Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J02:W60:W59
Extra
PDB:
ATOM 1 O3' U A 59 -116.168 4.930 64.273 1.00128.03 O
ATOM 2 P C A 60 -115.278 3.893 65.123 1.00118.01 P
ATOM 3 OP1 C A 60 -113.873 4.378 65.034 1.00120.96 O
ATOM 4 OP2 C A 60 -115.610 2.515 64.675 1.00119.97 O
ATOM 5 O5' C A 60 -115.795 4.066 66.623 1.00126.88 O
ATOM 6 C5' C A 60 -114.871 4.255 67.723 1.00131.16 C
ATOM 7 C4' C A 60 -115.416 3.613 68.980 1.00129.53 C
ATOM 8 O4' C A 60 -116.699 4.213 69.297 1.00131.42 O
ATOM 9 C3' C A 60 -115.691 2.119 68.871 1.00129.04 C
ATOM 10 O3' C A 60 -114.515 1.363 69.181 1.00128.25 O
ATOM 11 C2' C A 60 -116.815 1.899 69.881 1.00130.85 C
ATOM 12 O2' C A 60 -116.354 1.715 71.206 1.00136.07 O
ATOM 13 C1' C A 60 -117.581 3.223 69.798 1.00127.33 C
ATOM 14 N1 C A 60 -118.788 3.185 68.944 1.00 99.25 N
ATOM 15 C2 C A 60 -119.962 2.596 69.449 1.00 99.35 C
ATOM 16 O2 C A 60 -119.950 2.103 70.588 1.00102.26 O
ATOM 17 N3 C A 60 -121.076 2.579 68.680 1.00105.10 N
ATOM 18 C4 C A 60 -121.052 3.111 67.455 1.00104.13 C
ATOM 19 N4 C A 60 -122.177 3.077 66.735 1.00101.97 N
ATOM 20 C5 C A 60 -119.873 3.703 66.913 1.00105.84 C
ATOM 21 C6 C A 60 -118.775 3.719 67.683 1.00 93.85 C
ATOM 22 P C A 61 -114.189 0.009 68.368 1.00138.02 P
ATOM 23 OP1 C A 61 -112.805 -0.394 68.752 1.00136.31 O
ATOM 24 OP2 C A 61 -114.521 0.209 66.934 1.00141.52 O
ATOM 25 O5' C A 61 -115.216 -1.061 68.955 1.00 94.52 O
TER
ATOM 1 O3' U B 58 -122.140 4.190 61.179 1.00108.74 O
ATOM 2 P U B 59 -121.688 3.656 62.639 1.00129.47 P
ATOM 3 OP1 U B 59 -121.397 2.204 62.502 1.00125.49 O
ATOM 4 OP2 U B 59 -122.667 4.106 63.651 1.00127.76 O
ATOM 5 O5' U B 59 -120.319 4.403 62.952 1.00126.38 O
ATOM 6 C5' U B 59 -119.127 4.113 62.208 1.00129.39 C
ATOM 7 C4' U B 59 -117.994 4.974 62.705 1.00121.01 C
ATOM 8 O4' U B 59 -118.417 6.361 62.617 1.00125.92 O
ATOM 9 C3' U B 59 -117.577 4.736 64.154 1.00121.50 C
ATOM 10 O3' U B 59 -116.168 4.930 64.273 1.00128.03 O
ATOM 11 C2' U B 59 -118.317 5.832 64.914 1.00125.28 C
ATOM 12 O2' U B 59 -117.663 6.230 66.102 1.00125.14 O
ATOM 13 C1' U B 59 -118.341 6.967 63.889 1.00126.62 C
ATOM 14 N1 U B 59 -119.472 7.900 64.028 1.00129.86 N
ATOM 15 C2 U B 59 -119.232 9.249 63.786 1.00129.86 C
ATOM 16 O2 U B 59 -118.143 9.685 63.427 1.00129.86 O
ATOM 17 N3 U B 59 -120.319 10.069 63.974 1.00129.86 N
ATOM 18 C4 U B 59 -121.593 9.695 64.357 1.00129.86 C
ATOM 19 O4 U B 59 -122.460 10.558 64.505 1.00129.86 O
ATOM 20 C5 U B 59 -121.766 8.291 64.564 1.00129.86 C
ATOM 21 C6 U B 59 -120.731 7.463 64.397 1.00129.86 C
