Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3B5S:C8:C6
Extra
PDB:
ATOM 1 P C A 8 25.640 10.577 45.147 1.00 63.34 P
ATOM 2 OP1 C A 8 25.747 9.171 45.632 1.00 64.89 O
ATOM 3 OP2 C A 8 25.734 10.857 43.681 1.00 62.72 O
ATOM 4 O5' C A 8 24.277 11.198 45.715 1.00 64.95 O
ATOM 5 C5' C A 8 23.738 12.464 45.291 1.00 65.84 C
ATOM 6 C4' C A 8 22.358 12.673 45.916 1.00 70.11 C
ATOM 7 O4' C A 8 21.575 11.457 45.761 1.00 72.95 O
ATOM 8 C3' C A 8 22.461 12.903 47.433 1.00 70.08 C
ATOM 9 O3' C A 8 21.415 13.738 47.929 1.00 66.69 O
ATOM 10 C2' C A 8 22.232 11.539 48.075 1.00 70.33 C
ATOM 11 O2' C A 8 21.531 11.605 49.300 1.00 73.19 O
ATOM 12 C1' C A 8 21.327 10.892 47.032 1.00 70.71 C
ATOM 13 N1 C A 8 21.305 9.437 46.983 1.00 75.50 N
ATOM 14 C2 C A 8 20.141 8.836 47.348 1.00 77.90 C
ATOM 15 O2 C A 8 19.142 9.541 47.545 1.00 77.55 O
ATOM 16 N3 C A 8 20.122 7.489 47.467 1.00 77.85 N
ATOM 17 C4 C A 8 21.206 6.756 47.202 1.00 77.87 C
ATOM 18 N4 C A 8 21.090 5.436 47.319 1.00 75.27 N
ATOM 19 C5 C A 8 22.419 7.359 46.784 1.00 76.62 C
ATOM 20 C6 C A 8 22.427 8.712 46.703 1.00 75.81 C
ATOM 21 P A A 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 22 OP1 A A 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 23 OP2 A A 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 24 O5' A A 9 22.719 15.680 48.809 1.00 65.16 O
TER
ATOM 1 O3' G B 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 2 P U B 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 3 OP1 U B 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 4 OP2 U B 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 5 O5' U B 6 25.053 5.977 48.609 1.00 69.04 O
ATOM 6 C5' U B 6 24.300 6.157 49.806 1.00 67.72 C
ATOM 7 C4' U B 6 25.106 6.923 50.842 1.00 68.13 C
ATOM 8 O4' U B 6 26.282 6.152 51.250 1.00 70.31 O
ATOM 9 C3' U B 6 25.662 8.215 50.218 1.00 65.88 C
ATOM 10 O3' U B 6 25.595 9.340 51.099 1.00 62.09 O
ATOM 11 C2' U B 6 27.108 7.901 49.832 1.00 68.97 C
ATOM 12 O2' U B 6 28.025 8.962 49.993 1.00 72.55 O
ATOM 13 C1' U B 6 27.453 6.850 50.877 1.00 68.94 C
ATOM 14 N1 U B 6 28.567 5.977 50.534 1.00 68.76 N
ATOM 15 C2 U B 6 29.787 6.285 51.153 1.00 69.50 C
ATOM 16 O2 U B 6 29.931 7.173 51.968 1.00 69.58 O
ATOM 17 N3 U B 6 30.828 5.471 50.776 1.00 70.50 N
ATOM 18 C4 U B 6 30.762 4.423 49.871 1.00 72.30 C
ATOM 19 O4 U B 6 31.763 3.755 49.626 1.00 72.90 O
ATOM 20 C5 U B 6 29.474 4.195 49.291 1.00 71.73 C
ATOM 21 C6 U B 6 28.447 4.975 49.633 1.00 69.86 C
TER
ATOM 2 OP1 C A 8 25.747 9.171 45.632 1.00 64.89 O
ATOM 3 OP2 C A 8 25.734 10.857 43.681 1.00 62.72 O
ATOM 4 O5' C A 8 24.277 11.198 45.715 1.00 64.95 O
ATOM 5 C5' C A 8 23.738 12.464 45.291 1.00 65.84 C
ATOM 6 C4' C A 8 22.358 12.673 45.916 1.00 70.11 C
ATOM 7 O4' C A 8 21.575 11.457 45.761 1.00 72.95 O
ATOM 8 C3' C A 8 22.461 12.903 47.433 1.00 70.08 C
ATOM 9 O3' C A 8 21.415 13.738 47.929 1.00 66.69 O
ATOM 10 C2' C A 8 22.232 11.539 48.075 1.00 70.33 C
ATOM 11 O2' C A 8 21.531 11.605 49.300 1.00 73.19 O
ATOM 12 C1' C A 8 21.327 10.892 47.032 1.00 70.71 C
ATOM 13 N1 C A 8 21.305 9.437 46.983 1.00 75.50 N
ATOM 14 C2 C A 8 20.141 8.836 47.348 1.00 77.90 C
ATOM 15 O2 C A 8 19.142 9.541 47.545 1.00 77.55 O
ATOM 16 N3 C A 8 20.122 7.489 47.467 1.00 77.85 N
ATOM 17 C4 C A 8 21.206 6.756 47.202 1.00 77.87 C
ATOM 18 N4 C A 8 21.090 5.436 47.319 1.00 75.27 N
ATOM 19 C5 C A 8 22.419 7.359 46.784 1.00 76.62 C
ATOM 20 C6 C A 8 22.427 8.712 46.703 1.00 75.81 C
