ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:B42:B40

Extra

PDB:
ATOM 1 O3' C A 41 -167.067 -18.883 46.795 1.00 87.86 O
ATOM 2 P C A 42 -168.036 -20.013 47.421 1.00 47.11 P
ATOM 3 OP1 C A 42 -168.335 -19.617 48.824 1.00 49.05 O
ATOM 4 OP2 C A 42 -167.444 -21.356 47.131 1.00 48.95 O
ATOM 5 O5' C A 42 -169.372 -19.890 46.572 1.00 62.16 O
ATOM 6 C5' C A 42 -170.313 -20.968 46.515 1.00 62.16 C
ATOM 7 C4' C A 42 -171.021 -20.956 45.186 1.00 62.16 C
ATOM 8 O4' C A 42 -170.034 -20.983 44.128 1.00 62.16 O
ATOM 9 C3' C A 42 -171.940 -22.139 44.925 1.00 62.16 C
ATOM 10 O3' C A 42 -173.252 -21.857 45.417 1.00 62.16 O
ATOM 11 C2' C A 42 -171.930 -22.246 43.400 1.00 62.16 C
ATOM 12 O2' C A 42 -172.884 -21.411 42.765 1.00 62.16 O
ATOM 13 C1' C A 42 -170.514 -21.766 43.054 1.00 62.16 C
ATOM 14 N1 C A 42 -169.552 -22.850 42.813 1.00 50.84 N
ATOM 15 C2 C A 42 -169.782 -23.737 41.753 1.00 50.79 C
ATOM 16 O2 C A 42 -170.804 -23.595 41.052 1.00 50.77 O
ATOM 17 N3 C A 42 -168.889 -24.726 41.521 1.00 50.78 N
ATOM 18 C4 C A 42 -167.810 -24.850 42.297 1.00 50.82 C
ATOM 19 N4 C A 42 -166.953 -25.837 42.023 1.00 50.82 N
ATOM 20 C5 C A 42 -167.560 -23.967 43.386 1.00 50.82 C
ATOM 21 C6 C A 42 -168.446 -22.992 43.605 1.00 50.83 C
ATOM 22 P G A 43 -173.730 -22.449 46.835 1.00 87.67 P
ATOM 23 OP1 G A 43 -174.732 -21.496 47.350 1.00 52.78 O
ATOM 24 OP2 G A 43 -172.532 -22.756 47.655 1.00 52.77 O
ATOM 25 O5' G A 43 -174.487 -23.807 46.473 1.00 71.79 O
TER

ATOM 1 O3' U B 39 -163.217 -25.872 45.822 1.00124.39 O
ATOM 2 P U B 40 -162.893 -24.980 44.527 1.00 76.88 P
ATOM 3 OP1 U B 40 -164.162 -24.722 43.814 1.00 64.23 O
ATOM 4 OP2 U B 40 -161.790 -25.680 43.820 1.00 64.32 O
ATOM 5 O5' U B 40 -162.330 -23.598 45.098 1.00 63.35 O
ATOM 6 C5' U B 40 -161.606 -23.557 46.342 1.00 63.35 C
ATOM 7 C4' U B 40 -160.594 -22.422 46.364 1.00 63.35 C
ATOM 8 O4' U B 40 -159.574 -22.608 45.350 1.00 63.35 O
ATOM 9 C3' U B 40 -161.077 -20.996 46.145 1.00 63.35 C
ATOM 10 O3' U B 40 -161.642 -20.497 47.359 1.00 63.35 O
ATOM 11 C2' U B 40 -159.786 -20.258 45.757 1.00 63.35 C
ATOM 12 O2' U B 40 -159.043 -19.771 46.861 1.00 63.35 O
ATOM 13 C1' U B 40 -158.961 -21.359 45.080 1.00 63.35 C
ATOM 14 N1 U B 40 -158.750 -21.218 43.630 1.00131.78 N
ATOM 15 C2 U B 40 -157.538 -20.690 43.201 1.00131.76 C
ATOM 16 O2 U B 40 -156.665 -20.306 43.965 1.00131.74 O
ATOM 17 N3 U B 40 -157.389 -20.624 41.839 1.00131.75 N
ATOM 18 C4 U B 40 -158.306 -21.012 40.880 1.00131.73 C
ATOM 19 O4 U B 40 -158.012 -20.922 39.687 1.00131.75 O
ATOM 20 C5 U B 40 -159.536 -21.522 41.402 1.00131.68 C
ATOM 21 C6 U B 40 -159.712 -21.606 42.724 1.00131.71 C
ATOM 22 P C B 41 -162.287 -19.022 47.413 1.00 70.98 P
ATOM 23 OP1 C B 41 -161.210 -18.040 47.120 1.00 24.03 O
ATOM 24 OP2 C B 41 -163.005 -18.914 48.695 1.00 24.11 O
ATOM 25 O5' C B 41 -163.377 -19.007 46.242 1.00 87.86 O
TER

Atoms:
C2: (-169.782,-23.737,41.753)
OP1: (-168.335,-19.617,48.824)
OP2: (-167.444,-21.356,47.131)
C4: (-167.810,-24.850,42.297)
O5': (-169.372,-19.890,46.572)
C3': (-171.940,-22.139,44.925)
C1': (-170.514,-21.766,43.054)
O4': (-170.034,-20.983,44.128)
C5': (-170.313,-20.968,46.515)
P: (-168.036,-20.013,47.421)
O2: (-170.804,-23.595,41.052)
C4': (-171.021,-20.956,45.186)
C2': (-171.930,-22.246,43.400)
O2': (-172.884,-21.411,42.765)
N1: (-169.552,-22.850,42.813)
N3: (-168.889,-24.726,41.521)
N4: (-166.953,-25.837,42.023)
C6: (-168.446,-22.992,43.605)
C5: (-167.560,-23.967,43.386)
O3': (-173.252,-21.857,45.417)
C4: (-158.306,-21.012,40.880)
N3: (-157.389,-20.624,41.839)
OP1: (-164.162,-24.722,43.814)
OP2: (-161.790,-25.680,43.820)
C2: (-157.538,-20.690,43.201)
C1': (-158.961,-21.359,45.080)
C3': (-161.077,-20.996,46.145)
O5': (-162.330,-23.598,45.098)
O4': (-159.574,-22.608,45.350)
C5': (-161.606,-23.557,46.342)
P: (-162.893,-24.980,44.527)
C4': (-160.594,-22.422,46.364)
C2': (-159.786,-20.258,45.757)
O2': (-159.043,-19.771,46.861)
N1: (-158.750,-21.218,43.630)
O4: (-158.012,-20.922,39.687)
O2: (-156.665,-20.306,43.965)
C6: (-159.712,-21.606,42.724)
C5: (-159.536,-21.522,41.402)
O3': (-161.642,-20.497,47.359)
Image (generated by PyMOL):
PyMOL image
show in jmol