ATOM 22 P C B 60 -115.278 3.893 65.123 1.00118.01 P
ATOM 23 OP1 C B 60 -113.873 4.378 65.034 1.00120.96 O
ATOM 24 OP2 C B 60 -115.610 2.515 64.675 1.00119.97 O
ATOM 25 O5' C B 60 -115.795 4.066 66.623 1.00126.88 O
TER
ATOM 2 P C A 60 -115.278 3.893 65.123 1.00118.01 P
ATOM 3 OP1 C A 60 -113.873 4.378 65.034 1.00120.96 O
ATOM 4 OP2 C A 60 -115.610 2.515 64.675 1.00119.97 O
ATOM 5 O5' C A 60 -115.795 4.066 66.623 1.00126.88 O
ATOM 6 C5' C A 60 -114.871 4.255 67.723 1.00131.16 C
ATOM 7 C4' C A 60 -115.416 3.613 68.980 1.00129.53 C
ATOM 8 O4' C A 60 -116.699 4.213 69.297 1.00131.42 O
ATOM 9 C3' C A 60 -115.691 2.119 68.871 1.00129.04 C
ATOM 10 O3' C A 60 -114.515 1.363 69.181 1.00128.25 O
ATOM 11 C2' C A 60 -116.815 1.899 69.881 1.00130.85 C
ATOM 12 O2' C A 60 -116.354 1.715 71.206 1.00136.07 O
ATOM 13 C1' C A 60 -117.581 3.223 69.798 1.00127.33 C
ATOM 14 N1 C A 60 -118.788 3.185 68.944 1.00 99.25 N
ATOM 15 C2 C A 60 -119.962 2.596 69.449 1.00 99.35 C
ATOM 16 O2 C A 60 -119.950 2.103 70.588 1.00102.26 O
ATOM 17 N3 C A 60 -121.076 2.579 68.680 1.00105.10 N
ATOM 18 C4 C A 60 -121.052 3.111 67.455 1.00104.13 C
ATOM 19 N4 C A 60 -122.177 3.077 66.735 1.00101.97 N
ATOM 20 C5 C A 60 -119.873 3.703 66.913 1.00105.84 C
ATOM 21 C6 C A 60 -118.775 3.719 67.683 1.00 93.85 C
ATOM 22 P C A 61 -114.189 0.009 68.368 1.00138.02 P
ATOM 23 OP1 C A 61 -112.805 -0.394 68.752 1.00136.31 O
ATOM 24 OP2 C A 61 -114.521 0.209 66.934 1.00141.52 O
ATOM 25 O5' C A 61 -115.216 -1.061 68.955 1.00 94.52 O
TER
ATOM 1 O3' U B 58 -122.140 4.190 61.179 1.00108.74 O
ATOM 2 P U B 59 -121.688 3.656 62.639 1.00129.47 P
ATOM 3 OP1 U B 59 -121.397 2.204 62.502 1.00125.49 O
ATOM 4 OP2 U B 59 -122.667 4.106 63.651 1.00127.76 O
ATOM 5 O5' U B 59 -120.319 4.403 62.952 1.00126.38 O
ATOM 6 C5' U B 59 -119.127 4.113 62.208 1.00129.39 C
ATOM 7 C4' U B 59 -117.994 4.974 62.705 1.00121.01 C
ATOM 8 O4' U B 59 -118.417 6.361 62.617 1.00125.92 O
ATOM 9 C3' U B 59 -117.577 4.736 64.154 1.00121.50 C
ATOM 10 O3' U B 59 -116.168 4.930 64.273 1.00128.03 O
ATOM 11 C2' U B 59 -118.317 5.832 64.914 1.00125.28 C
ATOM 12 O2' U B 59 -117.663 6.230 66.102 1.00125.14 O
ATOM 13 C1' U B 59 -118.341 6.967 63.889 1.00126.62 C
ATOM 14 N1 U B 59 -119.472 7.900 64.028 1.00129.86 N
ATOM 15 C2 U B 59 -119.232 9.249 63.786 1.00129.86 C
ATOM 16 O2 U B 59 -118.143 9.685 63.427 1.00129.86 O
ATOM 17 N3 U B 59 -120.319 10.069 63.974 1.00129.86 N
ATOM 18 C4 U B 59 -121.593 9.695 64.357 1.00129.86 C
ATOM 19 O4 U B 59 -122.460 10.558 64.505 1.00129.86 O
ATOM 20 C5 U B 59 -121.766 8.291 64.564 1.00129.86 C
