Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A163:A162
Extra
PDB:
ATOM 1 O3' U A 162 101.969 44.070 1.082 1.00 41.34 O
ATOM 2 P C A 163 101.986 43.487 -0.414 1.00 42.09 P
ATOM 3 OP1 C A 163 102.444 44.595 -1.311 1.00 45.02 O
ATOM 4 OP2 C A 163 100.692 42.839 -0.698 1.00 42.16 O
ATOM 5 O5' C A 163 103.127 42.387 -0.387 1.00 43.31 O
ATOM 6 C5' C A 163 104.523 42.752 -0.330 1.00 45.20 C
ATOM 7 C4' C A 163 105.356 41.720 -1.060 1.00 46.24 C
ATOM 8 O4' C A 163 105.312 40.461 -0.341 1.00 47.18 O
ATOM 9 C3' C A 163 104.845 41.396 -2.450 1.00 46.10 C
ATOM 10 O3' C A 163 105.366 42.289 -3.395 1.00 46.24 O
ATOM 11 C2' C A 163 105.313 39.966 -2.664 1.00 46.82 C
ATOM 12 O2' C A 163 106.660 39.885 -3.065 1.00 48.40 O
ATOM 13 C1' C A 163 105.182 39.387 -1.256 1.00 46.96 C
ATOM 14 N1 C A 163 103.870 38.752 -1.030 1.00 47.00 N
ATOM 15 C2 C A 163 103.543 37.588 -1.733 1.00 46.86 C
ATOM 16 O2 C A 163 104.367 37.112 -2.522 1.00 47.71 O
ATOM 17 N3 C A 163 102.337 37.015 -1.534 1.00 47.29 N
ATOM 18 C4 C A 163 101.474 37.561 -0.674 1.00 48.07 C
ATOM 19 N4 C A 163 100.297 36.969 -0.505 1.00 49.01 N
ATOM 20 C5 C A 163 101.780 38.741 0.055 1.00 48.25 C
ATOM 21 C6 C A 163 102.977 39.296 -0.149 1.00 47.78 C
ATOM 22 P C A 164 104.403 42.897 -4.526 1.00 46.68 P
ATOM 23 OP1 C A 164 105.173 43.999 -5.185 1.00 49.47 O
ATOM 24 OP2 C A 164 103.083 43.222 -3.921 1.00 46.45 O
ATOM 25 O5' C A 164 104.272 41.692 -5.572 1.00 45.66 O
TER
ATOM 1 O3' A B 161 98.517 39.677 3.452 1.00 40.06 O
ATOM 2 P U B 162 98.074 40.187 1.989 1.00 41.57 P
ATOM 3 OP1 U B 162 98.511 39.177 0.968 1.00 41.54 O
ATOM 4 OP2 U B 162 96.643 40.598 2.047 1.00 40.76 O
ATOM 5 O5' U B 162 98.984 41.464 1.736 1.00 42.53 O
ATOM 6 C5' U B 162 98.830 42.672 2.513 1.00 42.67 C
ATOM 7 C4' U B 162 99.784 43.744 2.016 1.00 41.94 C
ATOM 8 O4' U B 162 99.602 44.949 2.802 1.00 42.17 O
ATOM 9 C3' U B 162 101.263 43.390 2.121 1.00 41.23 C
ATOM 10 O3' U B 162 101.969 44.070 1.082 1.00 41.34 O
ATOM 11 C2' U B 162 101.659 44.034 3.442 1.00 41.39 C
ATOM 12 O2' U B 162 103.037 44.315 3.532 1.00 42.30 O
ATOM 13 C1' U B 162 100.827 45.313 3.393 1.00 42.38 C
ATOM 14 N1 U B 162 100.550 45.967 4.677 1.00 44.60 N
ATOM 15 C2 U B 162 101.433 46.944 5.101 1.00 46.39 C
ATOM 16 O2 U B 162 102.446 47.244 4.484 1.00 47.86 O
ATOM 17 N3 U B 162 101.092 47.556 6.279 1.00 47.09 N
ATOM 18 C4 U B 162 99.995 47.288 7.064 1.00 47.23 C
ATOM 19 O4 U B 162 99.837 47.915 8.109 1.00 49.60 O
ATOM 20 C5 U B 162 99.144 46.252 6.573 1.00 46.15 C
ATOM 21 C6 U B 162 99.444 45.640 5.428 1.00 45.46 C
