Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:B42:B40
Extra
PDB:
ATOM 1 O3' C A 41 -113.136 159.892 130.405 1.00 27.50 O
ATOM 2 P C A 42 -114.059 160.553 131.542 1.00 36.17 P
ATOM 3 OP1 C A 42 -114.366 161.947 131.103 1.00 38.11 O
ATOM 4 OP2 C A 42 -113.460 160.315 132.889 1.00 38.01 O
ATOM 5 O5' C A 42 -115.385 159.690 131.463 1.00 23.66 O
ATOM 6 C5' C A 42 -116.334 159.701 132.530 1.00 23.66 C
ATOM 7 C4' C A 42 -117.070 158.395 132.552 1.00 23.66 C
ATOM 8 O4' C A 42 -116.091 157.332 132.598 1.00 23.66 O
ATOM 9 C3' C A 42 -117.979 158.180 133.752 1.00 23.66 C
ATOM 10 O3' C A 42 -119.290 158.662 133.470 1.00 23.66 O
ATOM 11 C2' C A 42 -117.974 156.660 133.911 1.00 23.66 C
ATOM 12 O2' C A 42 -118.942 156.006 133.109 1.00 23.66 O
ATOM 13 C1' C A 42 -116.564 156.290 133.428 1.00 23.66 C
ATOM 14 N1 C A 42 -115.586 156.083 134.512 1.00 53.38 N
ATOM 15 C2 C A 42 -115.813 155.065 135.444 1.00 53.33 C
ATOM 16 O2 C A 42 -116.836 154.362 135.335 1.00 53.31 O
ATOM 17 N3 C A 42 -114.917 154.870 136.437 1.00 53.32 N
ATOM 18 C4 C A 42 -113.831 155.641 136.518 1.00 53.36 C
ATOM 19 N4 C A 42 -112.970 155.406 137.511 1.00 53.36 N
ATOM 20 C5 C A 42 -113.578 156.683 135.587 1.00 53.36 C
ATOM 21 C6 C A 42 -114.471 156.869 134.611 1.00 53.37 C
ATOM 22 P G A 43 -119.750 160.099 134.013 1.00 55.48 P
ATOM 23 OP1 G A 43 -120.742 160.601 133.024 1.00 20.59 O
ATOM 24 OP2 G A 43 -118.552 160.914 134.324 1.00 20.58 O
ATOM 25 O5' G A 43 -120.500 159.779 135.383 1.00 61.87 O
TER
ATOM 1 O3' U B 39 -109.221 159.169 137.395 1.00 85.23 O
ATOM 2 P U B 40 -108.905 157.832 136.558 1.00 49.24 P
ATOM 3 OP1 U B 40 -110.184 157.113 136.344 1.00 36.59 O
ATOM 4 OP2 U B 40 -107.795 157.146 137.270 1.00 36.68 O
ATOM 5 O5' U B 40 -108.343 158.341 135.147 1.00 42.88 O
ATOM 6 C5' U B 40 -107.627 159.590 135.043 1.00 42.88 C
ATOM 7 C4' U B 40 -106.628 159.572 133.900 1.00 42.88 C
ATOM 8 O4' U B 40 -105.618 158.556 134.112 1.00 42.88 O
ATOM 9 C3' U B 40 -107.123 159.310 132.490 1.00 42.88 C
ATOM 10 O3' U B 40 -107.667 160.514 131.961 1.00 42.88 O
ATOM 11 C2' U B 40 -105.839 158.895 131.757 1.00 42.88 C
ATOM 12 O2' U B 40 -105.100 159.991 131.242 1.00 42.88 O
ATOM 13 C1' U B 40 -105.011 158.247 132.872 1.00 42.88 C
ATOM 14 N1 U B 40 -104.806 156.792 132.778 1.00134.08 N
ATOM 15 C2 U B 40 -103.600 156.341 132.258 1.00134.06 C
ATOM 16 O2 U B 40 -102.726 157.088 131.849 1.00134.04 O
ATOM 17 N3 U B 40 -103.457 154.977 132.232 1.00134.05 N
ATOM 18 C4 U B 40 -104.375 154.037 132.654 1.00134.03 C
ATOM 19 O4 U B 40 -104.082 152.840 132.605 1.00134.05 O
ATOM 20 C5 U B 40 -105.598 154.580 133.157 1.00133.98 C
ATOM 21 C6 U B 40 -105.768 155.904 133.201 1.00134.01 C
