Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A1959:A1934
Extra
PDB:
ATOM 1 O3' G A1958 -39.573 113.756 130.677 1.00 32.30 O
ATOM 2 P C A1959 -40.034 113.519 132.201 1.00 31.59 P
ATOM 3 OP1 C A1959 -38.919 114.015 133.057 1.00 40.14 O
ATOM 4 OP2 C A1959 -40.590 112.155 132.383 1.00 25.78 O
ATOM 5 O5' C A1959 -41.219 114.574 132.402 1.00 36.63 O
ATOM 6 C5' C A1959 -42.553 114.213 132.137 1.00 39.83 C
ATOM 7 C4' C A1959 -43.446 114.872 133.163 1.00 35.08 C
ATOM 8 O4' C A1959 -43.051 114.457 134.493 1.00 26.43 O
ATOM 9 C3' C A1959 -43.275 116.369 133.192 1.00 37.12 C
ATOM 10 O3' C A1959 -44.081 116.984 132.211 1.00 35.75 O
ATOM 11 C2' C A1959 -43.752 116.712 134.593 1.00 37.24 C
ATOM 12 O2' C A1959 -45.128 116.997 134.597 1.00 32.80 O
ATOM 13 C1' C A1959 -43.422 115.457 135.404 1.00 30.91 C
ATOM 14 N1 C A1959 -42.266 115.689 136.279 1.00 33.13 N
ATOM 15 C2 C A1959 -42.486 115.938 137.635 1.00 36.03 C
ATOM 16 O2 C A1959 -43.646 115.940 138.060 1.00 43.00 O
ATOM 17 N3 C A1959 -41.425 116.164 138.442 1.00 43.05 N
ATOM 18 C4 C A1959 -40.197 116.158 137.922 1.00 46.23 C
ATOM 19 N4 C A1959 -39.179 116.384 138.759 1.00 54.18 N
ATOM 20 C5 C A1959 -39.955 115.913 136.534 1.00 43.57 C
ATOM 21 C6 C A1959 -41.010 115.685 135.751 1.00 41.37 C
ATOM 22 P A A1960 -43.526 118.359 131.612 1.00 34.47 P
ATOM 23 OP1 A A1960 -43.542 119.378 132.699 1.00 42.74 O
ATOM 24 OP2 A A1960 -44.142 118.612 130.293 1.00 52.32 O
ATOM 25 O5' A A1960 -42.020 117.982 131.291 1.00 59.13 O
TER
ATOM 1 O3' U B1933 -34.227 115.919 136.281 1.00 32.19 O
ATOM 2 P U B1934 -35.038 115.338 137.548 1.00 43.01 P
ATOM 3 OP1 U B1934 -36.396 115.928 137.445 1.00 47.70 O
ATOM 4 OP2 U B1934 -34.248 115.522 138.798 1.00 44.77 O
ATOM 5 O5' U B1934 -35.093 113.755 137.253 1.00 46.82 O
ATOM 6 C5' U B1934 -35.915 113.243 136.200 1.00 50.89 C
ATOM 7 C4' U B1934 -37.096 112.492 136.771 1.00 37.63 C
ATOM 8 O4' U B1934 -37.939 112.012 135.695 1.00 52.80 O
ATOM 9 C3' U B1934 -36.683 111.258 137.523 1.00 31.37 C
ATOM 10 O3' U B1934 -37.679 111.007 138.484 1.00 37.63 O
ATOM 11 C2' U B1934 -36.617 110.234 136.384 1.00 40.65 C
ATOM 12 O2' U B1934 -36.704 108.892 136.830 1.00 48.63 O
ATOM 13 C1' U B1934 -37.822 110.614 135.530 1.00 47.16 C
ATOM 14 N1 U B1934 -37.703 110.304 134.053 1.00 36.05 N
ATOM 15 C2 U B1934 -38.650 109.525 133.395 1.00 43.42 C
ATOM 16 O2 U B1934 -39.617 109.036 133.943 1.00 57.25 O
ATOM 17 N3 U B1934 -38.442 109.314 132.053 1.00 43.50 N
ATOM 18 C4 U B1934 -37.388 109.802 131.299 1.00 47.92 C
ATOM 19 O4 U B1934 -37.290 109.544 130.093 1.00 43.06 O
ATOM 20 C5 U B1934 -36.456 110.605 132.052 1.00 44.83 C
ATOM 21 C6 U B1934 -36.637 110.821 133.361 1.00 30.55 C
