Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:X42:X41
Extra
PDB:
ATOM 1 O3' U A 41 22.218 -57.246 -70.674 1.00 88.03 O
ATOM 2 P C A 42 21.276 -56.700 -69.492 1.00 85.17 P
ATOM 3 OP1 C A 42 20.093 -56.068 -70.135 1.00 84.07 O
ATOM 4 OP2 C A 42 21.053 -57.833 -68.545 1.00 74.76 O
ATOM 5 O5' C A 42 22.181 -55.583 -68.806 1.00 89.62 O
ATOM 6 C5' C A 42 22.675 -54.484 -69.556 1.00 94.13 C
ATOM 7 C4' C A 42 22.136 -53.168 -69.041 1.00100.78 C
ATOM 8 O4' C A 42 22.024 -52.232 -70.144 1.00108.49 O
ATOM 9 C3' C A 42 20.740 -53.213 -68.423 1.00 99.35 C
ATOM 10 O3' C A 42 20.766 -53.535 -67.039 1.00 95.98 O
ATOM 11 C2' C A 42 20.185 -51.825 -68.711 1.00109.63 C
ATOM 12 O2' C A 42 20.664 -50.887 -67.761 1.00115.69 O
ATOM 13 C1' C A 42 20.823 -51.510 -70.059 1.00107.96 C
ATOM 14 N1 C A 42 19.970 -51.915 -71.193 1.00 93.08 N
ATOM 15 C2 C A 42 18.947 -51.087 -71.657 1.00 88.90 C
ATOM 16 O2 C A 42 18.726 -50.006 -71.089 1.00 93.12 O
ATOM 17 N3 C A 42 18.209 -51.495 -72.713 1.00 78.89 N
ATOM 18 C4 C A 42 18.466 -52.661 -73.304 1.00 73.81 C
ATOM 19 N4 C A 42 17.710 -53.021 -74.341 1.00 64.12 N
ATOM 20 C5 C A 42 19.508 -53.516 -72.861 1.00 77.41 C
ATOM 21 C6 C A 42 20.229 -53.100 -71.818 1.00 85.47 C
ATOM 22 P C A 43 19.410 -53.915 -66.258 1.00 77.29 P
ATOM 23 OP1 C A 43 19.741 -53.974 -64.812 1.00 80.44 O
ATOM 24 OP2 C A 43 18.853 -55.127 -66.913 1.00 70.53 O
ATOM 25 O5' C A 43 18.470 -52.663 -66.543 1.00 86.08 O
TER
ATOM 1 O3' G B 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 2 P U B 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 3 OP1 U B 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 4 OP2 U B 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 5 O5' U B 41 20.221 -57.252 -74.475 1.00 71.94 O
ATOM 6 C5' U B 41 19.799 -58.006 -73.346 1.00 68.96 C
ATOM 7 C4' U B 41 20.948 -58.316 -72.426 1.00 72.45 C
ATOM 8 O4' U B 41 21.838 -59.259 -73.081 1.00 66.54 O
ATOM 9 C3' U B 41 21.798 -57.113 -72.029 1.00 82.52 C
ATOM 10 O3' U B 41 22.218 -57.246 -70.674 1.00 88.03 O
ATOM 11 C2' U B 41 23.001 -57.210 -72.954 1.00 82.50 C
ATOM 12 O2' U B 41 24.181 -56.636 -72.433 1.00 86.41 O
ATOM 13 C1' U B 41 23.143 -58.723 -73.162 1.00 71.85 C
ATOM 14 N1 U B 41 23.699 -59.077 -74.486 1.00 67.81 N
ATOM 15 C2 U B 41 24.851 -59.829 -74.591 1.00 65.59 C
ATOM 16 O2 U B 41 25.443 -60.270 -73.622 1.00 64.61 O
ATOM 17 N3 U B 41 25.289 -60.058 -75.876 1.00 63.58 N
ATOM 18 C4 U B 41 24.708 -59.613 -77.046 1.00 62.33 C
ATOM 19 O4 U B 41 25.209 -59.894 -78.135 1.00 60.33 O
ATOM 20 C5 U B 41 23.527 -58.837 -76.853 1.00 64.07 C
ATOM 21 C6 U B 41 23.084 -58.598 -75.616 1.00 67.03 C
