Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1279:A1277
Extra
PDB:
ATOM 1 O3' U A1278 258.868 124.655 -6.774 1.00 81.58 O
ATOM 2 P C A1279 257.472 123.904 -6.498 1.00 80.46 P
ATOM 3 OP1 C A1279 256.682 124.869 -5.678 1.00 79.96 O
ATOM 4 OP2 C A1279 257.742 122.525 -5.981 1.00 78.76 O
ATOM 5 O5' C A1279 256.748 123.842 -7.921 1.00 80.31 O
ATOM 6 C5' C A1279 256.306 125.047 -8.588 1.00 79.00 C
ATOM 7 C4' C A1279 255.061 124.777 -9.410 1.00 78.80 C
ATOM 8 O4' C A1279 255.336 123.710 -10.359 1.00 77.90 O
ATOM 9 C3' C A1279 253.838 124.287 -8.645 1.00 79.20 C
ATOM 10 O3' C A1279 253.074 125.350 -8.076 1.00 80.92 O
ATOM 11 C2' C A1279 253.056 123.530 -9.715 1.00 77.69 C
ATOM 12 O2' C A1279 252.293 124.362 -10.562 1.00 75.83 O
ATOM 13 C1' C A1279 254.180 122.905 -10.534 1.00 76.70 C
ATOM 14 N1 C A1279 254.490 121.523 -10.111 1.00 75.67 N
ATOM 15 C2 C A1279 253.501 120.536 -10.234 1.00 76.57 C
ATOM 16 O2 C A1279 252.379 120.856 -10.652 1.00 80.45 O
ATOM 17 N3 C A1279 253.790 119.261 -9.895 1.00 74.69 N
ATOM 18 C4 C A1279 255.003 118.955 -9.445 1.00 73.24 C
ATOM 19 N4 C A1279 255.260 117.680 -9.154 1.00 70.52 N
ATOM 20 C5 C A1279 256.016 119.941 -9.280 1.00 74.75 C
ATOM 21 C6 C A1279 255.720 121.199 -9.620 1.00 74.68 C
ATOM 22 P G A1280 252.481 125.197 -6.580 1.00 81.24 P
ATOM 23 OP1 G A1280 251.305 126.125 -6.493 1.00 79.00 O
ATOM 24 OP2 G A1280 253.618 125.324 -5.634 1.00 83.06 O
ATOM 25 O5' G A1280 251.936 123.706 -6.514 1.00 80.36 O
TER
ATOM 1 O3' G B1276 259.028 115.173 -11.624 1.00 87.86 O
ATOM 2 P U B1277 259.210 116.085 -10.281 1.00 87.49 P
ATOM 3 OP1 U B1277 260.461 115.559 -9.655 1.00 88.23 O
ATOM 4 OP2 U B1277 257.992 116.144 -9.435 1.00 89.37 O
ATOM 5 O5' U B1277 259.554 117.545 -10.845 1.00 83.91 O
ATOM 6 C5' U B1277 260.745 117.738 -11.631 1.00 83.17 C
ATOM 7 C4' U B1277 260.977 119.199 -11.931 1.00 82.41 C
ATOM 8 O4' U B1277 259.978 119.673 -12.866 1.00 82.18 O
ATOM 9 C3' U B1277 260.965 120.164 -10.755 1.00 82.83 C
ATOM 10 O3' U B1277 262.190 120.422 -9.997 1.00 82.77 O
ATOM 11 C2' U B1277 259.710 121.030 -10.911 1.00 81.62 C
ATOM 12 O2' U B1277 259.884 122.409 -10.650 1.00 81.21 O
ATOM 13 C1' U B1277 259.424 120.895 -12.410 1.00 80.92 C
ATOM 14 N1 U B1277 257.986 120.883 -12.721 1.00 78.29 N
ATOM 15 C2 U B1277 257.416 122.047 -13.164 1.00 76.81 C
ATOM 16 O2 U B1277 258.042 123.074 -13.294 1.00 75.73 O
ATOM 17 N3 U B1277 256.076 121.966 -13.448 1.00 78.00 N
ATOM 18 C4 U B1277 255.265 120.852 -13.330 1.00 78.18 C
ATOM 19 O4 U B1277 254.081 120.911 -13.685 1.00 78.51 O
ATOM 20 C5 U B1277 255.932 119.692 -12.850 1.00 77.06 C
ATOM 21 C6 U B1277 257.235 119.745 -12.573 1.00 77.89 C
