Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X25:X23
Extra
PDB:
ATOM 1 O3' C A 24 29.426 -82.653 -74.754 1.00 73.47 O
ATOM 2 P C A 25 30.012 -81.300 -75.399 1.00 67.04 P
ATOM 3 OP1 C A 25 30.894 -80.674 -74.375 1.00 72.50 O
ATOM 4 OP2 C A 25 28.853 -80.523 -75.920 1.00 71.90 O
ATOM 5 O5' C A 25 30.893 -81.844 -76.611 1.00 69.88 O
ATOM 6 C5' C A 25 32.170 -82.414 -76.379 1.00 71.77 C
ATOM 7 C4' C A 25 32.843 -82.805 -77.670 1.00 72.92 C
ATOM 8 O4' C A 25 32.101 -83.872 -78.309 1.00 73.16 O
ATOM 9 C3' C A 25 32.917 -81.729 -78.737 1.00 75.00 C
ATOM 10 O3' C A 25 33.957 -80.801 -78.512 1.00 77.10 O
ATOM 11 C2' C A 25 33.092 -82.543 -80.010 1.00 75.58 C
ATOM 12 O2' C A 25 34.435 -82.980 -80.145 1.00 74.94 O
ATOM 13 C1' C A 25 32.215 -83.759 -79.712 1.00 75.40 C
ATOM 14 N1 C A 25 30.864 -83.624 -80.282 1.00 84.83 N
ATOM 15 C2 C A 25 30.674 -83.914 -81.632 1.00 88.67 C
ATOM 16 O2 C A 25 31.647 -84.266 -82.310 1.00 90.94 O
ATOM 17 N3 C A 25 29.439 -83.797 -82.166 1.00 91.80 N
ATOM 18 C4 C A 25 28.417 -83.414 -81.400 1.00 92.01 C
ATOM 19 N4 C A 25 27.216 -83.314 -81.970 1.00 96.20 N
ATOM 20 C5 C A 25 28.581 -83.116 -80.017 1.00 88.41 C
ATOM 21 C6 C A 25 29.812 -83.234 -79.503 1.00 85.36 C
ATOM 22 P C A 26 33.817 -79.298 -79.054 1.00 76.14 P
ATOM 23 OP1 C A 26 32.444 -78.837 -78.719 1.00 74.20 O
ATOM 24 OP2 C A 26 34.975 -78.537 -78.527 1.00 78.79 O
ATOM 25 O5' C A 26 33.956 -79.477 -80.629 1.00 78.97 O
TER
ATOM 1 O3' U B 22 22.102 -82.498 -82.310 1.00 67.73 O
ATOM 2 P U B 23 23.326 -82.994 -81.393 1.00 74.97 P
ATOM 3 OP1 U B 23 23.673 -84.363 -81.844 1.00 83.87 O
ATOM 4 OP2 U B 23 24.368 -81.940 -81.440 1.00 80.14 O
ATOM 5 O5' U B 23 22.684 -83.055 -79.936 1.00 69.75 O
ATOM 6 C5' U B 23 22.076 -81.908 -79.356 1.00 67.50 C
ATOM 7 C4' U B 23 21.934 -82.039 -77.858 1.00 63.39 C
ATOM 8 O4' U B 23 20.774 -82.861 -77.548 1.00 64.44 O
ATOM 9 C3' U B 23 23.124 -82.675 -77.135 1.00 60.50 C
ATOM 10 O3' U B 23 23.400 -81.961 -75.936 1.00 59.12 O
ATOM 11 C2' U B 23 22.622 -84.070 -76.780 1.00 61.37 C
ATOM 12 O2' U B 23 23.211 -84.619 -75.622 1.00 61.12 O
ATOM 13 C1' U B 23 21.133 -83.827 -76.585 1.00 62.56 C
ATOM 14 N1 U B 23 20.304 -85.032 -76.785 1.00 72.06 N
ATOM 15 C2 U B 23 19.757 -85.597 -75.650 1.00 71.92 C
ATOM 16 O2 U B 23 19.913 -85.128 -74.538 1.00 69.28 O
ATOM 17 N3 U B 23 19.007 -86.722 -75.864 1.00 76.07 N
ATOM 18 C4 U B 23 18.764 -87.334 -77.078 1.00 80.77 C
ATOM 19 O4 U B 23 18.066 -88.352 -77.113 1.00 83.07 O
ATOM 20 C5 U B 23 19.378 -86.695 -78.205 1.00 82.31 C
ATOM 21 C6 U B 23 20.112 -85.593 -78.023 1.00 77.67 C
ATOM 22 P C B 24 24.806 -81.210 -75.771 1.00 76.15 P