ATOM 22 P C B 42 21.276 -56.700 -69.492 1.00 85.17 P
ATOM 23 OP1 C B 42 20.093 -56.068 -70.135 1.00 84.07 O
ATOM 24 OP2 C B 42 21.053 -57.833 -68.545 1.00 74.76 O
ATOM 25 O5' C B 42 22.181 -55.583 -68.806 1.00 89.62 O
TER
ATOM 2 P C A 42 21.276 -56.700 -69.492 1.00 85.17 P
ATOM 3 OP1 C A 42 20.093 -56.068 -70.135 1.00 84.07 O
ATOM 4 OP2 C A 42 21.053 -57.833 -68.545 1.00 74.76 O
ATOM 5 O5' C A 42 22.181 -55.583 -68.806 1.00 89.62 O
ATOM 6 C5' C A 42 22.675 -54.484 -69.556 1.00 94.13 C
ATOM 7 C4' C A 42 22.136 -53.168 -69.041 1.00100.78 C
ATOM 8 O4' C A 42 22.024 -52.232 -70.144 1.00108.49 O
ATOM 9 C3' C A 42 20.740 -53.213 -68.423 1.00 99.35 C
ATOM 10 O3' C A 42 20.766 -53.535 -67.039 1.00 95.98 O
ATOM 11 C2' C A 42 20.185 -51.825 -68.711 1.00109.63 C
ATOM 12 O2' C A 42 20.664 -50.887 -67.761 1.00115.69 O
ATOM 13 C1' C A 42 20.823 -51.510 -70.059 1.00107.96 C
ATOM 14 N1 C A 42 19.970 -51.915 -71.193 1.00 93.08 N
ATOM 15 C2 C A 42 18.947 -51.087 -71.657 1.00 88.90 C
ATOM 16 O2 C A 42 18.726 -50.006 -71.089 1.00 93.12 O
ATOM 17 N3 C A 42 18.209 -51.495 -72.713 1.00 78.89 N
ATOM 18 C4 C A 42 18.466 -52.661 -73.304 1.00 73.81 C
ATOM 19 N4 C A 42 17.710 -53.021 -74.341 1.00 64.12 N
ATOM 20 C5 C A 42 19.508 -53.516 -72.861 1.00 77.41 C
ATOM 21 C6 C A 42 20.229 -53.100 -71.818 1.00 85.47 C
ATOM 22 P C A 43 19.410 -53.915 -66.258 1.00 77.29 P
ATOM 23 OP1 C A 43 19.741 -53.974 -64.812 1.00 80.44 O
ATOM 24 OP2 C A 43 18.853 -55.127 -66.913 1.00 70.53 O
ATOM 25 O5' C A 43 18.470 -52.663 -66.543 1.00 86.08 O
TER
ATOM 1 O3' G B 40 18.350 -58.071 -75.914 1.00 78.22 O
ATOM 2 P U B 41 19.165 -56.737 -75.549 1.00 67.28 P
ATOM 3 OP1 U B 41 18.209 -55.807 -74.906 1.00 67.86 O
ATOM 4 OP2 U B 41 19.871 -56.298 -76.780 1.00 61.92 O
ATOM 5 O5' U B 41 20.221 -57.252 -74.475 1.00 71.94 O
ATOM 6 C5' U B 41 19.799 -58.006 -73.346 1.00 68.96 C
ATOM 7 C4' U B 41 20.948 -58.316 -72.426 1.00 72.45 C
ATOM 8 O4' U B 41 21.838 -59.259 -73.081 1.00 66.54 O
ATOM 9 C3' U B 41 21.798 -57.113 -72.029 1.00 82.52 C
ATOM 10 O3' U B 41 22.218 -57.246 -70.674 1.00 88.03 O
ATOM 11 C2' U B 41 23.001 -57.210 -72.954 1.00 82.50 C
ATOM 12 O2' U B 41 24.181 -56.636 -72.433 1.00 86.41 O
ATOM 13 C1' U B 41 23.143 -58.723 -73.162 1.00 71.85 C
ATOM 14 N1 U B 41 23.699 -59.077 -74.486 1.00 67.81 N
ATOM 15 C2 U B 41 24.851 -59.829 -74.591 1.00 65.59 C
ATOM 16 O2 U B 41 25.443 -60.270 -73.622 1.00 64.61 O
ATOM 17 N3 U B 41 25.289 -60.058 -75.876 1.00 63.58 N
ATOM 18 C4 U B 41 24.708 -59.613 -77.046 1.00 62.33 C
ATOM 19 O4 U B 41 25.209 -59.894 -78.135 1.00 60.33 O
ATOM 20 C5 U B 41 23.527 -58.837 -76.853 1.00 64.07 C