ATOM 22 P U B1278 262.942 121.849 -10.077 1.00 82.11 P
ATOM 23 OP1 U B1278 262.882 122.411 -11.466 1.00 81.81 O
ATOM 24 OP2 U B1278 264.241 121.566 -9.473 1.00 82.74 O
ATOM 25 O5' U B1278 262.112 122.831 -9.111 1.00 83.11 O
TER
ATOM 2 P C A1279 257.472 123.904 -6.498 1.00 80.46 P
ATOM 3 OP1 C A1279 256.682 124.869 -5.678 1.00 79.96 O
ATOM 4 OP2 C A1279 257.742 122.525 -5.981 1.00 78.76 O
ATOM 5 O5' C A1279 256.748 123.842 -7.921 1.00 80.31 O
ATOM 6 C5' C A1279 256.306 125.047 -8.588 1.00 79.00 C
ATOM 7 C4' C A1279 255.061 124.777 -9.410 1.00 78.80 C
ATOM 8 O4' C A1279 255.336 123.710 -10.359 1.00 77.90 O
ATOM 9 C3' C A1279 253.838 124.287 -8.645 1.00 79.20 C
ATOM 10 O3' C A1279 253.074 125.350 -8.076 1.00 80.92 O
ATOM 11 C2' C A1279 253.056 123.530 -9.715 1.00 77.69 C
ATOM 12 O2' C A1279 252.293 124.362 -10.562 1.00 75.83 O
ATOM 13 C1' C A1279 254.180 122.905 -10.534 1.00 76.70 C
ATOM 14 N1 C A1279 254.490 121.523 -10.111 1.00 75.67 N
ATOM 15 C2 C A1279 253.501 120.536 -10.234 1.00 76.57 C
ATOM 16 O2 C A1279 252.379 120.856 -10.652 1.00 80.45 O
ATOM 17 N3 C A1279 253.790 119.261 -9.895 1.00 74.69 N
ATOM 18 C4 C A1279 255.003 118.955 -9.445 1.00 73.24 C
ATOM 19 N4 C A1279 255.260 117.680 -9.154 1.00 70.52 N
ATOM 20 C5 C A1279 256.016 119.941 -9.280 1.00 74.75 C
ATOM 21 C6 C A1279 255.720 121.199 -9.620 1.00 74.68 C
ATOM 22 P G A1280 252.481 125.197 -6.580 1.00 81.24 P
ATOM 23 OP1 G A1280 251.305 126.125 -6.493 1.00 79.00 O
ATOM 24 OP2 G A1280 253.618 125.324 -5.634 1.00 83.06 O
ATOM 25 O5' G A1280 251.936 123.706 -6.514 1.00 80.36 O
TER
ATOM 1 O3' G B1276 259.028 115.173 -11.624 1.00 87.86 O
ATOM 2 P U B1277 259.210 116.085 -10.281 1.00 87.49 P
ATOM 3 OP1 U B1277 260.461 115.559 -9.655 1.00 88.23 O
ATOM 4 OP2 U B1277 257.992 116.144 -9.435 1.00 89.37 O
ATOM 5 O5' U B1277 259.554 117.545 -10.845 1.00 83.91 O
ATOM 6 C5' U B1277 260.745 117.738 -11.631 1.00 83.17 C
ATOM 7 C4' U B1277 260.977 119.199 -11.931 1.00 82.41 C
ATOM 8 O4' U B1277 259.978 119.673 -12.866 1.00 82.18 O
ATOM 9 C3' U B1277 260.965 120.164 -10.755 1.00 82.83 C
ATOM 10 O3' U B1277 262.190 120.422 -9.997 1.00 82.77 O
ATOM 11 C2' U B1277 259.710 121.030 -10.911 1.00 81.62 C
ATOM 12 O2' U B1277 259.884 122.409 -10.650 1.00 81.21 O
ATOM 13 C1' U B1277 259.424 120.895 -12.410 1.00 80.92 C
ATOM 14 N1 U B1277 257.986 120.883 -12.721 1.00 78.29 N
ATOM 15 C2 U B1277 257.416 122.047 -13.164 1.00 76.81 C
ATOM 16 O2 U B1277 258.042 123.074 -13.294 1.00 75.73 O
ATOM 17 N3 U B1277 256.076 121.966 -13.448 1.00 78.00 N
ATOM 18 C4 U B1277 255.265 120.852 -13.330 1.00 78.18 C
ATOM 19 O4 U B1277 254.081 120.911 -13.685 1.00 78.51 O
ATOM 20 C5 U B1277 255.932 119.692 -12.850 1.00 77.06 C
