Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GS8:D8:D6
Extra
PDB:
ATOM 1 O3' A A 7 27.350 10.705 46.508 1.00 91.15 O
ATOM 2 P C A 8 25.965 10.049 46.030 1.00 97.10 P
ATOM 3 OP1 C A 8 25.934 8.655 46.537 1.00101.54 O
ATOM 4 OP2 C A 8 25.889 10.304 44.560 1.00 93.21 O
ATOM 5 O5' C A 8 24.812 10.886 46.755 1.00 95.72 O
ATOM 6 C5' C A 8 24.019 11.833 46.027 1.00 94.55 C
ATOM 7 C4' C A 8 22.616 11.952 46.607 1.00 93.35 C
ATOM 8 O4' C A 8 21.954 10.665 46.507 1.00 95.36 O
ATOM 9 C3' C A 8 22.637 12.296 48.101 1.00 95.61 C
ATOM 10 O3' C A 8 21.635 13.207 48.531 1.00 94.33 O
ATOM 11 C2' C A 8 22.437 10.988 48.841 1.00 95.95 C
ATOM 12 O2' C A 8 21.545 11.163 49.922 1.00 97.77 O
ATOM 13 C1' C A 8 21.698 10.162 47.799 1.00100.46 C
ATOM 14 N1 C A 8 21.906 8.719 47.861 1.00105.13 N
ATOM 15 C2 C A 8 20.981 7.961 48.589 1.00106.18 C
ATOM 16 O2 C A 8 20.008 8.535 49.109 1.00105.47 O
ATOM 17 N3 C A 8 21.163 6.633 48.706 1.00107.58 N
ATOM 18 C4 C A 8 22.218 6.052 48.128 1.00108.79 C
ATOM 19 N4 C A 8 22.368 4.731 48.293 1.00112.27 N
ATOM 20 C5 C A 8 23.167 6.798 47.360 1.00107.92 C
ATOM 21 C6 C A 8 22.971 8.117 47.254 1.00106.67 C
ATOM 22 P A A 9 21.742 14.764 48.194 1.00 99.82 P
ATOM 23 OP1 A A 9 20.527 15.384 48.786 1.00 96.20 O
ATOM 24 OP2 A A 9 22.027 14.922 46.730 1.00 94.75 O
ATOM 25 O5' A A 9 22.996 15.264 49.036 1.00 93.01 O
TER
ATOM 1 O3' G B 5 27.108 4.090 47.839 1.00 96.52 O
ATOM 2 P U B 6 25.726 4.250 48.617 1.00 99.72 P
ATOM 3 OP1 U B 6 25.562 3.143 49.585 1.00 98.26 O
ATOM 4 OP2 U B 6 24.718 4.463 47.557 1.00 96.51 O
ATOM 5 O5' U B 6 25.882 5.561 49.498 1.00100.03 O
ATOM 6 C5' U B 6 25.100 5.697 50.669 1.00 98.27 C
ATOM 7 C4' U B 6 25.803 6.553 51.686 1.00 99.25 C
ATOM 8 O4' U B 6 27.069 5.938 52.034 1.00102.53 O
ATOM 9 C3' U B 6 26.151 7.918 51.108 1.00 97.98 C
ATOM 10 O3' U B 6 25.774 8.968 51.976 1.00 96.98 O
ATOM 11 C2' U B 6 27.617 7.856 50.695 1.00 96.58 C
ATOM 12 O2' U B 6 28.319 9.045 51.006 1.00 99.19 O
ATOM 13 C1' U B 6 28.138 6.752 51.611 1.00 97.79 C
ATOM 14 N1 U B 6 29.243 5.927 51.118 1.00 99.30 N
ATOM 15 C2 U B 6 30.480 6.171 51.680 1.00 99.53 C
ATOM 16 O2 U B 6 30.641 6.981 52.575 1.00100.81 O
ATOM 17 N3 U B 6 31.513 5.434 51.160 1.00100.20 N
ATOM 18 C4 U B 6 31.434 4.491 50.153 1.00101.24 C
ATOM 19 O4 U B 6 32.475 4.002 49.699 1.00101.99 O
ATOM 20 C5 U B 6 30.104 4.269 49.646 1.00101.60 C
