Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1279:A1277
Extra
PDB:
ATOM 1 O3' U A1278 258.317 124.609 -6.901 1.00 53.00 O
ATOM 2 P C A1279 256.939 123.835 -6.597 1.00 51.02 P
ATOM 3 OP1 C A1279 256.098 124.810 -5.840 1.00 52.31 O
ATOM 4 OP2 C A1279 257.246 122.513 -5.997 1.00 49.78 O
ATOM 5 O5' C A1279 256.266 123.663 -8.026 1.00 50.56 O
ATOM 6 C5' C A1279 255.880 124.819 -8.806 1.00 48.24 C
ATOM 7 C4' C A1279 254.600 124.543 -9.570 1.00 47.58 C
ATOM 8 O4' C A1279 254.819 123.478 -10.538 1.00 45.57 O
ATOM 9 C3' C A1279 253.407 124.073 -8.744 1.00 47.09 C
ATOM 10 O3' C A1279 252.675 125.156 -8.171 1.00 47.37 O
ATOM 11 C2' C A1279 252.570 123.325 -9.774 1.00 46.46 C
ATOM 12 O2' C A1279 251.790 124.204 -10.564 1.00 46.00 O
ATOM 13 C1' C A1279 253.650 122.683 -10.646 1.00 45.09 C
ATOM 14 N1 C A1279 253.984 121.306 -10.232 1.00 44.09 N
ATOM 15 C2 C A1279 253.013 120.296 -10.356 1.00 44.83 C
ATOM 16 O2 C A1279 251.875 120.598 -10.749 1.00 47.66 O
ATOM 17 N3 C A1279 253.341 119.021 -10.036 1.00 42.34 N
ATOM 18 C4 C A1279 254.568 118.742 -9.598 1.00 39.82 C
ATOM 19 N4 C A1279 254.865 117.475 -9.329 1.00 38.05 N
ATOM 20 C5 C A1279 255.551 119.751 -9.425 1.00 41.09 C
ATOM 21 C6 C A1279 255.223 121.005 -9.751 1.00 42.48 C
ATOM 22 P G A1280 252.048 125.008 -6.691 1.00 46.86 P
ATOM 23 OP1 G A1280 250.912 125.982 -6.614 1.00 45.11 O
ATOM 24 OP2 G A1280 253.155 125.057 -5.702 1.00 47.89 O
ATOM 25 O5' G A1280 251.446 123.548 -6.665 1.00 47.20 O
TER
ATOM 1 O3' G B1276 258.544 115.035 -11.844 1.00 58.21 O
ATOM 2 P U B1277 258.702 115.853 -10.435 1.00 56.50 P
ATOM 3 OP1 U B1277 259.931 115.277 -9.804 1.00 56.23 O
ATOM 4 OP2 U B1277 257.442 115.885 -9.641 1.00 57.79 O
ATOM 5 O5' U B1277 259.080 117.338 -10.889 1.00 53.24 O
ATOM 6 C5' U B1277 260.277 117.562 -11.649 1.00 52.62 C
ATOM 7 C4' U B1277 260.460 119.025 -11.960 1.00 51.98 C
ATOM 8 O4' U B1277 259.430 119.470 -12.874 1.00 51.96 O
ATOM 9 C3' U B1277 260.457 119.997 -10.792 1.00 52.46 C
ATOM 10 O3' U B1277 261.707 120.272 -10.069 1.00 52.53 O
ATOM 11 C2' U B1277 259.197 120.858 -10.942 1.00 52.18 C
ATOM 12 O2' U B1277 259.362 122.243 -10.712 1.00 52.64 O
ATOM 13 C1' U B1277 258.895 120.707 -12.435 1.00 52.31 C
ATOM 14 N1 U B1277 257.456 120.722 -12.743 1.00 51.31 N
ATOM 15 C2 U B1277 256.918 121.883 -13.239 1.00 51.13 C
ATOM 16 O2 U B1277 257.574 122.895 -13.402 1.00 50.15 O
ATOM 17 N3 U B1277 255.576 121.821 -13.532 1.00 52.60 N
ATOM 18 C4 U B1277 254.735 120.733 -13.368 1.00 52.31 C
ATOM 19 O4 U B1277 253.555 120.812 -13.719 1.00 52.83 O
ATOM 20 C5 U B1277 255.367 119.577 -12.832 1.00 50.78 C
ATOM 21 C6 U B1277 256.670 119.610 -12.548 1.00 51.50 C