ATOM 23 OP1 C B 24 25.024 -80.422 -77.015 1.00 79.55 O
ATOM 24 OP2 C B 24 24.773 -80.494 -74.467 1.00 73.28 O
ATOM 25 O5' C B 24 25.847 -82.417 -75.706 1.00 74.72 O
TER
ATOM 2 P C A 25 30.012 -81.300 -75.399 1.00 67.04 P
ATOM 3 OP1 C A 25 30.894 -80.674 -74.375 1.00 72.50 O
ATOM 4 OP2 C A 25 28.853 -80.523 -75.920 1.00 71.90 O
ATOM 5 O5' C A 25 30.893 -81.844 -76.611 1.00 69.88 O
ATOM 6 C5' C A 25 32.170 -82.414 -76.379 1.00 71.77 C
ATOM 7 C4' C A 25 32.843 -82.805 -77.670 1.00 72.92 C
ATOM 8 O4' C A 25 32.101 -83.872 -78.309 1.00 73.16 O
ATOM 9 C3' C A 25 32.917 -81.729 -78.737 1.00 75.00 C
ATOM 10 O3' C A 25 33.957 -80.801 -78.512 1.00 77.10 O
ATOM 11 C2' C A 25 33.092 -82.543 -80.010 1.00 75.58 C
ATOM 12 O2' C A 25 34.435 -82.980 -80.145 1.00 74.94 O
ATOM 13 C1' C A 25 32.215 -83.759 -79.712 1.00 75.40 C
ATOM 14 N1 C A 25 30.864 -83.624 -80.282 1.00 84.83 N
ATOM 15 C2 C A 25 30.674 -83.914 -81.632 1.00 88.67 C
ATOM 16 O2 C A 25 31.647 -84.266 -82.310 1.00 90.94 O
ATOM 17 N3 C A 25 29.439 -83.797 -82.166 1.00 91.80 N
ATOM 18 C4 C A 25 28.417 -83.414 -81.400 1.00 92.01 C
ATOM 19 N4 C A 25 27.216 -83.314 -81.970 1.00 96.20 N
ATOM 20 C5 C A 25 28.581 -83.116 -80.017 1.00 88.41 C
ATOM 21 C6 C A 25 29.812 -83.234 -79.503 1.00 85.36 C
ATOM 22 P C A 26 33.817 -79.298 -79.054 1.00 76.14 P
ATOM 23 OP1 C A 26 32.444 -78.837 -78.719 1.00 74.20 O
ATOM 24 OP2 C A 26 34.975 -78.537 -78.527 1.00 78.79 O
ATOM 25 O5' C A 26 33.956 -79.477 -80.629 1.00 78.97 O
TER
ATOM 1 O3' U B 22 22.102 -82.498 -82.310 1.00 67.73 O
ATOM 2 P U B 23 23.326 -82.994 -81.393 1.00 74.97 P
ATOM 3 OP1 U B 23 23.673 -84.363 -81.844 1.00 83.87 O
ATOM 4 OP2 U B 23 24.368 -81.940 -81.440 1.00 80.14 O
ATOM 5 O5' U B 23 22.684 -83.055 -79.936 1.00 69.75 O
ATOM 6 C5' U B 23 22.076 -81.908 -79.356 1.00 67.50 C
ATOM 7 C4' U B 23 21.934 -82.039 -77.858 1.00 63.39 C
ATOM 8 O4' U B 23 20.774 -82.861 -77.548 1.00 64.44 O
ATOM 9 C3' U B 23 23.124 -82.675 -77.135 1.00 60.50 C
ATOM 10 O3' U B 23 23.400 -81.961 -75.936 1.00 59.12 O
ATOM 11 C2' U B 23 22.622 -84.070 -76.780 1.00 61.37 C
ATOM 12 O2' U B 23 23.211 -84.619 -75.622 1.00 61.12 O
ATOM 13 C1' U B 23 21.133 -83.827 -76.585 1.00 62.56 C
ATOM 14 N1 U B 23 20.304 -85.032 -76.785 1.00 72.06 N
ATOM 15 C2 U B 23 19.757 -85.597 -75.650 1.00 71.92 C
ATOM 16 O2 U B 23 19.913 -85.128 -74.538 1.00 69.28 O
ATOM 17 N3 U B 23 19.007 -86.722 -75.864 1.00 76.07 N
ATOM 18 C4 U B 23 18.764 -87.334 -77.078 1.00 80.77 C
ATOM 19 O4 U B 23 18.066 -88.352 -77.113 1.00 83.07 O
ATOM 20 C5 U B 23 19.378 -86.695 -78.205 1.00 82.31 C
