Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1881:A1856
Extra
PDB:
ATOM 1 O3' G A1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 2 P C A1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 3 OP1 C A1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 4 OP2 C A1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 5 O5' C A1881 -38.686 114.513 133.485 1.00 13.46 O
ATOM 6 C5' C A1881 -40.051 114.219 133.225 1.00 13.46 C
ATOM 7 C4' C A1881 -40.920 114.755 134.330 1.00 13.46 C
ATOM 8 O4' C A1881 -40.484 114.198 135.598 1.00 13.46 O
ATOM 9 C3' C A1881 -40.882 116.259 134.549 1.00 13.46 C
ATOM 10 O3' C A1881 -41.737 116.974 133.657 1.00 13.46 O
ATOM 11 C2' C A1881 -41.321 116.399 136.002 1.00 13.46 C
ATOM 12 O2' C A1881 -42.724 116.440 136.160 1.00 13.46 O
ATOM 13 C1' C A1881 -40.734 115.131 136.636 1.00 13.46 C
ATOM 14 N1 C A1881 -39.469 115.416 137.332 1.00 27.38 N
ATOM 15 C2 C A1881 -39.489 115.674 138.713 1.00 27.38 C
ATOM 16 O2 C A1881 -40.550 115.591 139.334 1.00 27.38 O
ATOM 17 N3 C A1881 -38.350 116.006 139.334 1.00 27.38 N
ATOM 18 C4 C A1881 -37.212 116.077 138.642 1.00 27.38 C
ATOM 19 N4 C A1881 -36.102 116.428 139.296 1.00 27.38 N
ATOM 20 C5 C A1881 -37.155 115.794 137.249 1.00 27.38 C
ATOM 21 C6 C A1881 -38.293 115.465 136.641 1.00 27.38 C
ATOM 22 P A A1882 -41.161 118.261 132.892 1.00 25.82 P
ATOM 23 OP1 A A1882 -41.091 119.368 133.870 1.00 44.36 O
ATOM 24 OP2 A A1882 -41.896 118.454 131.623 1.00 44.36 O
ATOM 25 O5' A A1882 -39.672 117.828 132.545 1.00 5.27 O
TER
ATOM 1 O3' U B1855 -31.584 115.525 137.190 1.00 9.26 O
ATOM 2 P U B1856 -32.487 115.383 138.517 1.00 8.38 P
ATOM 3 OP1 U B1856 -33.631 116.308 138.371 1.00 8.38 O
ATOM 4 OP2 U B1856 -31.568 115.511 139.677 1.00 8.38 O
ATOM 5 O5' U B1856 -33.091 113.911 138.476 1.00 23.89 O
ATOM 6 C5' U B1856 -34.016 113.514 137.437 1.00 23.89 C
ATOM 7 C4' U B1856 -34.796 112.273 137.853 1.00 23.89 C
ATOM 8 O4' U B1856 -35.494 111.748 136.683 1.00 23.89 O
ATOM 9 C3' U B1856 -33.921 111.135 138.368 1.00 23.89 C
ATOM 10 O3' U B1856 -34.620 110.370 139.358 1.00 23.89 O
ATOM 11 C2' U B1856 -33.709 110.287 137.121 1.00 23.89 C
ATOM 12 O2' U B1856 -33.400 108.939 137.402 1.00 23.89 O
ATOM 13 C1' U B1856 -35.050 110.442 136.402 1.00 23.89 C
ATOM 14 N1 U B1856 -34.947 110.284 134.943 1.00 23.77 N
ATOM 15 C2 U B1856 -35.846 109.451 134.315 1.00 23.77 C
ATOM 16 O2 U B1856 -36.755 108.917 134.890 1.00 23.77 O
ATOM 17 N3 U B1856 -35.638 109.271 132.977 1.00 23.77 N
ATOM 18 C4 U B1856 -34.645 109.837 132.211 1.00 23.77 C
ATOM 19 O4 U B1856 -34.466 109.434 131.060 1.00 23.77 O
ATOM 20 C5 U B1856 -33.788 110.733 132.918 1.00 23.77 C
ATOM 21 C6 U B1856 -33.964 110.921 134.226 1.00 23.77 C
