58.749,72.803,114.989)
O3': (63.581,76.994,112.590)
Image (generated by PyMOL):
PyMOL image
show in jmol