ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUA:A163:A162

Extra

PDB:
ATOM 1 O3' U A 162 101.692 43.942 0.699 1.00 54.05 O
ATOM 2 P C A 163 101.778 43.351 -0.791 1.00 54.63 P
ATOM 3 OP1 C A 163 102.228 44.480 -1.639 1.00 56.04 O
ATOM 4 OP2 C A 163 100.527 42.658 -1.141 1.00 54.44 O
ATOM 5 O5' C A 163 102.943 42.285 -0.708 1.00 55.30 O
ATOM 6 C5' C A 163 104.329 42.678 -0.671 1.00 56.11 C
ATOM 7 C4' C A 163 105.160 41.671 -1.427 1.00 57.18 C
ATOM 8 O4' C A 163 105.122 40.400 -0.730 1.00 58.45 O
ATOM 9 C3' C A 163 104.623 41.369 -2.811 1.00 57.40 C
ATOM 10 O3' C A 163 105.110 42.281 -3.747 1.00 58.28 O
ATOM 11 C2' C A 163 105.088 39.942 -3.058 1.00 58.31 C
ATOM 12 O2' C A 163 106.429 39.865 -3.496 1.00 58.54 O
ATOM 13 C1' C A 163 104.975 39.339 -1.658 1.00 58.44 C
ATOM 14 N1 C A 163 103.666 38.701 -1.405 1.00 59.63 N
ATOM 15 C2 C A 163 103.389 37.449 -1.966 1.00 60.63 C
ATOM 16 O2 C A 163 104.239 36.906 -2.682 1.00 62.05 O
ATOM 17 N3 C A 163 102.194 36.865 -1.713 1.00 60.79 N
ATOM 18 C4 C A 163 101.297 37.486 -0.943 1.00 60.81 C
ATOM 19 N4 C A 163 100.144 36.874 -0.705 1.00 61.78 N
ATOM 20 C5 C A 163 101.545 38.761 -0.377 1.00 60.75 C
ATOM 21 C6 C A 163 102.730 39.326 -0.627 1.00 60.36 C
ATOM 22 P C A 164 104.166 42.750 -4.954 1.00 60.06 P
ATOM 23 OP1 C A 164 104.920 43.809 -5.679 1.00 60.42 O
ATOM 24 OP2 C A 164 102.822 43.066 -4.420 1.00 59.78 O
ATOM 25 O5' C A 164 104.077 41.457 -5.889 1.00 59.07 O
TER

ATOM 1 O3' A B 161 98.304 39.487 3.171 1.00 54.13 O
ATOM 2 P U B 162 97.810 39.969 1.715 1.00 54.91 P
ATOM 3 OP1 U B 162 96.395 40.400 1.815 1.00 53.83 O
ATOM 4 OP2 U B 162 98.192 38.926 0.715 1.00 54.21 O
ATOM 5 O5' U B 162 98.719 41.234 1.415 1.00 55.30 O
ATOM 6 C5' U B 162 98.641 42.415 2.239 1.00 54.73 C
ATOM 7 C4' U B 162 99.554 43.505 1.709 1.00 54.32 C
ATOM 8 O4' U B 162 99.369 44.691 2.519 1.00 53.80 O
ATOM 9 C3' U B 162 101.049 43.197 1.751 1.00 54.03 C
ATOM 10 O3' U B 162 101.692 43.942 0.699 1.00 54.05 O
ATOM 11 C2' U B 162 101.468 43.815 3.084 1.00 53.71 C
ATOM 12 O2' U B 162 102.834 44.154 3.181 1.00 54.40 O
ATOM 13 C1' U B 162 100.598 45.063 3.094 1.00 53.44 C
ATOM 14 N1 U B 162 100.330 45.666 4.400 1.00 54.03 N
ATOM 15 C2 U B 162 101.038 46.792 4.723 1.00 55.29 C
ATOM 16 O2 U B 162 101.912 47.249 4.008 1.00 57.67 O
ATOM 17 N3 U B 162 100.688 47.370 5.913 1.00 55.46 N
ATOM 18 C4 U B 162 99.731 46.933 6.792 1.00 55.45 C
ATOM 19 O4 U B 162 99.476 47.601 7.789 1.00 56.23 O
ATOM 20 C5 U B 162 99.071 45.736 6.401 1.00 55.72 C
ATOM 21 C6 U B 162 99.391 45.154 5.248 1.00 55.05 C
ATOM 22 P C B 163 101.778 43.351 -0.791 1.00 54.63 P
ATOM 23 OP1 C B 163 102.228 44.480 -1.639 1.00 56.04 O
ATOM 24 OP2 C B 163 100.527 42.658 -1.141 1.00 54.44 O
ATOM 25 O5' C B 163 102.943 42.285 -0.708 1.00 55.30 O
TER

Atoms:
C2: (103.389,37.449,-1.966)
OP1: (102.228,44.480,-1.639)
OP2: (100.527,42.658,-1.141)
C4: (101.297,37.486,-0.943)
O5': (102.943,42.285,-0.708)
C3': (104.623,41.369,-2.811)
C1': (104.975,39.339,-1.658)
O4': (105.122,40.400,-0.730)
C5': (104.329,42.678,-0.671)
P: (101.778,43.351,-0.791)
O2: (104.239,36.906,-2.682)
C4': (105.160,41.671,-1.427)
C2': (105.088,39.942,-3.058)
O2': (106.429,39.865,-3.496)
N1: (103.666,38.701,-1.405)
N3: (102.194,36.865,-1.713)
N4: (100.144,36.874,-0.705)
C6: (102.730,39.326,-0.627)
C5: (101.545,38.761,-0.377)
O3': (105.110,42.281,-3.747)
C4: (99.731,46.933,6.792)
N3: (100.688,47.370,5.913)
OP1: (96.395,40.400,1.815)
OP2: (98.192,38.926,0.715)
C2: (101.038,46.792,4.723)
C1': (100.598,45.063,3.094)
C3': (101.049,43.197,1.751)
O5': (98.719,41.234,1.415)
O4': (99.369,44.691,2.519)
C5': (98.641,42.415,2.239)
P: (97.810,39.969,1.715)
C4': (99.554,43.505,1.709)
C2': (101.468,43.815,3.084)
O2': (102.834,44.154,3.181)
N1: (100.330,45.666,4.400)
O4: (99.476,47.601,7.789)
O2: (101.912,47.249,4.008)
C6: (99.391,45.154,5.248)
C5: (99.071,45.736,6.401)
O3': (101.692,43.942,0.699)
Image (generated by PyMOL):
PyMOL image
show in jmol