ATOM 22 P U B1278 262.445 121.708 -10.171 1.00 51.15 P
ATOM 23 OP1 U B1278 262.415 122.210 -11.578 1.00 51.59 O
ATOM 24 OP2 U B1278 263.729 121.454 -9.531 1.00 51.86 O
ATOM 25 O5' U B1278 261.582 122.724 -9.246 1.00 52.59 O
TER
ATOM 2 P C A1279 256.939 123.835 -6.597 1.00 51.02 P
ATOM 3 OP1 C A1279 256.098 124.810 -5.840 1.00 52.31 O
ATOM 4 OP2 C A1279 257.246 122.513 -5.997 1.00 49.78 O
ATOM 5 O5' C A1279 256.266 123.663 -8.026 1.00 50.56 O
ATOM 6 C5' C A1279 255.880 124.819 -8.806 1.00 48.24 C
ATOM 7 C4' C A1279 254.600 124.543 -9.570 1.00 47.58 C
ATOM 8 O4' C A1279 254.819 123.478 -10.538 1.00 45.57 O
ATOM 9 C3' C A1279 253.407 124.073 -8.744 1.00 47.09 C
ATOM 10 O3' C A1279 252.675 125.156 -8.171 1.00 47.37 O
ATOM 11 C2' C A1279 252.570 123.325 -9.774 1.00 46.46 C
ATOM 12 O2' C A1279 251.790 124.204 -10.564 1.00 46.00 O
ATOM 13 C1' C A1279 253.650 122.683 -10.646 1.00 45.09 C
ATOM 14 N1 C A1279 253.984 121.306 -10.232 1.00 44.09 N
ATOM 15 C2 C A1279 253.013 120.296 -10.356 1.00 44.83 C
ATOM 16 O2 C A1279 251.875 120.598 -10.749 1.00 47.66 O
ATOM 17 N3 C A1279 253.341 119.021 -10.036 1.00 42.34 N
ATOM 18 C4 C A1279 254.568 118.742 -9.598 1.00 39.82 C
ATOM 19 N4 C A1279 254.865 117.475 -9.329 1.00 38.05 N
ATOM 20 C5 C A1279 255.551 119.751 -9.425 1.00 41.09 C
ATOM 21 C6 C A1279 255.223 121.005 -9.751 1.00 42.48 C
ATOM 22 P G A1280 252.048 125.008 -6.691 1.00 46.86 P
ATOM 23 OP1 G A1280 250.912 125.982 -6.614 1.00 45.11 O
ATOM 24 OP2 G A1280 253.155 125.057 -5.702 1.00 47.89 O
ATOM 25 O5' G A1280 251.446 123.548 -6.665 1.00 47.20 O
TER
ATOM 1 O3' G B1276 258.544 115.035 -11.844 1.00 58.21 O
ATOM 2 P U B1277 258.702 115.853 -10.435 1.00 56.50 P
ATOM 3 OP1 U B1277 259.931 115.277 -9.804 1.00 56.23 O
ATOM 4 OP2 U B1277 257.442 115.885 -9.641 1.00 57.79 O
ATOM 5 O5' U B1277 259.080 117.338 -10.889 1.00 53.24 O
ATOM 6 C5' U B1277 260.277 117.562 -11.649 1.00 52.62 C
ATOM 7 C4' U B1277 260.460 119.025 -11.960 1.00 51.98 C
ATOM 8 O4' U B1277 259.430 119.470 -12.874 1.00 51.96 O
ATOM 9 C3' U B1277 260.457 119.997 -10.792 1.00 52.46 C
ATOM 10 O3' U B1277 261.707 120.272 -10.069 1.00 52.53 O
ATOM 11 C2' U B1277 259.197 120.858 -10.942 1.00 52.18 C
ATOM 12 O2' U B1277 259.362 122.243 -10.712 1.00 52.64 O
ATOM 13 C1' U B1277 258.895 120.707 -12.435 1.00 52.31 C
ATOM 14 N1 U B1277 257.456 120.722 -12.743 1.00 51.31 N
ATOM 15 C2 U B1277 256.918 121.883 -13.239 1.00 51.13 C
ATOM 16 O2 U B1277 257.574 122.895 -13.402 1.00 50.15 O
ATOM 17 N3 U B1277 255.576 121.821 -13.532 1.00 52.60 N
ATOM 18 C4 U B1277 254.735 120.733 -13.368 1.00 52.31 C
ATOM 19 O4 U B1277 253.555 120.812 -13.719 1.00 52.83 O
ATOM 20 C5 U B1277 255.367 119.577 -12.832 1.00 50.78 C
