Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A163:A162
Extra
PDB:
ATOM 1 O3' U A 162 102.102 44.266 1.216 1.00 70.58 O
ATOM 2 P C A 163 102.211 43.680 -0.276 1.00 70.87 P
ATOM 3 OP1 C A 163 102.660 44.807 -1.149 1.00 72.72 O
ATOM 4 OP2 C A 163 100.956 42.983 -0.636 1.00 70.03 O
ATOM 5 O5' C A 163 103.385 42.633 -0.158 1.00 70.90 O
ATOM 6 C5' C A 163 104.762 43.045 -0.136 1.00 73.15 C
ATOM 7 C4' C A 163 105.595 42.058 -0.919 1.00 75.33 C
ATOM 8 O4' C A 163 105.605 40.782 -0.220 1.00 76.61 O
ATOM 9 C3' C A 163 105.021 41.752 -2.295 1.00 76.00 C
ATOM 10 O3' C A 163 105.488 42.677 -3.260 1.00 76.85 O
ATOM 11 C2' C A 163 105.501 40.331 -2.554 1.00 76.60 C
ATOM 12 O2' C A 163 106.836 40.300 -3.015 1.00 78.15 O
ATOM 13 C1' C A 163 105.435 39.719 -1.150 1.00 76.38 C
ATOM 14 N1 C A 163 104.134 39.063 -0.878 1.00 75.42 N
ATOM 15 C2 C A 163 103.813 37.870 -1.540 1.00 75.77 C
ATOM 16 O2 C A 163 104.649 37.354 -2.292 1.00 77.65 O
ATOM 17 N3 C A 163 102.601 37.308 -1.338 1.00 75.46 N
ATOM 18 C4 C A 163 101.731 37.881 -0.503 1.00 75.93 C
ATOM 19 N4 C A 163 100.544 37.306 -0.343 1.00 76.46 N
ATOM 20 C5 C A 163 102.040 39.072 0.205 1.00 75.91 C
ATOM 21 C6 C A 163 103.239 39.622 -0.008 1.00 75.90 C
ATOM 22 P C A 164 104.505 43.179 -4.434 1.00 77.62 P
ATOM 23 OP1 C A 164 105.254 44.279 -5.111 1.00 78.89 O
ATOM 24 OP2 C A 164 103.146 43.491 -3.895 1.00 78.16 O
ATOM 25 O5' C A 164 104.430 41.915 -5.416 1.00 76.09 O
TER
ATOM 1 O3' A B 161 98.651 39.859 3.640 1.00 69.06 O
ATOM 2 P U B 162 98.182 40.352 2.180 1.00 69.99 P
ATOM 3 OP1 U B 162 98.615 39.309 1.197 1.00 70.66 O
ATOM 4 OP2 U B 162 96.753 40.761 2.229 1.00 70.27 O
ATOM 5 O5' U B 162 99.092 41.629 1.886 1.00 71.12 O
ATOM 6 C5' U B 162 98.926 42.865 2.618 1.00 71.04 C
ATOM 7 C4' U B 162 99.904 43.920 2.119 1.00 70.60 C
ATOM 8 O4' U B 162 99.731 45.129 2.903 1.00 70.89 O
ATOM 9 C3' U B 162 101.383 43.555 2.235 1.00 70.11 C
ATOM 10 O3' U B 162 102.102 44.266 1.216 1.00 70.58 O
ATOM 11 C2' U B 162 101.771 44.182 3.569 1.00 70.15 C
ATOM 12 O2' U B 162 103.151 44.448 3.692 1.00 69.31 O
ATOM 13 C1' U B 162 100.952 45.470 3.519 1.00 71.55 C
ATOM 14 N1 U B 162 100.671 46.129 4.803 1.00 74.09 N
ATOM 15 C2 U B 162 101.610 47.032 5.274 1.00 76.92 C
ATOM 16 O2 U B 162 102.671 47.255 4.701 1.00 79.90 O
ATOM 17 N3 U B 162 101.268 47.662 6.443 1.00 77.99 N
ATOM 18 C4 U B 162 100.116 47.479 7.178 1.00 77.78 C
ATOM 19 O4 U B 162 99.939 48.149 8.195 1.00 78.64 O
ATOM 20 C5 U B 162 99.211 46.510 6.642 1.00 76.47 C
ATOM 21 C6 U B 162 99.513 45.883 5.505 1.00 75.08 C