ATOM 22 P C B1935 -37.267 110.983 140.039 1.00 35.66 P
ATOM 23 OP1 C B1935 -36.284 112.074 140.195 1.00 59.28 O
ATOM 24 OP2 C B1935 -36.946 109.589 140.476 1.00 30.50 O
ATOM 25 O5' C B1935 -38.597 111.397 140.827 1.00 36.06 O
TER
ATOM 2 P C A1959 -40.034 113.519 132.201 1.00 31.59 P
ATOM 3 OP1 C A1959 -38.919 114.015 133.057 1.00 40.14 O
ATOM 4 OP2 C A1959 -40.590 112.155 132.383 1.00 25.78 O
ATOM 5 O5' C A1959 -41.219 114.574 132.402 1.00 36.63 O
ATOM 6 C5' C A1959 -42.553 114.213 132.137 1.00 39.83 C
ATOM 7 C4' C A1959 -43.446 114.872 133.163 1.00 35.08 C
ATOM 8 O4' C A1959 -43.051 114.457 134.493 1.00 26.43 O
ATOM 9 C3' C A1959 -43.275 116.369 133.192 1.00 37.12 C
ATOM 10 O3' C A1959 -44.081 116.984 132.211 1.00 35.75 O
ATOM 11 C2' C A1959 -43.752 116.712 134.593 1.00 37.24 C
ATOM 12 O2' C A1959 -45.128 116.997 134.597 1.00 32.80 O
ATOM 13 C1' C A1959 -43.422 115.457 135.404 1.00 30.91 C
ATOM 14 N1 C A1959 -42.266 115.689 136.279 1.00 33.13 N
ATOM 15 C2 C A1959 -42.486 115.938 137.635 1.00 36.03 C
ATOM 16 O2 C A1959 -43.646 115.940 138.060 1.00 43.00 O
ATOM 17 N3 C A1959 -41.425 116.164 138.442 1.00 43.05 N
ATOM 18 C4 C A1959 -40.197 116.158 137.922 1.00 46.23 C
ATOM 19 N4 C A1959 -39.179 116.384 138.759 1.00 54.18 N
ATOM 20 C5 C A1959 -39.955 115.913 136.534 1.00 43.57 C
ATOM 21 C6 C A1959 -41.010 115.685 135.751 1.00 41.37 C
ATOM 22 P A A1960 -43.526 118.359 131.612 1.00 34.47 P
ATOM 23 OP1 A A1960 -43.542 119.378 132.699 1.00 42.74 O
ATOM 24 OP2 A A1960 -44.142 118.612 130.293 1.00 52.32 O
ATOM 25 O5' A A1960 -42.020 117.982 131.291 1.00 59.13 O
TER
ATOM 1 O3' U B1933 -34.227 115.919 136.281 1.00 32.19 O
ATOM 2 P U B1934 -35.038 115.338 137.548 1.00 43.01 P
ATOM 3 OP1 U B1934 -36.396 115.928 137.445 1.00 47.70 O
ATOM 4 OP2 U B1934 -34.248 115.522 138.798 1.00 44.77 O
ATOM 5 O5' U B1934 -35.093 113.755 137.253 1.00 46.82 O
ATOM 6 C5' U B1934 -35.915 113.243 136.200 1.00 50.89 C
ATOM 7 C4' U B1934 -37.096 112.492 136.771 1.00 37.63 C
ATOM 8 O4' U B1934 -37.939 112.012 135.695 1.00 52.80 O
ATOM 9 C3' U B1934 -36.683 111.258 137.523 1.00 31.37 C
ATOM 10 O3' U B1934 -37.679 111.007 138.484 1.00 37.63 O
ATOM 11 C2' U B1934 -36.617 110.234 136.384 1.00 40.65 C
ATOM 12 O2' U B1934 -36.704 108.892 136.830 1.00 48.63 O
ATOM 13 C1' U B1934 -37.822 110.614 135.530 1.00 47.16 C
ATOM 14 N1 U B1934 -37.703 110.304 134.053 1.00 36.05 N
ATOM 15 C2 U B1934 -38.650 109.525 133.395 1.00 43.42 C
ATOM 16 O2 U B1934 -39.617 109.036 133.943 1.00 57.25 O
ATOM 17 N3 U B1934 -38.442 109.314 132.053 1.00 43.50 N
ATOM 18 C4 U B1934 -37.388 109.802 131.299 1.00 47.92 C
ATOM 19 O4 U B1934 -37.290 109.544 130.093 1.00 43.06 O
ATOM 20 C5 U B1934 -36.456 110.605 132.052 1.00 44.83 C