ATOM 21 P A A 9 21.492 15.331 47.869 1.00 71.65 P
ATOM 22 OP1 A A 9 20.217 15.676 48.579 1.00 68.74 O
ATOM 23 OP2 A A 9 21.751 15.864 46.502 1.00 63.59 O
ATOM 24 O5' A A 9 22.719 15.680 48.809 1.00 65.16 O
TER
ATOM 1 O3' G B 5 26.491 4.562 47.069 1.00 65.05 O
ATOM 2 P U B 6 25.074 4.574 47.840 1.00 67.03 P
ATOM 3 OP1 U B 6 25.183 3.487 48.847 1.00 63.01 O
ATOM 4 OP2 U B 6 23.984 4.552 46.826 1.00 61.85 O
ATOM 5 O5' U B 6 25.053 5.977 48.609 1.00 69.04 O
ATOM 6 C5' U B 6 24.300 6.157 49.806 1.00 67.72 C
ATOM 7 C4' U B 6 25.106 6.923 50.842 1.00 68.13 C
ATOM 8 O4' U B 6 26.282 6.152 51.250 1.00 70.31 O
ATOM 9 C3' U B 6 25.662 8.215 50.218 1.00 65.88 C
ATOM 10 O3' U B 6 25.595 9.340 51.099 1.00 62.09 O
ATOM 11 C2' U B 6 27.108 7.901 49.832 1.00 68.97 C
ATOM 12 O2' U B 6 28.025 8.962 49.993 1.00 72.55 O
ATOM 13 C1' U B 6 27.453 6.850 50.877 1.00 68.94 C
ATOM 14 N1 U B 6 28.567 5.977 50.534 1.00 68.76 N
ATOM 15 C2 U B 6 29.787 6.285 51.153 1.00 69.50 C
ATOM 16 O2 U B 6 29.931 7.173 51.968 1.00 69.58 O
ATOM 17 N3 U B 6 30.828 5.471 50.776 1.00 70.50 N
ATOM 18 C4 U B 6 30.762 4.423 49.871 1.00 72.30 C
ATOM 19 O4 U B 6 31.763 3.755 49.626 1.00 72.90 O
ATOM 20 C5 U B 6 29.474 4.195 49.291 1.00 71.73 C
ATOM 21 C6 U B 6 28.447 4.975 49.633 1.00 69.86 C
TER
Atoms:
C2: (20.141,8.836,47.348)
OP1: (25.747,9.171,45.632)
OP2: (25.734,10.857,43.681)
C4: (21.206,6.756,47.202)
O5': (24.277,11.198,45.715)
C3': (22.461,12.903,47.433)
C1': (21.327,10.892,47.032)
O4': (21.575,11.457,45.761)
C5': (23.738,12.464,45.291)
P: (25.640,10.577,45.147)
O2: (19.142,9.541,47.545)
C4': (22.358,12.673,45.916)
C2': (22.232,11.539,48.075)
O2': (21.531,11.605,49.300)
N1: (21.305,9.437,46.983)
N3: (20.122,7.489,47.467)
N4: (21.090,5.436,47.319)
C6: (22.427,8.712,46.703)
C5: (22.419,7.359,46.784)
O3': (21.415,13.738,47.929)
OP1: (25.747,9.171,45.632)
OP2: (25.734,10.857,43.681)
C4: (21.206,6.756,47.202)
O5': (24.277,11.198,45.715)
C3': (22.461,12.903,47.433)
C1': (21.327,10.892,47.032)
O4': (21.575,11.457,45.761)
C5': (23.738,12.464,45.291)
P: (25.640,10.577,45.147)
O2: (19.142,9.541,47.545)
C4': (22.358,12.673,45.916)
C2': (22.232,11.539,48.075)
O2': (21.531,11.605,49.300)
N1: (21.305,9.437,46.983)
N3: (20.122,7.489,47.467)
N4: (21.090,5.436,47.319)
C6: (22.427,8.712,46.703)
C5: (22.419,7.359,46.784)
O3': (21.415,13.738,47.929)
C4: (30.762,4.423,49.871)
N3: (30.828,5.471,50.776)
OP1: (25.183,3.487,48.847)
OP2: (23.984,4.552,46.826)
C2: (29.787,6.285,51.153)
C1': (27.453,6.850,50.877)
C3': (25.662,8.215,50.218)
O5': (25.053,5.977,48.609)
O4': (26.282,6.152,51.250)
C5': (24.300,6.157,49.806)
P: (25.074,4.574,47.840)
C4': (25.106,6.923,50.842)
C2': (27.108,7.901,49.832)
O2': (28.025,8.962,49.993)
N1: (28.567,5.977,50.534)
O4: (31.763,3.755,49.626)
O2: (29.931,7.173,51.968)
C6: (28.447,4.975,49.633)
C5: (29.474,4.195,49.291)
O3': (25.595,9.340,51.099)
N3: (30.828,5.471,50.776)
OP1: (25.183,3.487,48.847)
OP2: (23.984,4.552,46.826)
C2: (29.787,6.285,51.153)
C1': (27.453,6.850,50.877)
C3': (25.662,8.215,50.218)
O5': (25.053,5.977,48.609)
O4': (26.282,6.152,51.250)
C5': (24.300,6.157,49.806)
P: (25.074,4.574,47.840)
C4': (25.106,6.923,50.842)
C2': (27.108,7.901,49.832)
O2': (28.025,8.962,49.993)
N1: (28.567,5.977,50.534)
O4: (31.763,3.755,49.626)
O2: (29.931,7.173,51.968)
C6: (28.447,4.975,49.633)
C5: (29.474,4.195,49.291)
O3': (25.595,9.340,51.099)
Image (generated by PyMOL):