Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1379:A1512
Extra
PDB:
ATOM 1 O3' G A1378 193.348 106.433 -10.607 1.00 64.09 O
ATOM 2 P C A1379 193.021 104.864 -10.724 1.00 63.67 P
ATOM 3 OP1 C A1379 192.175 104.535 -9.548 1.00 65.41 O
ATOM 4 OP2 C A1379 194.271 104.098 -10.904 1.00 63.90 O
ATOM 5 O5' C A1379 192.122 104.770 -12.051 1.00 64.56 O
ATOM 6 C5' C A1379 190.815 105.387 -12.098 1.00 64.56 C
ATOM 7 C4' C A1379 190.262 105.409 -13.509 1.00 64.42 C
ATOM 8 O4' C A1379 191.244 106.015 -14.394 1.00 67.70 O
ATOM 9 C3' C A1379 189.929 104.084 -14.179 1.00 63.81 C
ATOM 10 O3' C A1379 188.675 103.569 -13.804 1.00 62.33 O
ATOM 11 C2' C A1379 189.976 104.448 -15.661 1.00 65.78 C
ATOM 12 O2' C A1379 188.805 105.067 -16.172 1.00 64.53 O
ATOM 13 C1' C A1379 191.135 105.448 -15.693 1.00 67.33 C
ATOM 14 N1 C A1379 192.400 104.761 -16.042 1.00 68.62 N
ATOM 15 C2 C A1379 192.563 104.322 -17.356 1.00 69.67 C
ATOM 16 O2 C A1379 191.703 104.617 -18.190 1.00 72.33 O
ATOM 17 N3 C A1379 193.651 103.595 -17.687 1.00 70.92 N
ATOM 18 C4 C A1379 194.573 103.322 -16.768 1.00 69.76 C
ATOM 19 N4 C A1379 195.614 102.564 -17.138 1.00 66.73 N
ATOM 20 C5 C A1379 194.464 103.805 -15.426 1.00 69.35 C
ATOM 21 C6 C A1379 193.372 104.515 -15.111 1.00 68.24 C
ATOM 22 P C A1380 188.502 101.982 -13.587 1.00 63.85 P
ATOM 23 OP1 C A1380 187.091 101.745 -13.189 1.00 64.57 O
ATOM 24 OP2 C A1380 189.582 101.455 -12.714 1.00 61.98 O
ATOM 25 O5' C A1380 188.699 101.385 -15.039 1.00 63.33 O
TER
ATOM 1 O3' C B1511 200.078 99.978 -16.165 1.00 63.75 O
ATOM 2 P U B1512 198.973 100.741 -15.276 1.00 63.69 P
ATOM 3 OP1 U B1512 197.963 99.695 -14.930 1.00 60.44 O
ATOM 4 OP2 U B1512 198.584 101.998 -15.983 1.00 59.47 O
ATOM 5 O5' U B1512 199.754 101.124 -13.938 1.00 64.06 O
ATOM 6 C5' U B1512 200.338 100.106 -13.116 1.00 64.25 C
ATOM 7 C4' U B1512 201.003 100.716 -11.904 1.00 66.91 C
ATOM 8 O4' U B1512 202.115 101.568 -12.337 1.00 67.79 O
ATOM 9 C3' U B1512 200.124 101.572 -10.977 1.00 67.99 C
ATOM 10 O3' U B1512 200.567 101.529 -9.596 1.00 65.95 O
ATOM 11 C2' U B1512 200.542 102.994 -11.358 1.00 68.39 C
ATOM 12 O2' U B1512 200.305 103.942 -10.336 1.00 69.65 O
ATOM 13 C1' U B1512 202.028 102.806 -11.668 1.00 68.08 C
ATOM 14 N1 U B1512 202.697 103.875 -12.439 1.00 68.25 N
ATOM 15 C2 U B1512 203.809 104.491 -11.836 1.00 71.77 C
ATOM 16 O2 U B1512 204.317 104.095 -10.788 1.00 76.34 O
ATOM 17 N3 U B1512 204.317 105.577 -12.505 1.00 69.88 N
ATOM 18 C4 U B1512 203.879 106.089 -13.695 1.00 68.50 C
ATOM 19 O4 U B1512 204.385 107.138 -14.111 1.00 68.21 O
