ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A944:A924

Extra

PDB:
ATOM 1 O3' G A 943 226.152 121.702 5.748 1.00 48.25 O
ATOM 2 P C A 944 224.916 122.669 5.443 1.00 47.74 P
ATOM 3 OP1 C A 944 225.060 123.184 4.051 1.00 48.85 O
ATOM 4 OP2 C A 944 224.757 123.623 6.557 1.00 49.09 O
ATOM 5 O5' C A 944 223.704 121.666 5.437 1.00 48.92 O
ATOM 6 C5' C A 944 223.525 120.711 6.493 1.00 46.85 C
ATOM 7 C4' C A 944 222.055 120.518 6.736 1.00 46.58 C
ATOM 8 O4' C A 944 221.569 119.362 6.002 1.00 44.98 O
ATOM 9 C3' C A 944 221.675 120.231 8.171 1.00 47.05 C
ATOM 10 O3' C A 944 221.640 121.427 8.912 1.00 48.24 O
ATOM 11 C2' C A 944 220.325 119.550 8.006 1.00 45.54 C
ATOM 12 O2' C A 944 219.296 120.480 7.714 1.00 45.31 O
ATOM 13 C1' C A 944 220.586 118.687 6.770 1.00 43.20 C
ATOM 14 N1 C A 944 221.139 117.381 7.169 1.00 39.39 N
ATOM 15 C2 C A 944 220.324 116.491 7.863 1.00 39.30 C
ATOM 16 O2 C A 944 219.143 116.797 8.062 1.00 42.07 O
ATOM 17 N3 C A 944 220.836 115.315 8.292 1.00 38.18 N
ATOM 18 C4 C A 944 222.105 115.003 8.020 1.00 38.70 C
ATOM 19 N4 C A 944 222.574 113.827 8.455 1.00 36.78 N
ATOM 20 C5 C A 944 222.952 115.883 7.287 1.00 39.14 C
ATOM 21 C6 C A 944 222.433 117.051 6.888 1.00 39.31 C
ATOM 22 P G A 945 222.398 121.500 10.328 1.00 48.59 P
ATOM 23 OP1 G A 945 222.733 122.952 10.484 1.00 48.94 O
ATOM 24 OP2 G A 945 223.475 120.486 10.439 1.00 47.70 O
ATOM 25 O5' G A 945 221.271 121.059 11.339 1.00 49.55 O
TER

ATOM 1 O3' G B 923 225.750 112.842 8.111 1.00 49.50 O
ATOM 2 P U B 924 225.632 111.273 8.475 1.00 50.73 P
ATOM 3 OP1 U B 924 224.533 111.152 9.490 1.00 52.43 O
ATOM 4 OP2 U B 924 226.975 110.731 8.810 1.00 48.66 O
ATOM 5 O5' U B 924 225.128 110.607 7.112 1.00 50.29 O
ATOM 6 C5' U B 924 223.890 111.022 6.504 1.00 49.67 C
ATOM 7 C4' U B 924 223.666 110.319 5.175 1.00 49.16 C
ATOM 8 O4' U B 924 224.654 110.743 4.192 1.00 50.45 O
ATOM 9 C3' U B 924 223.736 108.802 5.138 1.00 48.17 C
ATOM 10 O3' U B 924 222.556 108.190 5.594 1.00 47.76 O
ATOM 11 C2' U B 924 223.960 108.530 3.657 1.00 49.15 C
ATOM 12 O2' U B 924 222.766 108.577 2.900 1.00 49.85 O
ATOM 13 C1' U B 924 224.871 109.695 3.256 1.00 49.79 C
ATOM 14 N1 U B 924 226.283 109.268 3.302 1.00 49.38 N
ATOM 15 C2 U B 924 226.756 108.515 2.239 1.00 47.82 C
ATOM 16 O2 U B 924 226.098 108.297 1.237 1.00 48.40 O
ATOM 17 N3 U B 924 228.031 108.032 2.391 1.00 46.29 N
ATOM 18 C4 U B 924 228.876 108.234 3.455 1.00 44.71 C
ATOM 19 O4 U B 924 229.956 107.649 3.486 1.00 42.07 O
ATOM 20 C5 U B 924 228.346 109.070 4.482 1.00 46.61 C
ATOM 21 C6 U B 924 227.100 109.551 4.374 1.00 48.37 C
ATOM 22 P G B 925 222.588 106.654 6.083 1.00 47.93 P
ATOM 23 OP1 G B 925 221.255 106.406 6.707 1.00 48.52 O
ATOM 24 OP2 G B 925 223.812 106.375 6.868 1.00 46.27 O
ATOM 25 O5' G B 925 222.673 105.826 4.731 1.00 48.37 O
TER

Atoms:
C2: (220.324,116.491,7.863)
OP1: (225.060,123.184,4.051)
OP2: (224.757,123.623,6.557)
C4: (222.105,115.003,8.020)
O5': (223.704,121.666,5.437)
C3': (221.675,120.231,8.171)
C1': (220.586,118.687,6.770)
O4': (221.569,119.362,6.002)
C5': (223.525,120.711,6.493)
P: (224.916,122.669,5.443)
O2: (219.143,116.797,8.062)
C4': (222.055,120.518,6.736)
C2': (220.325,119.550,8.006)
O2': (219.296,120.480,7.714)
N1: (221.139,117.381,7.169)
N3: (220.836,115.315,8.292)
N4: (222.574,113.827,8.455)
C6: (222.433,117.051,6.888)
C5: (222.952,115.883,7.287)
O3': (221.640,121.427,8.912)
C4: (228.876,108.234,3.455)
N3: (228.031,108.032,2.391)
OP1: (224.533,111.152,9.490)
OP2: (226.975,110.731,8.810)
C2: (226.756,108.515,2.239)
C1': (224.871,109.695,3.256)
C3': (223.736,108.802,5.138)
O5': (225.128,110.607,7.112)
O4': (224.654,110.743,4.192)
C5': (223.890,111.022,6.504)
P: (225.632,111.273,8.475)
C4': (223.666,110.319,5.175)
C2': (223.960,108.530,3.657)
O2': (222.766,108.577,2.900)
N1: (226.283,109.268,3.302)
O4: (229.956,107.649,3.486)
O2: (226.098,108.297,1.237)
C6: (227.100,109.551,4.374)
C5: (228.346,109.070,4.482)
O3': (222.556,108.190,5.594)
Image (generated by PyMOL):
PyMOL image
show in jmol