ATOM 21 C6 U B1277 257.235 119.745 -12.573 1.00 77.89 C
ATOM 22 P U B1278 262.942 121.849 -10.077 1.00 82.11 P
ATOM 23 OP1 U B1278 262.882 122.411 -11.466 1.00 81.81 O
ATOM 24 OP2 U B1278 264.241 121.566 -9.473 1.00 82.74 O
ATOM 25 O5' U B1278 262.112 122.831 -9.111 1.00 83.11 O
TER
Atoms:
C2: (253.501,120.536,-10.234)
OP1: (256.682,124.869,-5.678)
OP2: (257.742,122.525,-5.981)
C4: (255.003,118.955,-9.445)
O5': (256.748,123.842,-7.921)
C3': (253.838,124.287,-8.645)
C1': (254.180,122.905,-10.534)
O4': (255.336,123.710,-10.359)
C5': (256.306,125.047,-8.588)
P: (257.472,123.904,-6.498)
O2: (252.379,120.856,-10.652)
C4': (255.061,124.777,-9.410)
C2': (253.056,123.530,-9.715)
O2': (252.293,124.362,-10.562)
N1: (254.490,121.523,-10.111)
N3: (253.790,119.261,-9.895)
N4: (255.260,117.680,-9.154)
C6: (255.720,121.199,-9.620)
C5: (256.016,119.941,-9.280)
O3': (253.074,125.350,-8.076)
OP1: (256.682,124.869,-5.678)
OP2: (257.742,122.525,-5.981)
C4: (255.003,118.955,-9.445)
O5': (256.748,123.842,-7.921)
C3': (253.838,124.287,-8.645)
C1': (254.180,122.905,-10.534)
O4': (255.336,123.710,-10.359)
C5': (256.306,125.047,-8.588)
P: (257.472,123.904,-6.498)
O2: (252.379,120.856,-10.652)
C4': (255.061,124.777,-9.410)
C2': (253.056,123.530,-9.715)
O2': (252.293,124.362,-10.562)
N1: (254.490,121.523,-10.111)
N3: (253.790,119.261,-9.895)
N4: (255.260,117.680,-9.154)
C6: (255.720,121.199,-9.620)
C5: (256.016,119.941,-9.280)
O3': (253.074,125.350,-8.076)
C4: (255.265,120.852,-13.330)
N3: (256.076,121.966,-13.448)
OP1: (260.461,115.559,-9.655)
OP2: (257.992,116.144,-9.435)
C2: (257.416,122.047,-13.164)
C1': (259.424,120.895,-12.410)
C3': (260.965,120.164,-10.755)
O5': (259.554,117.545,-10.845)
O4': (259.978,119.673,-12.866)
C5': (260.745,117.738,-11.631)
P: (259.210,116.085,-10.281)
C4': (260.977,119.199,-11.931)
C2': (259.710,121.030,-10.911)
O2': (259.884,122.409,-10.650)
N1: (257.986,120.883,-12.721)
O4: (254.081,120.911,-13.685)
O2: (258.042,123.074,-13.294)
C6: (257.235,119.745,-12.573)
C5: (255.932,119.692,-12.850)
O3': (262.190,120.422,-9.997)
N3: (256.076,121.966,-13.448)
OP1: (260.461,115.559,-9.655)
OP2: (257.992,116.144,-9.435)
C2: (257.416,122.047,-13.164)
C1': (259.424,120.895,-12.410)
C3': (260.965,120.164,-10.755)
O5': (259.554,117.545,-10.845)
O4': (259.978,119.673,-12.866)
C5': (260.745,117.738,-11.631)
P: (259.210,116.085,-10.281)
C4': (260.977,119.199,-11.931)
C2': (259.710,121.030,-10.911)
O2': (259.884,122.409,-10.650)
N1: (257.986,120.883,-12.721)
O4: (254.081,120.911,-13.685)
O2: (258.042,123.074,-13.294)
C6: (257.235,119.745,-12.573)
C5: (255.932,119.692,-12.850)
O3': (262.190,120.422,-9.997)
Image (generated by PyMOL):