ATOM 22 P C B1857 -34.673 110.882 140.884 1.00 38.21 P
ATOM 23 OP1 C B1857 -33.625 111.924 141.062 1.00 65.37 O
ATOM 24 OP2 C B1857 -34.682 109.701 141.776 1.00 65.37 O
ATOM 25 O5' C B1857 -36.103 111.575 140.981 1.00 24.04 O
TER
ATOM 2 P C A1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 3 OP1 C A1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 4 OP2 C A1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 5 O5' C A1881 -38.686 114.513 133.485 1.00 13.46 O
ATOM 6 C5' C A1881 -40.051 114.219 133.225 1.00 13.46 C
ATOM 7 C4' C A1881 -40.920 114.755 134.330 1.00 13.46 C
ATOM 8 O4' C A1881 -40.484 114.198 135.598 1.00 13.46 O
ATOM 9 C3' C A1881 -40.882 116.259 134.549 1.00 13.46 C
ATOM 10 O3' C A1881 -41.737 116.974 133.657 1.00 13.46 O
ATOM 11 C2' C A1881 -41.321 116.399 136.002 1.00 13.46 C
ATOM 12 O2' C A1881 -42.724 116.440 136.160 1.00 13.46 O
ATOM 13 C1' C A1881 -40.734 115.131 136.636 1.00 13.46 C
ATOM 14 N1 C A1881 -39.469 115.416 137.332 1.00 27.38 N
ATOM 15 C2 C A1881 -39.489 115.674 138.713 1.00 27.38 C
ATOM 16 O2 C A1881 -40.550 115.591 139.334 1.00 27.38 O
ATOM 17 N3 C A1881 -38.350 116.006 139.334 1.00 27.38 N
ATOM 18 C4 C A1881 -37.212 116.077 138.642 1.00 27.38 C
ATOM 19 N4 C A1881 -36.102 116.428 139.296 1.00 27.38 N
ATOM 20 C5 C A1881 -37.155 115.794 137.249 1.00 27.38 C
ATOM 21 C6 C A1881 -38.293 115.465 136.641 1.00 27.38 C
ATOM 22 P A A1882 -41.161 118.261 132.892 1.00 25.82 P
ATOM 23 OP1 A A1882 -41.091 119.368 133.870 1.00 44.36 O
ATOM 24 OP2 A A1882 -41.896 118.454 131.623 1.00 44.36 O
ATOM 25 O5' A A1882 -39.672 117.828 132.545 1.00 5.27 O
TER
ATOM 1 O3' U B1855 -31.584 115.525 137.190 1.00 9.26 O
ATOM 2 P U B1856 -32.487 115.383 138.517 1.00 8.38 P
ATOM 3 OP1 U B1856 -33.631 116.308 138.371 1.00 8.38 O
ATOM 4 OP2 U B1856 -31.568 115.511 139.677 1.00 8.38 O
ATOM 5 O5' U B1856 -33.091 113.911 138.476 1.00 23.89 O
ATOM 6 C5' U B1856 -34.016 113.514 137.437 1.00 23.89 C
ATOM 7 C4' U B1856 -34.796 112.273 137.853 1.00 23.89 C
ATOM 8 O4' U B1856 -35.494 111.748 136.683 1.00 23.89 O
ATOM 9 C3' U B1856 -33.921 111.135 138.368 1.00 23.89 C
ATOM 10 O3' U B1856 -34.620 110.370 139.358 1.00 23.89 O
ATOM 11 C2' U B1856 -33.709 110.287 137.121 1.00 23.89 C
ATOM 12 O2' U B1856 -33.400 108.939 137.402 1.00 23.89 O
ATOM 13 C1' U B1856 -35.050 110.442 136.402 1.00 23.89 C
ATOM 14 N1 U B1856 -34.947 110.284 134.943 1.00 23.77 N
ATOM 15 C2 U B1856 -35.846 109.451 134.315 1.00 23.77 C
ATOM 16 O2 U B1856 -36.755 108.917 134.890 1.00 23.77 O
ATOM 17 N3 U B1856 -35.638 109.271 132.977 1.00 23.77 N
ATOM 18 C4 U B1856 -34.645 109.837 132.211 1.00 23.77 C
ATOM 19 O4 U B1856 -34.466 109.434 131.060 1.00 23.77 O
ATOM 20 C5 U B1856 -33.788 110.733 132.918 1.00 23.77 C