ATOM 22 P C B 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 23 OP1 C B 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 24 OP2 C B 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 25 O5' C B 41 -109.418 159.354 130.517 1.00 27.50 O
TER
ATOM 2 P C A 42 -114.059 160.553 131.542 1.00 36.17 P
ATOM 3 OP1 C A 42 -114.366 161.947 131.103 1.00 38.11 O
ATOM 4 OP2 C A 42 -113.460 160.315 132.889 1.00 38.01 O
ATOM 5 O5' C A 42 -115.385 159.690 131.463 1.00 23.66 O
ATOM 6 C5' C A 42 -116.334 159.701 132.530 1.00 23.66 C
ATOM 7 C4' C A 42 -117.070 158.395 132.552 1.00 23.66 C
ATOM 8 O4' C A 42 -116.091 157.332 132.598 1.00 23.66 O
ATOM 9 C3' C A 42 -117.979 158.180 133.752 1.00 23.66 C
ATOM 10 O3' C A 42 -119.290 158.662 133.470 1.00 23.66 O
ATOM 11 C2' C A 42 -117.974 156.660 133.911 1.00 23.66 C
ATOM 12 O2' C A 42 -118.942 156.006 133.109 1.00 23.66 O
ATOM 13 C1' C A 42 -116.564 156.290 133.428 1.00 23.66 C
ATOM 14 N1 C A 42 -115.586 156.083 134.512 1.00 53.38 N
ATOM 15 C2 C A 42 -115.813 155.065 135.444 1.00 53.33 C
ATOM 16 O2 C A 42 -116.836 154.362 135.335 1.00 53.31 O
ATOM 17 N3 C A 42 -114.917 154.870 136.437 1.00 53.32 N
ATOM 18 C4 C A 42 -113.831 155.641 136.518 1.00 53.36 C
ATOM 19 N4 C A 42 -112.970 155.406 137.511 1.00 53.36 N
ATOM 20 C5 C A 42 -113.578 156.683 135.587 1.00 53.36 C
ATOM 21 C6 C A 42 -114.471 156.869 134.611 1.00 53.37 C
ATOM 22 P G A 43 -119.750 160.099 134.013 1.00 55.48 P
ATOM 23 OP1 G A 43 -120.742 160.601 133.024 1.00 20.59 O
ATOM 24 OP2 G A 43 -118.552 160.914 134.324 1.00 20.58 O
ATOM 25 O5' G A 43 -120.500 159.779 135.383 1.00 61.87 O
TER
ATOM 1 O3' U B 39 -109.221 159.169 137.395 1.00 85.23 O
ATOM 2 P U B 40 -108.905 157.832 136.558 1.00 49.24 P
ATOM 3 OP1 U B 40 -110.184 157.113 136.344 1.00 36.59 O
ATOM 4 OP2 U B 40 -107.795 157.146 137.270 1.00 36.68 O
ATOM 5 O5' U B 40 -108.343 158.341 135.147 1.00 42.88 O
ATOM 6 C5' U B 40 -107.627 159.590 135.043 1.00 42.88 C
ATOM 7 C4' U B 40 -106.628 159.572 133.900 1.00 42.88 C
ATOM 8 O4' U B 40 -105.618 158.556 134.112 1.00 42.88 O
ATOM 9 C3' U B 40 -107.123 159.310 132.490 1.00 42.88 C
ATOM 10 O3' U B 40 -107.667 160.514 131.961 1.00 42.88 O
ATOM 11 C2' U B 40 -105.839 158.895 131.757 1.00 42.88 C
ATOM 12 O2' U B 40 -105.100 159.991 131.242 1.00 42.88 O
ATOM 13 C1' U B 40 -105.011 158.247 132.872 1.00 42.88 C
ATOM 14 N1 U B 40 -104.806 156.792 132.778 1.00134.08 N
ATOM 15 C2 U B 40 -103.600 156.341 132.258 1.00134.06 C
ATOM 16 O2 U B 40 -102.726 157.088 131.849 1.00134.04 O
ATOM 17 N3 U B 40 -103.457 154.977 132.232 1.00134.05 N
ATOM 18 C4 U B 40 -104.375 154.037 132.654 1.00134.03 C
ATOM 19 O4 U B 40 -104.082 152.840 132.605 1.00134.05 O
ATOM 20 C5 U B 40 -105.598 154.580 133.157 1.00133.98 C
ATOM 21 C6 U B 40 -105.768 155.904 133.201 1.00134.01 C