ATOM 22 P C B 163 101.986 43.487 -0.414 1.00 42.09 P
ATOM 23 OP1 C B 163 102.444 44.595 -1.311 1.00 45.02 O
ATOM 24 OP2 C B 163 100.692 42.839 -0.698 1.00 42.16 O
ATOM 25 O5' C B 163 103.127 42.387 -0.387 1.00 43.31 O
TER
ATOM 2 P C A 163 101.986 43.487 -0.414 1.00 42.09 P
ATOM 3 OP1 C A 163 102.444 44.595 -1.311 1.00 45.02 O
ATOM 4 OP2 C A 163 100.692 42.839 -0.698 1.00 42.16 O
ATOM 5 O5' C A 163 103.127 42.387 -0.387 1.00 43.31 O
ATOM 6 C5' C A 163 104.523 42.752 -0.330 1.00 45.20 C
ATOM 7 C4' C A 163 105.356 41.720 -1.060 1.00 46.24 C
ATOM 8 O4' C A 163 105.312 40.461 -0.341 1.00 47.18 O
ATOM 9 C3' C A 163 104.845 41.396 -2.450 1.00 46.10 C
ATOM 10 O3' C A 163 105.366 42.289 -3.395 1.00 46.24 O
ATOM 11 C2' C A 163 105.313 39.966 -2.664 1.00 46.82 C
ATOM 12 O2' C A 163 106.660 39.885 -3.065 1.00 48.40 O
ATOM 13 C1' C A 163 105.182 39.387 -1.256 1.00 46.96 C
ATOM 14 N1 C A 163 103.870 38.752 -1.030 1.00 47.00 N
ATOM 15 C2 C A 163 103.543 37.588 -1.733 1.00 46.86 C
ATOM 16 O2 C A 163 104.367 37.112 -2.522 1.00 47.71 O
ATOM 17 N3 C A 163 102.337 37.015 -1.534 1.00 47.29 N
ATOM 18 C4 C A 163 101.474 37.561 -0.674 1.00 48.07 C
ATOM 19 N4 C A 163 100.297 36.969 -0.505 1.00 49.01 N
ATOM 20 C5 C A 163 101.780 38.741 0.055 1.00 48.25 C
ATOM 21 C6 C A 163 102.977 39.296 -0.149 1.00 47.78 C
ATOM 22 P C A 164 104.403 42.897 -4.526 1.00 46.68 P
ATOM 23 OP1 C A 164 105.173 43.999 -5.185 1.00 49.47 O
ATOM 24 OP2 C A 164 103.083 43.222 -3.921 1.00 46.45 O
ATOM 25 O5' C A 164 104.272 41.692 -5.572 1.00 45.66 O
TER
ATOM 1 O3' A B 161 98.517 39.677 3.452 1.00 40.06 O
ATOM 2 P U B 162 98.074 40.187 1.989 1.00 41.57 P
ATOM 3 OP1 U B 162 98.511 39.177 0.968 1.00 41.54 O
ATOM 4 OP2 U B 162 96.643 40.598 2.047 1.00 40.76 O
ATOM 5 O5' U B 162 98.984 41.464 1.736 1.00 42.53 O
ATOM 6 C5' U B 162 98.830 42.672 2.513 1.00 42.67 C
ATOM 7 C4' U B 162 99.784 43.744 2.016 1.00 41.94 C
ATOM 8 O4' U B 162 99.602 44.949 2.802 1.00 42.17 O
ATOM 9 C3' U B 162 101.263 43.390 2.121 1.00 41.23 C
ATOM 10 O3' U B 162 101.969 44.070 1.082 1.00 41.34 O
ATOM 11 C2' U B 162 101.659 44.034 3.442 1.00 41.39 C
ATOM 12 O2' U B 162 103.037 44.315 3.532 1.00 42.30 O
ATOM 13 C1' U B 162 100.827 45.313 3.393 1.00 42.38 C
ATOM 14 N1 U B 162 100.550 45.967 4.677 1.00 44.60 N
ATOM 15 C2 U B 162 101.433 46.944 5.101 1.00 46.39 C
ATOM 16 O2 U B 162 102.446 47.244 4.484 1.00 47.86 O
ATOM 17 N3 U B 162 101.092 47.556 6.279 1.00 47.09 N
ATOM 18 C4 U B 162 99.995 47.288 7.064 1.00 47.23 C
ATOM 19 O4 U B 162 99.837 47.915 8.109 1.00 49.60 O