ATOM 21 C6 U B 23 20.112 -85.593 -78.023 1.00 77.67 C
ATOM 22 P C B 24 24.806 -81.210 -75.771 1.00 76.15 P
ATOM 23 OP1 C B 24 25.024 -80.422 -77.015 1.00 79.55 O
ATOM 24 OP2 C B 24 24.773 -80.494 -74.467 1.00 73.28 O
ATOM 25 O5' C B 24 25.847 -82.417 -75.706 1.00 74.72 O
TER
Atoms:
C2: (30.674,-83.914,-81.632)
OP1: (30.894,-80.674,-74.375)
OP2: (28.853,-80.523,-75.920)
C4: (28.417,-83.414,-81.400)
O5': (30.893,-81.844,-76.611)
C3': (32.917,-81.729,-78.737)
C1': (32.215,-83.759,-79.712)
O4': (32.101,-83.872,-78.309)
C5': (32.170,-82.414,-76.379)
P: (30.012,-81.300,-75.399)
O2: (31.647,-84.266,-82.310)
C4': (32.843,-82.805,-77.670)
C2': (33.092,-82.543,-80.010)
O2': (34.435,-82.980,-80.145)
N1: (30.864,-83.624,-80.282)
N3: (29.439,-83.797,-82.166)
N4: (27.216,-83.314,-81.970)
C6: (29.812,-83.234,-79.503)
C5: (28.581,-83.116,-80.017)
O3': (33.957,-80.801,-78.512)
OP1: (30.894,-80.674,-74.375)
OP2: (28.853,-80.523,-75.920)
C4: (28.417,-83.414,-81.400)
O5': (30.893,-81.844,-76.611)
C3': (32.917,-81.729,-78.737)
C1': (32.215,-83.759,-79.712)
O4': (32.101,-83.872,-78.309)
C5': (32.170,-82.414,-76.379)
P: (30.012,-81.300,-75.399)
O2: (31.647,-84.266,-82.310)
C4': (32.843,-82.805,-77.670)
C2': (33.092,-82.543,-80.010)
O2': (34.435,-82.980,-80.145)
N1: (30.864,-83.624,-80.282)
N3: (29.439,-83.797,-82.166)
N4: (27.216,-83.314,-81.970)
C6: (29.812,-83.234,-79.503)
C5: (28.581,-83.116,-80.017)
O3': (33.957,-80.801,-78.512)
C4: (18.764,-87.334,-77.078)
N3: (19.007,-86.722,-75.864)
OP1: (23.673,-84.363,-81.844)
OP2: (24.368,-81.940,-81.440)
C2: (19.757,-85.597,-75.650)
C1': (21.133,-83.827,-76.585)
C3': (23.124,-82.675,-77.135)
O5': (22.684,-83.055,-79.936)
O4': (20.774,-82.861,-77.548)
C5': (22.076,-81.908,-79.356)
P: (23.326,-82.994,-81.393)
C4': (21.934,-82.039,-77.858)
C2': (22.622,-84.070,-76.780)
O2': (23.211,-84.619,-75.622)
N1: (20.304,-85.032,-76.785)
O4: (18.066,-88.352,-77.113)
O2: (19.913,-85.128,-74.538)
C6: (20.112,-85.593,-78.023)
C5: (19.378,-86.695,-78.205)
O3': (23.400,-81.961,-75.936)
N3: (19.007,-86.722,-75.864)
OP1: (23.673,-84.363,-81.844)
OP2: (24.368,-81.940,-81.440)
C2: (19.757,-85.597,-75.650)
C1': (21.133,-83.827,-76.585)
C3': (23.124,-82.675,-77.135)
O5': (22.684,-83.055,-79.936)
O4': (20.774,-82.861,-77.548)
C5': (22.076,-81.908,-79.356)
P: (23.326,-82.994,-81.393)
C4': (21.934,-82.039,-77.858)
C2': (22.622,-84.070,-76.780)
O2': (23.211,-84.619,-75.622)
N1: (20.304,-85.032,-76.785)
O4: (18.066,-88.352,-77.113)
O2: (19.913,-85.128,-74.538)
C6: (20.112,-85.593,-78.023)
C5: (19.378,-86.695,-78.205)
O3': (23.400,-81.961,-75.936)
Image (generated by PyMOL):