ATOM 22 P C B 41 -108.329 160.529 130.497 1.00 73.73 P
ATOM 23 OP1 C B 41 -107.263 160.193 129.518 1.00 26.78 O
ATOM 24 OP2 C B 41 -109.029 161.828 130.373 1.00 26.86 O
ATOM 25 O5' C B 41 -109.418 159.354 130.517 1.00 27.50 O
TER
Atoms:
C2: (-115.813,155.065,135.444)
OP1: (-114.366,161.947,131.103)
OP2: (-113.460,160.315,132.889)
C4: (-113.831,155.641,136.518)
O5': (-115.385,159.690,131.463)
C3': (-117.979,158.180,133.752)
C1': (-116.564,156.290,133.428)
O4': (-116.091,157.332,132.598)
C5': (-116.334,159.701,132.530)
P: (-114.059,160.553,131.542)
O2: (-116.836,154.362,135.335)
C4': (-117.070,158.395,132.552)
C2': (-117.974,156.660,133.911)
O2': (-118.942,156.006,133.109)
N1: (-115.586,156.083,134.512)
N3: (-114.917,154.870,136.437)
N4: (-112.970,155.406,137.511)
C6: (-114.471,156.869,134.611)
C5: (-113.578,156.683,135.587)
O3': (-119.290,158.662,133.470)
OP1: (-114.366,161.947,131.103)
OP2: (-113.460,160.315,132.889)
C4: (-113.831,155.641,136.518)
O5': (-115.385,159.690,131.463)
C3': (-117.979,158.180,133.752)
C1': (-116.564,156.290,133.428)
O4': (-116.091,157.332,132.598)
C5': (-116.334,159.701,132.530)
P: (-114.059,160.553,131.542)
O2: (-116.836,154.362,135.335)
C4': (-117.070,158.395,132.552)
C2': (-117.974,156.660,133.911)
O2': (-118.942,156.006,133.109)
N1: (-115.586,156.083,134.512)
N3: (-114.917,154.870,136.437)
N4: (-112.970,155.406,137.511)
C6: (-114.471,156.869,134.611)
C5: (-113.578,156.683,135.587)
O3': (-119.290,158.662,133.470)
C4: (-104.375,154.037,132.654)
N3: (-103.457,154.977,132.232)
OP1: (-110.184,157.113,136.344)
OP2: (-107.795,157.146,137.270)
C2: (-103.600,156.341,132.258)
C1': (-105.011,158.247,132.872)
C3': (-107.123,159.310,132.490)
O5': (-108.343,158.341,135.147)
O4': (-105.618,158.556,134.112)
C5': (-107.627,159.590,135.043)
P: (-108.905,157.832,136.558)
C4': (-106.628,159.572,133.900)
C2': (-105.839,158.895,131.757)
O2': (-105.100,159.991,131.242)
N1: (-104.806,156.792,132.778)
O4: (-104.082,152.840,132.605)
O2: (-102.726,157.088,131.849)
C6: (-105.768,155.904,133.201)
C5: (-105.598,154.580,133.157)
O3': (-107.667,160.514,131.961)
N3: (-103.457,154.977,132.232)
OP1: (-110.184,157.113,136.344)
OP2: (-107.795,157.146,137.270)
C2: (-103.600,156.341,132.258)
C1': (-105.011,158.247,132.872)
C3': (-107.123,159.310,132.490)
O5': (-108.343,158.341,135.147)
O4': (-105.618,158.556,134.112)
C5': (-107.627,159.590,135.043)
P: (-108.905,157.832,136.558)
C4': (-106.628,159.572,133.900)
C2': (-105.839,158.895,131.757)
O2': (-105.100,159.991,131.242)
N1: (-104.806,156.792,132.778)
O4: (-104.082,152.840,132.605)
O2: (-102.726,157.088,131.849)
C6: (-105.768,155.904,133.201)
C5: (-105.598,154.580,133.157)
O3': (-107.667,160.514,131.961)
Image (generated by PyMOL):