ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F4H:Y19:Y18

Extra

PDB:
ATOM 1 O3' U A 18 17.861 55.791 11.566 1.00100.90 O
ATOM 2 P C A 19 18.656 56.211 10.239 1.00102.55 P
ATOM 3 OP1 C A 19 18.938 54.964 9.492 1.00102.57 O
ATOM 4 OP2 C A 19 19.779 57.114 10.589 1.00101.54 O
ATOM 5 O5' C A 19 17.554 57.087 9.462 1.00102.52 O
ATOM 6 C5' C A 19 16.804 56.556 8.369 1.00102.05 C
ATOM 7 C4' C A 19 16.259 57.680 7.498 1.00102.45 C
ATOM 8 O4' C A 19 15.330 58.506 8.253 1.00102.98 O
ATOM 9 C3' C A 19 17.294 58.648 6.933 1.00101.58 C
ATOM 10 O3' C A 19 17.763 58.165 5.680 1.00 99.67 O
ATOM 11 C2' C A 19 16.479 59.928 6.761 1.00102.51 C
ATOM 12 O2' C A 19 15.720 59.955 5.566 1.00102.88 O
ATOM 13 C1' C A 19 15.522 59.878 7.950 1.00103.03 C
ATOM 14 N1 C A 19 15.988 60.626 9.179 1.00103.32 N
ATOM 15 C2 C A 19 16.313 61.998 9.116 1.00102.92 C
ATOM 16 O2 C A 19 16.224 62.612 8.046 1.00101.77 O
ATOM 17 N3 C A 19 16.732 62.623 10.250 1.00103.60 N
ATOM 18 C4 C A 19 16.822 61.950 11.405 1.00104.02 C
ATOM 19 N4 C A 19 17.232 62.612 12.491 1.00103.84 N
ATOM 20 C5 C A 19 16.490 60.565 11.496 1.00104.26 C
ATOM 21 C6 C A 19 16.085 59.955 10.372 1.00104.08 C
ATOM 22 P C A 20 19.314 58.161 5.319 1.00 98.89 P
ATOM 23 OP1 C A 20 19.473 57.442 4.037 1.00 98.67 O
ATOM 24 OP2 C A 20 20.070 57.712 6.514 1.00 99.68 O
ATOM 25 O5' C A 20 19.631 59.713 5.102 1.00 99.50 O
TER

ATOM 1 O3' U B 17 19.248 59.542 16.845 1.00100.43 O
ATOM 2 P U B 18 18.759 59.697 15.322 1.00 99.83 P
ATOM 3 OP1 U B 18 19.946 59.814 14.446 1.00 99.08 O
ATOM 4 OP2 U B 18 17.707 60.739 15.289 1.00 99.75 O
ATOM 5 O5' U B 18 18.066 58.296 15.018 1.00 99.41 O
ATOM 6 C5' U B 18 18.873 57.193 14.704 1.00 98.03 C
ATOM 7 C4' U B 18 18.064 56.202 13.905 1.00 98.49 C
ATOM 8 O4' U B 18 16.906 55.795 14.677 1.00 98.63 O
ATOM 9 C3' U B 18 17.541 56.733 12.576 1.00 98.98 C
ATOM 10 O3' U B 18 17.861 55.791 11.566 1.00100.90 O
ATOM 11 C2' U B 18 16.036 56.819 12.811 1.00 99.20 C
ATOM 12 O2' U B 18 15.258 56.579 11.658 1.00 99.56 O
ATOM 13 C1' U B 18 15.823 55.684 13.796 1.00 98.72 C
ATOM 14 N1 U B 18 14.541 55.820 14.523 1.00 98.78 N
ATOM 15 C2 U B 18 13.556 54.875 14.318 1.00 99.45 C
ATOM 16 O2 U B 18 13.688 53.908 13.594 1.00100.74 O
ATOM 17 N3 U B 18 12.397 55.090 15.011 1.00 98.45 N
ATOM 18 C4 U B 18 12.127 56.137 15.865 1.00 98.24 C
ATOM 19 O4 U B 18 11.035 56.188 16.414 1.00 99.37 O
ATOM 20 C5 U B 18 13.190 57.090 16.027 1.00 98.07 C
ATOM 21 C6 U B 18 14.334 56.900 15.357 1.00 98.56 C
ATOM 22 P C B 19 18.656 56.211 10.239 1.00102.55 P
ATOM 23 OP1 C B 19 18.938 54.964 9.492 1.00102.57 O
ATOM 24 OP2 C B 19 19.779 57.114 10.589 1.00101.54 O
ATOM 25 O5' C B 19 17.554 57.087 9.462 1.00102.52 O
TER

Atoms:
C2: (16.313,61.998,9.116)
OP1: (18.938,54.964,9.492)
OP2: (19.779,57.114,10.589)
C4: (16.822,61.950,11.405)
O5': (17.554,57.087,9.462)
C3': (17.294,58.648,6.933)
C1': (15.522,59.878,7.950)
O4': (15.330,58.506,8.253)
C5': (16.804,56.556,8.369)
P: (18.656,56.211,10.239)
O2: (16.224,62.612,8.046)
C4': (16.259,57.680,7.498)
C2': (16.479,59.928,6.761)
O2': (15.720,59.955,5.566)
N1: (15.988,60.626,9.179)
N3: (16.732,62.623,10.250)
N4: (17.232,62.612,12.491)
C6: (16.085,59.955,10.372)
C5: (16.490,60.565,11.496)
O3': (17.763,58.165,5.680)
C4: (12.127,56.137,15.865)
N3: (12.397,55.090,15.011)
OP1: (19.946,59.814,14.446)
OP2: (17.707,60.739,15.289)
C2: (13.556,54.875,14.318)
C1': (15.823,55.684,13.796)
C3': (17.541,56.733,12.576)
O5': (18.066,58.296,15.018)
O4': (16.906,55.795,14.677)
C5': (18.873,57.193,14.704)
P: (18.759,59.697,15.322)
C4': (18.064,56.202,13.905)
C2': (16.036,56.819,12.811)
O2': (15.258,56.579,11.658)
N1: (14.541,55.820,14.523)
O4: (11.035,56.188,16.414)
O2: (13.688,53.908,13.594)
C6: (14.334,56.900,15.357)
C5: (13.190,57.090,16.027)
O3': (17.861,55.791,11.566)
Image (generated by PyMOL):
PyMOL image
show in jmol