ATOM 20 C5 U B 162 99.144 46.252 6.573 1.00 46.15 C
ATOM 21 C6 U B 162 99.444 45.640 5.428 1.00 45.46 C
ATOM 22 P C B 163 101.986 43.487 -0.414 1.00 42.09 P
ATOM 23 OP1 C B 163 102.444 44.595 -1.311 1.00 45.02 O
ATOM 24 OP2 C B 163 100.692 42.839 -0.698 1.00 42.16 O
ATOM 25 O5' C B 163 103.127 42.387 -0.387 1.00 43.31 O
TER
Atoms:
C2: (103.543,37.588,-1.733)
OP1: (102.444,44.595,-1.311)
OP2: (100.692,42.839,-0.698)
C4: (101.474,37.561,-0.674)
O5': (103.127,42.387,-0.387)
C3': (104.845,41.396,-2.450)
C1': (105.182,39.387,-1.256)
O4': (105.312,40.461,-0.341)
C5': (104.523,42.752,-0.330)
P: (101.986,43.487,-0.414)
O2: (104.367,37.112,-2.522)
C4': (105.356,41.720,-1.060)
C2': (105.313,39.966,-2.664)
O2': (106.660,39.885,-3.065)
N1: (103.870,38.752,-1.030)
N3: (102.337,37.015,-1.534)
N4: (100.297,36.969,-0.505)
C6: (102.977,39.296,-0.149)
C5: (101.780,38.741,0.055)
O3': (105.366,42.289,-3.395)
OP1: (102.444,44.595,-1.311)
OP2: (100.692,42.839,-0.698)
C4: (101.474,37.561,-0.674)
O5': (103.127,42.387,-0.387)
C3': (104.845,41.396,-2.450)
C1': (105.182,39.387,-1.256)
O4': (105.312,40.461,-0.341)
C5': (104.523,42.752,-0.330)
P: (101.986,43.487,-0.414)
O2: (104.367,37.112,-2.522)
C4': (105.356,41.720,-1.060)
C2': (105.313,39.966,-2.664)
O2': (106.660,39.885,-3.065)
N1: (103.870,38.752,-1.030)
N3: (102.337,37.015,-1.534)
N4: (100.297,36.969,-0.505)
C6: (102.977,39.296,-0.149)
C5: (101.780,38.741,0.055)
O3': (105.366,42.289,-3.395)
C4: (99.995,47.288,7.064)
N3: (101.092,47.556,6.279)
OP1: (98.511,39.177,0.968)
OP2: (96.643,40.598,2.047)
C2: (101.433,46.944,5.101)
C1': (100.827,45.313,3.393)
C3': (101.263,43.390,2.121)
O5': (98.984,41.464,1.736)
O4': (99.602,44.949,2.802)
C5': (98.830,42.672,2.513)
P: (98.074,40.187,1.989)
C4': (99.784,43.744,2.016)
C2': (101.659,44.034,3.442)
O2': (103.037,44.315,3.532)
N1: (100.550,45.967,4.677)
O4: (99.837,47.915,8.109)
O2: (102.446,47.244,4.484)
C6: (99.444,45.640,5.428)
C5: (99.144,46.252,6.573)
O3': (101.969,44.070,1.082)
N3: (101.092,47.556,6.279)
OP1: (98.511,39.177,0.968)
OP2: (96.643,40.598,2.047)
C2: (101.433,46.944,5.101)
C1': (100.827,45.313,3.393)
C3': (101.263,43.390,2.121)
O5': (98.984,41.464,1.736)
O4': (99.602,44.949,2.802)
C5': (98.830,42.672,2.513)
P: (98.074,40.187,1.989)
C4': (99.784,43.744,2.016)
C2': (101.659,44.034,3.442)
O2': (103.037,44.315,3.532)
N1: (100.550,45.967,4.677)
O4: (99.837,47.915,8.109)
O2: (102.446,47.244,4.484)
C6: (99.444,45.640,5.428)
C5: (99.144,46.252,6.573)
O3': (101.969,44.070,1.082)
Image (generated by PyMOL):