ATOM 21 C6 U B 59 -120.731 7.463 64.397 1.00129.86 C
ATOM 22 P C B 60 -115.278 3.893 65.123 1.00118.01 P
ATOM 23 OP1 C B 60 -113.873 4.378 65.034 1.00120.96 O
ATOM 24 OP2 C B 60 -115.610 2.515 64.675 1.00119.97 O
ATOM 25 O5' C B 60 -115.795 4.066 66.623 1.00126.88 O
TER
Atoms:
C2: (-119.962,2.596,69.449)
OP1: (-113.873,4.378,65.034)
OP2: (-115.610,2.515,64.675)
C4: (-121.052,3.111,67.455)
O5': (-115.795,4.066,66.623)
C3': (-115.691,2.119,68.871)
C1': (-117.581,3.223,69.798)
O4': (-116.699,4.213,69.297)
C5': (-114.871,4.255,67.723)
P: (-115.278,3.893,65.123)
O2: (-119.950,2.103,70.588)
C4': (-115.416,3.613,68.980)
C2': (-116.815,1.899,69.881)
O2': (-116.354,1.715,71.206)
N1: (-118.788,3.185,68.944)
N3: (-121.076,2.579,68.680)
N4: (-122.177,3.077,66.735)
C6: (-118.775,3.719,67.683)
C5: (-119.873,3.703,66.913)
O3': (-114.515,1.363,69.181)
OP1: (-113.873,4.378,65.034)
OP2: (-115.610,2.515,64.675)
C4: (-121.052,3.111,67.455)
O5': (-115.795,4.066,66.623)
C3': (-115.691,2.119,68.871)
C1': (-117.581,3.223,69.798)
O4': (-116.699,4.213,69.297)
C5': (-114.871,4.255,67.723)
P: (-115.278,3.893,65.123)
O2: (-119.950,2.103,70.588)
C4': (-115.416,3.613,68.980)
C2': (-116.815,1.899,69.881)
O2': (-116.354,1.715,71.206)
N1: (-118.788,3.185,68.944)
N3: (-121.076,2.579,68.680)
N4: (-122.177,3.077,66.735)
C6: (-118.775,3.719,67.683)
C5: (-119.873,3.703,66.913)
O3': (-114.515,1.363,69.181)
C4: (-121.593,9.695,64.357)
N3: (-120.319,10.069,63.974)
OP1: (-121.397,2.204,62.502)
OP2: (-122.667,4.106,63.651)
C2: (-119.232,9.249,63.786)
C1': (-118.341,6.967,63.889)
C3': (-117.577,4.736,64.154)
O5': (-120.319,4.403,62.952)
O4': (-118.417,6.361,62.617)
C5': (-119.127,4.113,62.208)
P: (-121.688,3.656,62.639)
C4': (-117.994,4.974,62.705)
C2': (-118.317,5.832,64.914)
O2': (-117.663,6.230,66.102)
N1: (-119.472,7.900,64.028)
O4: (-122.460,10.558,64.505)
O2: (-118.143,9.685,63.427)
C6: (-120.731,7.463,64.397)
C5: (-121.766,8.291,64.564)
O3': (-116.168,4.930,64.273)
N3: (-120.319,10.069,63.974)
OP1: (-121.397,2.204,62.502)
OP2: (-122.667,4.106,63.651)
C2: (-119.232,9.249,63.786)
C1': (-118.341,6.967,63.889)
C3': (-117.577,4.736,64.154)
O5': (-120.319,4.403,62.952)
O4': (-118.417,6.361,62.617)
C5': (-119.127,4.113,62.208)
P: (-121.688,3.656,62.639)
C4': (-117.994,4.974,62.705)
C2': (-118.317,5.832,64.914)
O2': (-117.663,6.230,66.102)
N1: (-119.472,7.900,64.028)
O4: (-122.460,10.558,64.505)
O2: (-118.143,9.685,63.427)
C6: (-120.731,7.463,64.397)
C5: (-121.766,8.291,64.564)
O3': (-116.168,4.930,64.273)
Image (generated by PyMOL):