ATOM 21 C6 U B1934 -36.637 110.821 133.361 1.00 30.55 C
ATOM 22 P C B1935 -37.267 110.983 140.039 1.00 35.66 P
ATOM 23 OP1 C B1935 -36.284 112.074 140.195 1.00 59.28 O
ATOM 24 OP2 C B1935 -36.946 109.589 140.476 1.00 30.50 O
ATOM 25 O5' C B1935 -38.597 111.397 140.827 1.00 36.06 O
TER
Atoms:
C2: (-42.486,115.938,137.635)
OP1: (-38.919,114.015,133.057)
OP2: (-40.590,112.155,132.383)
C4: (-40.197,116.158,137.922)
O5': (-41.219,114.574,132.402)
C3': (-43.275,116.369,133.192)
C1': (-43.422,115.457,135.404)
O4': (-43.051,114.457,134.493)
C5': (-42.553,114.213,132.137)
P: (-40.034,113.519,132.201)
O2: (-43.646,115.940,138.060)
C4': (-43.446,114.872,133.163)
C2': (-43.752,116.712,134.593)
O2': (-45.128,116.997,134.597)
N1: (-42.266,115.689,136.279)
N3: (-41.425,116.164,138.442)
N4: (-39.179,116.384,138.759)
C6: (-41.010,115.685,135.751)
C5: (-39.955,115.913,136.534)
O3': (-44.081,116.984,132.211)
OP1: (-38.919,114.015,133.057)
OP2: (-40.590,112.155,132.383)
C4: (-40.197,116.158,137.922)
O5': (-41.219,114.574,132.402)
C3': (-43.275,116.369,133.192)
C1': (-43.422,115.457,135.404)
O4': (-43.051,114.457,134.493)
C5': (-42.553,114.213,132.137)
P: (-40.034,113.519,132.201)
O2: (-43.646,115.940,138.060)
C4': (-43.446,114.872,133.163)
C2': (-43.752,116.712,134.593)
O2': (-45.128,116.997,134.597)
N1: (-42.266,115.689,136.279)
N3: (-41.425,116.164,138.442)
N4: (-39.179,116.384,138.759)
C6: (-41.010,115.685,135.751)
C5: (-39.955,115.913,136.534)
O3': (-44.081,116.984,132.211)
C4: (-37.388,109.802,131.299)
N3: (-38.442,109.314,132.053)
OP1: (-36.396,115.928,137.445)
OP2: (-34.248,115.522,138.798)
C2: (-38.650,109.525,133.395)
C1': (-37.822,110.614,135.530)
C3': (-36.683,111.258,137.523)
O5': (-35.093,113.755,137.253)
O4': (-37.939,112.012,135.695)
C5': (-35.915,113.243,136.200)
P: (-35.038,115.338,137.548)
C4': (-37.096,112.492,136.771)
C2': (-36.617,110.234,136.384)
O2': (-36.704,108.892,136.830)
N1: (-37.703,110.304,134.053)
O4: (-37.290,109.544,130.093)
O2: (-39.617,109.036,133.943)
C6: (-36.637,110.821,133.361)
C5: (-36.456,110.605,132.052)
O3': (-37.679,111.007,138.484)
N3: (-38.442,109.314,132.053)
OP1: (-36.396,115.928,137.445)
OP2: (-34.248,115.522,138.798)
C2: (-38.650,109.525,133.395)
C1': (-37.822,110.614,135.530)
C3': (-36.683,111.258,137.523)
O5': (-35.093,113.755,137.253)
O4': (-37.939,112.012,135.695)
C5': (-35.915,113.243,136.200)
P: (-35.038,115.338,137.548)
C4': (-37.096,112.492,136.771)
C2': (-36.617,110.234,136.384)
O2': (-36.704,108.892,136.830)
N1: (-37.703,110.304,134.053)
O4: (-37.290,109.544,130.093)
O2: (-39.617,109.036,133.943)
C6: (-36.637,110.821,133.361)
C5: (-36.456,110.605,132.052)
O3': (-37.679,111.007,138.484)
Image (generated by PyMOL):