ATOM 21 C6 U B1277 256.670 119.610 -12.548 1.00 51.50 C
ATOM 22 P U B1278 262.445 121.708 -10.171 1.00 51.15 P
ATOM 23 OP1 U B1278 262.415 122.210 -11.578 1.00 51.59 O
ATOM 24 OP2 U B1278 263.729 121.454 -9.531 1.00 51.86 O
ATOM 25 O5' U B1278 261.582 122.724 -9.246 1.00 52.59 O
TER
Atoms:
C2: (253.013,120.296,-10.356)
OP1: (256.098,124.810,-5.840)
OP2: (257.246,122.513,-5.997)
C4: (254.568,118.742,-9.598)
O5': (256.266,123.663,-8.026)
C3': (253.407,124.073,-8.744)
C1': (253.650,122.683,-10.646)
O4': (254.819,123.478,-10.538)
C5': (255.880,124.819,-8.806)
P: (256.939,123.835,-6.597)
O2: (251.875,120.598,-10.749)
C4': (254.600,124.543,-9.570)
C2': (252.570,123.325,-9.774)
O2': (251.790,124.204,-10.564)
N1: (253.984,121.306,-10.232)
N3: (253.341,119.021,-10.036)
N4: (254.865,117.475,-9.329)
C6: (255.223,121.005,-9.751)
C5: (255.551,119.751,-9.425)
O3': (252.675,125.156,-8.171)
OP1: (256.098,124.810,-5.840)
OP2: (257.246,122.513,-5.997)
C4: (254.568,118.742,-9.598)
O5': (256.266,123.663,-8.026)
C3': (253.407,124.073,-8.744)
C1': (253.650,122.683,-10.646)
O4': (254.819,123.478,-10.538)
C5': (255.880,124.819,-8.806)
P: (256.939,123.835,-6.597)
O2: (251.875,120.598,-10.749)
C4': (254.600,124.543,-9.570)
C2': (252.570,123.325,-9.774)
O2': (251.790,124.204,-10.564)
N1: (253.984,121.306,-10.232)
N3: (253.341,119.021,-10.036)
N4: (254.865,117.475,-9.329)
C6: (255.223,121.005,-9.751)
C5: (255.551,119.751,-9.425)
O3': (252.675,125.156,-8.171)
C4: (254.735,120.733,-13.368)
N3: (255.576,121.821,-13.532)
OP1: (259.931,115.277,-9.804)
OP2: (257.442,115.885,-9.641)
C2: (256.918,121.883,-13.239)
C1': (258.895,120.707,-12.435)
C3': (260.457,119.997,-10.792)
O5': (259.080,117.338,-10.889)
O4': (259.430,119.470,-12.874)
C5': (260.277,117.562,-11.649)
P: (258.702,115.853,-10.435)
C4': (260.460,119.025,-11.960)
C2': (259.197,120.858,-10.942)
O2': (259.362,122.243,-10.712)
N1: (257.456,120.722,-12.743)
O4: (253.555,120.812,-13.719)
O2: (257.574,122.895,-13.402)
C6: (256.670,119.610,-12.548)
C5: (255.367,119.577,-12.832)
O3': (261.707,120.272,-10.069)
N3: (255.576,121.821,-13.532)
OP1: (259.931,115.277,-9.804)
OP2: (257.442,115.885,-9.641)
C2: (256.918,121.883,-13.239)
C1': (258.895,120.707,-12.435)
C3': (260.457,119.997,-10.792)
O5': (259.080,117.338,-10.889)
O4': (259.430,119.470,-12.874)
C5': (260.277,117.562,-11.649)
P: (258.702,115.853,-10.435)
C4': (260.460,119.025,-11.960)
C2': (259.197,120.858,-10.942)
O2': (259.362,122.243,-10.712)
N1: (257.456,120.722,-12.743)
O4: (253.555,120.812,-13.719)
O2: (257.574,122.895,-13.402)
C6: (256.670,119.610,-12.548)
C5: (255.367,119.577,-12.832)
O3': (261.707,120.272,-10.069)
Image (generated by PyMOL):