ATOM 22 P C B 163 102.211 43.680 -0.276 1.00 70.87 P
ATOM 23 OP1 C B 163 102.660 44.807 -1.149 1.00 72.72 O
ATOM 24 OP2 C B 163 100.956 42.983 -0.636 1.00 70.03 O
ATOM 25 O5' C B 163 103.385 42.633 -0.158 1.00 70.90 O
TER
ATOM 2 P C A 163 102.211 43.680 -0.276 1.00 70.87 P
ATOM 3 OP1 C A 163 102.660 44.807 -1.149 1.00 72.72 O
ATOM 4 OP2 C A 163 100.956 42.983 -0.636 1.00 70.03 O
ATOM 5 O5' C A 163 103.385 42.633 -0.158 1.00 70.90 O
ATOM 6 C5' C A 163 104.762 43.045 -0.136 1.00 73.15 C
ATOM 7 C4' C A 163 105.595 42.058 -0.919 1.00 75.33 C
ATOM 8 O4' C A 163 105.605 40.782 -0.220 1.00 76.61 O
ATOM 9 C3' C A 163 105.021 41.752 -2.295 1.00 76.00 C
ATOM 10 O3' C A 163 105.488 42.677 -3.260 1.00 76.85 O
ATOM 11 C2' C A 163 105.501 40.331 -2.554 1.00 76.60 C
ATOM 12 O2' C A 163 106.836 40.300 -3.015 1.00 78.15 O
ATOM 13 C1' C A 163 105.435 39.719 -1.150 1.00 76.38 C
ATOM 14 N1 C A 163 104.134 39.063 -0.878 1.00 75.42 N
ATOM 15 C2 C A 163 103.813 37.870 -1.540 1.00 75.77 C
ATOM 16 O2 C A 163 104.649 37.354 -2.292 1.00 77.65 O
ATOM 17 N3 C A 163 102.601 37.308 -1.338 1.00 75.46 N
ATOM 18 C4 C A 163 101.731 37.881 -0.503 1.00 75.93 C
ATOM 19 N4 C A 163 100.544 37.306 -0.343 1.00 76.46 N
ATOM 20 C5 C A 163 102.040 39.072 0.205 1.00 75.91 C
ATOM 21 C6 C A 163 103.239 39.622 -0.008 1.00 75.90 C
ATOM 22 P C A 164 104.505 43.179 -4.434 1.00 77.62 P
ATOM 23 OP1 C A 164 105.254 44.279 -5.111 1.00 78.89 O
ATOM 24 OP2 C A 164 103.146 43.491 -3.895 1.00 78.16 O
ATOM 25 O5' C A 164 104.430 41.915 -5.416 1.00 76.09 O
TER
ATOM 1 O3' A B 161 98.651 39.859 3.640 1.00 69.06 O
ATOM 2 P U B 162 98.182 40.352 2.180 1.00 69.99 P
ATOM 3 OP1 U B 162 98.615 39.309 1.197 1.00 70.66 O
ATOM 4 OP2 U B 162 96.753 40.761 2.229 1.00 70.27 O
ATOM 5 O5' U B 162 99.092 41.629 1.886 1.00 71.12 O
ATOM 6 C5' U B 162 98.926 42.865 2.618 1.00 71.04 C
ATOM 7 C4' U B 162 99.904 43.920 2.119 1.00 70.60 C
ATOM 8 O4' U B 162 99.731 45.129 2.903 1.00 70.89 O
ATOM 9 C3' U B 162 101.383 43.555 2.235 1.00 70.11 C
ATOM 10 O3' U B 162 102.102 44.266 1.216 1.00 70.58 O
ATOM 11 C2' U B 162 101.771 44.182 3.569 1.00 70.15 C
ATOM 12 O2' U B 162 103.151 44.448 3.692 1.00 69.31 O
ATOM 13 C1' U B 162 100.952 45.470 3.519 1.00 71.55 C
ATOM 14 N1 U B 162 100.671 46.129 4.803 1.00 74.09 N
ATOM 15 C2 U B 162 101.610 47.032 5.274 1.00 76.92 C
ATOM 16 O2 U B 162 102.671 47.255 4.701 1.00 79.90 O
ATOM 17 N3 U B 162 101.268 47.662 6.443 1.00 77.99 N
ATOM 18 C4 U B 162 100.116 47.479 7.178 1.00 77.78 C
ATOM 19 O4 U B 162 99.939 48.149 8.195 1.00 78.64 O