ATOM 21 C6 U B 41 23.084 -58.598 -75.616 1.00 67.03 C
ATOM 22 P C B 42 21.276 -56.700 -69.492 1.00 85.17 P
ATOM 23 OP1 C B 42 20.093 -56.068 -70.135 1.00 84.07 O
ATOM 24 OP2 C B 42 21.053 -57.833 -68.545 1.00 74.76 O
ATOM 25 O5' C B 42 22.181 -55.583 -68.806 1.00 89.62 O
TER
Atoms:
C2: (18.947,-51.087,-71.657)
OP1: (20.093,-56.068,-70.135)
OP2: (21.053,-57.833,-68.545)
C4: (18.466,-52.661,-73.304)
O5': (22.181,-55.583,-68.806)
C3': (20.740,-53.213,-68.423)
C1': (20.823,-51.510,-70.059)
O4': (22.024,-52.232,-70.144)
C5': (22.675,-54.484,-69.556)
P: (21.276,-56.700,-69.492)
O2: (18.726,-50.006,-71.089)
C4': (22.136,-53.168,-69.041)
C2': (20.185,-51.825,-68.711)
O2': (20.664,-50.887,-67.761)
N1: (19.970,-51.915,-71.193)
N3: (18.209,-51.495,-72.713)
N4: (17.710,-53.021,-74.341)
C6: (20.229,-53.100,-71.818)
C5: (19.508,-53.516,-72.861)
O3': (20.766,-53.535,-67.039)
OP1: (20.093,-56.068,-70.135)
OP2: (21.053,-57.833,-68.545)
C4: (18.466,-52.661,-73.304)
O5': (22.181,-55.583,-68.806)
C3': (20.740,-53.213,-68.423)
C1': (20.823,-51.510,-70.059)
O4': (22.024,-52.232,-70.144)
C5': (22.675,-54.484,-69.556)
P: (21.276,-56.700,-69.492)
O2: (18.726,-50.006,-71.089)
C4': (22.136,-53.168,-69.041)
C2': (20.185,-51.825,-68.711)
O2': (20.664,-50.887,-67.761)
N1: (19.970,-51.915,-71.193)
N3: (18.209,-51.495,-72.713)
N4: (17.710,-53.021,-74.341)
C6: (20.229,-53.100,-71.818)
C5: (19.508,-53.516,-72.861)
O3': (20.766,-53.535,-67.039)
C4: (24.708,-59.613,-77.046)
N3: (25.289,-60.058,-75.876)
OP1: (18.209,-55.807,-74.906)
OP2: (19.871,-56.298,-76.780)
C2: (24.851,-59.829,-74.591)
C1': (23.143,-58.723,-73.162)
C3': (21.798,-57.113,-72.029)
O5': (20.221,-57.252,-74.475)
O4': (21.838,-59.259,-73.081)
C5': (19.799,-58.006,-73.346)
P: (19.165,-56.737,-75.549)
C4': (20.948,-58.316,-72.426)
C2': (23.001,-57.210,-72.954)
O2': (24.181,-56.636,-72.433)
N1: (23.699,-59.077,-74.486)
O4: (25.209,-59.894,-78.135)
O2: (25.443,-60.270,-73.622)
C6: (23.084,-58.598,-75.616)
C5: (23.527,-58.837,-76.853)
O3': (22.218,-57.246,-70.674)
N3: (25.289,-60.058,-75.876)
OP1: (18.209,-55.807,-74.906)
OP2: (19.871,-56.298,-76.780)
C2: (24.851,-59.829,-74.591)
C1': (23.143,-58.723,-73.162)
C3': (21.798,-57.113,-72.029)
O5': (20.221,-57.252,-74.475)
O4': (21.838,-59.259,-73.081)
C5': (19.799,-58.006,-73.346)
P: (19.165,-56.737,-75.549)
C4': (20.948,-58.316,-72.426)
C2': (23.001,-57.210,-72.954)
O2': (24.181,-56.636,-72.433)
N1: (23.699,-59.077,-74.486)
O4: (25.209,-59.894,-78.135)
O2: (25.443,-60.270,-73.622)
C6: (23.084,-58.598,-75.616)
C5: (23.527,-58.837,-76.853)
O3': (22.218,-57.246,-70.674)
Image (generated by PyMOL):