ATOM 21 C6 U B 6 29.078 4.979 50.139 1.00 99.94 C
ATOM 22 P A B 7 25.112 10.292 51.390 1.00 98.31 P
ATOM 23 OP1 A B 7 24.998 11.227 52.539 1.00 95.64 O
ATOM 24 OP2 A B 7 23.902 9.900 50.626 1.00 89.64 O
ATOM 25 O5' A B 7 26.198 10.855 50.373 1.00 93.96 O
TER
ATOM 2 P C A 8 25.965 10.049 46.030 1.00 97.10 P
ATOM 3 OP1 C A 8 25.934 8.655 46.537 1.00101.54 O
ATOM 4 OP2 C A 8 25.889 10.304 44.560 1.00 93.21 O
ATOM 5 O5' C A 8 24.812 10.886 46.755 1.00 95.72 O
ATOM 6 C5' C A 8 24.019 11.833 46.027 1.00 94.55 C
ATOM 7 C4' C A 8 22.616 11.952 46.607 1.00 93.35 C
ATOM 8 O4' C A 8 21.954 10.665 46.507 1.00 95.36 O
ATOM 9 C3' C A 8 22.637 12.296 48.101 1.00 95.61 C
ATOM 10 O3' C A 8 21.635 13.207 48.531 1.00 94.33 O
ATOM 11 C2' C A 8 22.437 10.988 48.841 1.00 95.95 C
ATOM 12 O2' C A 8 21.545 11.163 49.922 1.00 97.77 O
ATOM 13 C1' C A 8 21.698 10.162 47.799 1.00100.46 C
ATOM 14 N1 C A 8 21.906 8.719 47.861 1.00105.13 N
ATOM 15 C2 C A 8 20.981 7.961 48.589 1.00106.18 C
ATOM 16 O2 C A 8 20.008 8.535 49.109 1.00105.47 O
ATOM 17 N3 C A 8 21.163 6.633 48.706 1.00107.58 N
ATOM 18 C4 C A 8 22.218 6.052 48.128 1.00108.79 C
ATOM 19 N4 C A 8 22.368 4.731 48.293 1.00112.27 N
ATOM 20 C5 C A 8 23.167 6.798 47.360 1.00107.92 C
ATOM 21 C6 C A 8 22.971 8.117 47.254 1.00106.67 C
ATOM 22 P A A 9 21.742 14.764 48.194 1.00 99.82 P
ATOM 23 OP1 A A 9 20.527 15.384 48.786 1.00 96.20 O
ATOM 24 OP2 A A 9 22.027 14.922 46.730 1.00 94.75 O
ATOM 25 O5' A A 9 22.996 15.264 49.036 1.00 93.01 O
TER
ATOM 1 O3' G B 5 27.108 4.090 47.839 1.00 96.52 O
ATOM 2 P U B 6 25.726 4.250 48.617 1.00 99.72 P
ATOM 3 OP1 U B 6 25.562 3.143 49.585 1.00 98.26 O
ATOM 4 OP2 U B 6 24.718 4.463 47.557 1.00 96.51 O
ATOM 5 O5' U B 6 25.882 5.561 49.498 1.00100.03 O
ATOM 6 C5' U B 6 25.100 5.697 50.669 1.00 98.27 C
ATOM 7 C4' U B 6 25.803 6.553 51.686 1.00 99.25 C
ATOM 8 O4' U B 6 27.069 5.938 52.034 1.00102.53 O
ATOM 9 C3' U B 6 26.151 7.918 51.108 1.00 97.98 C
ATOM 10 O3' U B 6 25.774 8.968 51.976 1.00 96.98 O
ATOM 11 C2' U B 6 27.617 7.856 50.695 1.00 96.58 C
ATOM 12 O2' U B 6 28.319 9.045 51.006 1.00 99.19 O
ATOM 13 C1' U B 6 28.138 6.752 51.611 1.00 97.79 C
ATOM 14 N1 U B 6 29.243 5.927 51.118 1.00 99.30 N
ATOM 15 C2 U B 6 30.480 6.171 51.680 1.00 99.53 C
ATOM 16 O2 U B 6 30.641 6.981 52.575 1.00100.81 O
ATOM 17 N3 U B 6 31.513 5.434 51.160 1.00100.20 N