ATOM 20 C5 U B 162 99.211 46.510 6.642 1.00 76.47 C
ATOM 21 C6 U B 162 99.513 45.883 5.505 1.00 75.08 C
ATOM 22 P C B 163 102.211 43.680 -0.276 1.00 70.87 P
ATOM 23 OP1 C B 163 102.660 44.807 -1.149 1.00 72.72 O
ATOM 24 OP2 C B 163 100.956 42.983 -0.636 1.00 70.03 O
ATOM 25 O5' C B 163 103.385 42.633 -0.158 1.00 70.90 O
TER
Atoms:
C2: (103.813,37.870,-1.540)
OP1: (102.660,44.807,-1.149)
OP2: (100.956,42.983,-0.636)
C4: (101.731,37.881,-0.503)
O5': (103.385,42.633,-0.158)
C3': (105.021,41.752,-2.295)
C1': (105.435,39.719,-1.150)
O4': (105.605,40.782,-0.220)
C5': (104.762,43.045,-0.136)
P: (102.211,43.680,-0.276)
O2: (104.649,37.354,-2.292)
C4': (105.595,42.058,-0.919)
C2': (105.501,40.331,-2.554)
O2': (106.836,40.300,-3.015)
N1: (104.134,39.063,-0.878)
N3: (102.601,37.308,-1.338)
N4: (100.544,37.306,-0.343)
C6: (103.239,39.622,-0.008)
C5: (102.040,39.072,0.205)
O3': (105.488,42.677,-3.260)
OP1: (102.660,44.807,-1.149)
OP2: (100.956,42.983,-0.636)
C4: (101.731,37.881,-0.503)
O5': (103.385,42.633,-0.158)
C3': (105.021,41.752,-2.295)
C1': (105.435,39.719,-1.150)
O4': (105.605,40.782,-0.220)
C5': (104.762,43.045,-0.136)
P: (102.211,43.680,-0.276)
O2: (104.649,37.354,-2.292)
C4': (105.595,42.058,-0.919)
C2': (105.501,40.331,-2.554)
O2': (106.836,40.300,-3.015)
N1: (104.134,39.063,-0.878)
N3: (102.601,37.308,-1.338)
N4: (100.544,37.306,-0.343)
C6: (103.239,39.622,-0.008)
C5: (102.040,39.072,0.205)
O3': (105.488,42.677,-3.260)
C4: (100.116,47.479,7.178)
N3: (101.268,47.662,6.443)
OP1: (98.615,39.309,1.197)
OP2: (96.753,40.761,2.229)
C2: (101.610,47.032,5.274)
C1': (100.952,45.470,3.519)
C3': (101.383,43.555,2.235)
O5': (99.092,41.629,1.886)
O4': (99.731,45.129,2.903)
C5': (98.926,42.865,2.618)
P: (98.182,40.352,2.180)
C4': (99.904,43.920,2.119)
C2': (101.771,44.182,3.569)
O2': (103.151,44.448,3.692)
N1: (100.671,46.129,4.803)
O4: (99.939,48.149,8.195)
O2: (102.671,47.255,4.701)
C6: (99.513,45.883,5.505)
C5: (99.211,46.510,6.642)
O3': (102.102,44.266,1.216)
N3: (101.268,47.662,6.443)
OP1: (98.615,39.309,1.197)
OP2: (96.753,40.761,2.229)
C2: (101.610,47.032,5.274)
C1': (100.952,45.470,3.519)
C3': (101.383,43.555,2.235)
O5': (99.092,41.629,1.886)
O4': (99.731,45.129,2.903)
C5': (98.926,42.865,2.618)
P: (98.182,40.352,2.180)
C4': (99.904,43.920,2.119)
C2': (101.771,44.182,3.569)
O2': (103.151,44.448,3.692)
N1: (100.671,46.129,4.803)
O4: (99.939,48.149,8.195)
O2: (102.671,47.255,4.701)
C6: (99.513,45.883,5.505)
C5: (99.211,46.510,6.642)
O3': (102.102,44.266,1.216)
Image (generated by PyMOL):