ATOM 20 C5 U B1512 202.783 105.366 -14.297 1.00 65.10 C
ATOM 21 C6 U B1512 202.248 104.308 -13.664 1.00 64.93 C
TER
ATOM 2 P C A1379 193.021 104.864 -10.724 1.00 63.67 P
ATOM 3 OP1 C A1379 192.175 104.535 -9.548 1.00 65.41 O
ATOM 4 OP2 C A1379 194.271 104.098 -10.904 1.00 63.90 O
ATOM 5 O5' C A1379 192.122 104.770 -12.051 1.00 64.56 O
ATOM 6 C5' C A1379 190.815 105.387 -12.098 1.00 64.56 C
ATOM 7 C4' C A1379 190.262 105.409 -13.509 1.00 64.42 C
ATOM 8 O4' C A1379 191.244 106.015 -14.394 1.00 67.70 O
ATOM 9 C3' C A1379 189.929 104.084 -14.179 1.00 63.81 C
ATOM 10 O3' C A1379 188.675 103.569 -13.804 1.00 62.33 O
ATOM 11 C2' C A1379 189.976 104.448 -15.661 1.00 65.78 C
ATOM 12 O2' C A1379 188.805 105.067 -16.172 1.00 64.53 O
ATOM 13 C1' C A1379 191.135 105.448 -15.693 1.00 67.33 C
ATOM 14 N1 C A1379 192.400 104.761 -16.042 1.00 68.62 N
ATOM 15 C2 C A1379 192.563 104.322 -17.356 1.00 69.67 C
ATOM 16 O2 C A1379 191.703 104.617 -18.190 1.00 72.33 O
ATOM 17 N3 C A1379 193.651 103.595 -17.687 1.00 70.92 N
ATOM 18 C4 C A1379 194.573 103.322 -16.768 1.00 69.76 C
ATOM 19 N4 C A1379 195.614 102.564 -17.138 1.00 66.73 N
ATOM 20 C5 C A1379 194.464 103.805 -15.426 1.00 69.35 C
ATOM 21 C6 C A1379 193.372 104.515 -15.111 1.00 68.24 C
ATOM 22 P C A1380 188.502 101.982 -13.587 1.00 63.85 P
ATOM 23 OP1 C A1380 187.091 101.745 -13.189 1.00 64.57 O
ATOM 24 OP2 C A1380 189.582 101.455 -12.714 1.00 61.98 O
ATOM 25 O5' C A1380 188.699 101.385 -15.039 1.00 63.33 O
TER
ATOM 1 O3' C B1511 200.078 99.978 -16.165 1.00 63.75 O
ATOM 2 P U B1512 198.973 100.741 -15.276 1.00 63.69 P
ATOM 3 OP1 U B1512 197.963 99.695 -14.930 1.00 60.44 O
ATOM 4 OP2 U B1512 198.584 101.998 -15.983 1.00 59.47 O
ATOM 5 O5' U B1512 199.754 101.124 -13.938 1.00 64.06 O
ATOM 6 C5' U B1512 200.338 100.106 -13.116 1.00 64.25 C
ATOM 7 C4' U B1512 201.003 100.716 -11.904 1.00 66.91 C
ATOM 8 O4' U B1512 202.115 101.568 -12.337 1.00 67.79 O
ATOM 9 C3' U B1512 200.124 101.572 -10.977 1.00 67.99 C
ATOM 10 O3' U B1512 200.567 101.529 -9.596 1.00 65.95 O
ATOM 11 C2' U B1512 200.542 102.994 -11.358 1.00 68.39 C
ATOM 12 O2' U B1512 200.305 103.942 -10.336 1.00 69.65 O
ATOM 13 C1' U B1512 202.028 102.806 -11.668 1.00 68.08 C
ATOM 14 N1 U B1512 202.697 103.875 -12.439 1.00 68.25 N
ATOM 15 C2 U B1512 203.809 104.491 -11.836 1.00 71.77 C
ATOM 16 O2 U B1512 204.317 104.095 -10.788 1.00 76.34 O
ATOM 17 N3 U B1512 204.317 105.577 -12.505 1.00 69.88 N
ATOM 18 C4 U B1512 203.879 106.089 -13.695 1.00 68.50 C
ATOM 19 O4 U B1512 204.385 107.138 -14.111 1.00 68.21 O