ATOM 21 C6 U B1856 -33.964 110.921 134.226 1.00 23.77 C
ATOM 22 P C B1857 -34.673 110.882 140.884 1.00 38.21 P
ATOM 23 OP1 C B1857 -33.625 111.924 141.062 1.00 65.37 O
ATOM 24 OP2 C B1857 -34.682 109.701 141.776 1.00 65.37 O
ATOM 25 O5' C B1857 -36.103 111.575 140.981 1.00 24.04 O
TER
Atoms:
C2: (-39.489,115.674,138.713)
OP1: (-36.343,113.747,133.940)
OP2: (-38.160,112.108,133.142)
C4: (-37.212,116.077,138.642)
O5': (-38.686,114.513,133.485)
C3': (-40.882,116.259,134.549)
C1': (-40.734,115.131,136.636)
O4': (-40.484,114.198,135.598)
C5': (-40.051,114.219,133.225)
P: (-37.554,113.459,133.123)
O2: (-40.550,115.591,139.334)
C4': (-40.920,114.755,134.330)
C2': (-41.321,116.399,136.002)
O2': (-42.724,116.440,136.160)
N1: (-39.469,115.416,137.332)
N3: (-38.350,116.006,139.334)
N4: (-36.102,116.428,139.296)
C6: (-38.293,115.465,136.641)
C5: (-37.155,115.794,137.249)
O3': (-41.737,116.974,133.657)
OP1: (-36.343,113.747,133.940)
OP2: (-38.160,112.108,133.142)
C4: (-37.212,116.077,138.642)
O5': (-38.686,114.513,133.485)
C3': (-40.882,116.259,134.549)
C1': (-40.734,115.131,136.636)
O4': (-40.484,114.198,135.598)
C5': (-40.051,114.219,133.225)
P: (-37.554,113.459,133.123)
O2: (-40.550,115.591,139.334)
C4': (-40.920,114.755,134.330)
C2': (-41.321,116.399,136.002)
O2': (-42.724,116.440,136.160)
N1: (-39.469,115.416,137.332)
N3: (-38.350,116.006,139.334)
N4: (-36.102,116.428,139.296)
C6: (-38.293,115.465,136.641)
C5: (-37.155,115.794,137.249)
O3': (-41.737,116.974,133.657)
C4: (-34.645,109.837,132.211)
N3: (-35.638,109.271,132.977)
OP1: (-33.631,116.308,138.371)
OP2: (-31.568,115.511,139.677)
C2: (-35.846,109.451,134.315)
C1': (-35.050,110.442,136.402)
C3': (-33.921,111.135,138.368)
O5': (-33.091,113.911,138.476)
O4': (-35.494,111.748,136.683)
C5': (-34.016,113.514,137.437)
P: (-32.487,115.383,138.517)
C4': (-34.796,112.273,137.853)
C2': (-33.709,110.287,137.121)
O2': (-33.400,108.939,137.402)
N1: (-34.947,110.284,134.943)
O4: (-34.466,109.434,131.060)
O2: (-36.755,108.917,134.890)
C6: (-33.964,110.921,134.226)
C5: (-33.788,110.733,132.918)
O3': (-34.620,110.370,139.358)
N3: (-35.638,109.271,132.977)
OP1: (-33.631,116.308,138.371)
OP2: (-31.568,115.511,139.677)
C2: (-35.846,109.451,134.315)
C1': (-35.050,110.442,136.402)
C3': (-33.921,111.135,138.368)
O5': (-33.091,113.911,138.476)
O4': (-35.494,111.748,136.683)
C5': (-34.016,113.514,137.437)
P: (-32.487,115.383,138.517)
C4': (-34.796,112.273,137.853)
C2': (-33.709,110.287,137.121)
O2': (-33.400,108.939,137.402)
N1: (-34.947,110.284,134.943)
O4: (-34.466,109.434,131.060)
O2: (-36.755,108.917,134.890)
C6: (-33.964,110.921,134.226)
C5: (-33.788,110.733,132.918)
O3': (-34.620,110.370,139.358)
Image (generated by PyMOL):