ATOM 20 C5 U B1512 202.783 105.366 -14.297 1.00 65.10 C
ATOM 21 C6 U B1512 202.248 104.308 -13.664 1.00 64.93 C
TER
Atoms:
C2: (192.563,104.322,-17.356)
OP1: (192.175,104.535,-9.548)
OP2: (194.271,104.098,-10.904)
C4: (194.573,103.322,-16.768)
O5': (192.122,104.770,-12.051)
C3': (189.929,104.084,-14.179)
C1': (191.135,105.448,-15.693)
O4': (191.244,106.015,-14.394)
C5': (190.815,105.387,-12.098)
P: (193.021,104.864,-10.724)
O2: (191.703,104.617,-18.190)
C4': (190.262,105.409,-13.509)
C2': (189.976,104.448,-15.661)
O2': (188.805,105.067,-16.172)
N1: (192.400,104.761,-16.042)
N3: (193.651,103.595,-17.687)
N4: (195.614,102.564,-17.138)
C6: (193.372,104.515,-15.111)
C5: (194.464,103.805,-15.426)
O3': (188.675,103.569,-13.804)
OP1: (192.175,104.535,-9.548)
OP2: (194.271,104.098,-10.904)
C4: (194.573,103.322,-16.768)
O5': (192.122,104.770,-12.051)
C3': (189.929,104.084,-14.179)
C1': (191.135,105.448,-15.693)
O4': (191.244,106.015,-14.394)
C5': (190.815,105.387,-12.098)
P: (193.021,104.864,-10.724)
O2: (191.703,104.617,-18.190)
C4': (190.262,105.409,-13.509)
C2': (189.976,104.448,-15.661)
O2': (188.805,105.067,-16.172)
N1: (192.400,104.761,-16.042)
N3: (193.651,103.595,-17.687)
N4: (195.614,102.564,-17.138)
C6: (193.372,104.515,-15.111)
C5: (194.464,103.805,-15.426)
O3': (188.675,103.569,-13.804)
C4: (203.879,106.089,-13.695)
N3: (204.317,105.577,-12.505)
OP1: (197.963,99.695,-14.930)
OP2: (198.584,101.998,-15.983)
C2: (203.809,104.491,-11.836)
C1': (202.028,102.806,-11.668)
C3': (200.124,101.572,-10.977)
O5': (199.754,101.124,-13.938)
O4': (202.115,101.568,-12.337)
C5': (200.338,100.106,-13.116)
P: (198.973,100.741,-15.276)
C4': (201.003,100.716,-11.904)
C2': (200.542,102.994,-11.358)
O2': (200.305,103.942,-10.336)
N1: (202.697,103.875,-12.439)
O4: (204.385,107.138,-14.111)
O2: (204.317,104.095,-10.788)
C6: (202.248,104.308,-13.664)
C5: (202.783,105.366,-14.297)
O3': (200.567,101.529,-9.596)
N3: (204.317,105.577,-12.505)
OP1: (197.963,99.695,-14.930)
OP2: (198.584,101.998,-15.983)
C2: (203.809,104.491,-11.836)
C1': (202.028,102.806,-11.668)
C3': (200.124,101.572,-10.977)
O5': (199.754,101.124,-13.938)
O4': (202.115,101.568,-12.337)
C5': (200.338,100.106,-13.116)
P: (198.973,100.741,-15.276)
C4': (201.003,100.716,-11.904)
C2': (200.542,102.994,-11.358)
O2': (200.305,103.942,-10.336)
N1: (202.697,103.875,-12.439)
O4: (204.385,107.138,-14.111)
O2: (204.317,104.095,-10.788)
C6: (202.248,104.308,-13.664)
C5: (202.783,105.366,-14.297)
O3': (200.567,101.529,-9.596)
Image (generated by PyMOL):