ATOM 18 C4 U B 6 31.434 4.491 50.153 1.00101.24 C
ATOM 19 O4 U B 6 32.475 4.002 49.699 1.00101.99 O
ATOM 20 C5 U B 6 30.104 4.269 49.646 1.00101.60 C
ATOM 21 C6 U B 6 29.078 4.979 50.139 1.00 99.94 C
ATOM 22 P A B 7 25.112 10.292 51.390 1.00 98.31 P
ATOM 23 OP1 A B 7 24.998 11.227 52.539 1.00 95.64 O
ATOM 24 OP2 A B 7 23.902 9.900 50.626 1.00 89.64 O
ATOM 25 O5' A B 7 26.198 10.855 50.373 1.00 93.96 O
TER
Atoms:
C2: (20.981,7.961,48.589)
OP1: (25.934,8.655,46.537)
OP2: (25.889,10.304,44.560)
C4: (22.218,6.052,48.128)
O5': (24.812,10.886,46.755)
C3': (22.637,12.296,48.101)
C1': (21.698,10.162,47.799)
O4': (21.954,10.665,46.507)
C5': (24.019,11.833,46.027)
P: (25.965,10.049,46.030)
O2: (20.008,8.535,49.109)
C4': (22.616,11.952,46.607)
C2': (22.437,10.988,48.841)
O2': (21.545,11.163,49.922)
N1: (21.906,8.719,47.861)
N3: (21.163,6.633,48.706)
N4: (22.368,4.731,48.293)
C6: (22.971,8.117,47.254)
C5: (23.167,6.798,47.360)
O3': (21.635,13.207,48.531)
OP1: (25.934,8.655,46.537)
OP2: (25.889,10.304,44.560)
C4: (22.218,6.052,48.128)
O5': (24.812,10.886,46.755)
C3': (22.637,12.296,48.101)
C1': (21.698,10.162,47.799)
O4': (21.954,10.665,46.507)
C5': (24.019,11.833,46.027)
P: (25.965,10.049,46.030)
O2: (20.008,8.535,49.109)
C4': (22.616,11.952,46.607)
C2': (22.437,10.988,48.841)
O2': (21.545,11.163,49.922)
N1: (21.906,8.719,47.861)
N3: (21.163,6.633,48.706)
N4: (22.368,4.731,48.293)
C6: (22.971,8.117,47.254)
C5: (23.167,6.798,47.360)
O3': (21.635,13.207,48.531)
C4: (31.434,4.491,50.153)
N3: (31.513,5.434,51.160)
OP1: (25.562,3.143,49.585)
OP2: (24.718,4.463,47.557)
C2: (30.480,6.171,51.680)
C1': (28.138,6.752,51.611)
C3': (26.151,7.918,51.108)
O5': (25.882,5.561,49.498)
O4': (27.069,5.938,52.034)
C5': (25.100,5.697,50.669)
P: (25.726,4.250,48.617)
C4': (25.803,6.553,51.686)
C2': (27.617,7.856,50.695)
O2': (28.319,9.045,51.006)
N1: (29.243,5.927,51.118)
O4: (32.475,4.002,49.699)
O2: (30.641,6.981,52.575)
C6: (29.078,4.979,50.139)
C5: (30.104,4.269,49.646)
O3': (25.774,8.968,51.976)
N3: (31.513,5.434,51.160)
OP1: (25.562,3.143,49.585)
OP2: (24.718,4.463,47.557)
C2: (30.480,6.171,51.680)
C1': (28.138,6.752,51.611)
C3': (26.151,7.918,51.108)
O5': (25.882,5.561,49.498)
O4': (27.069,5.938,52.034)
C5': (25.100,5.697,50.669)
P: (25.726,4.250,48.617)
C4': (25.803,6.553,51.686)
C2': (27.617,7.856,50.695)
O2': (28.319,9.045,51.006)
N1: (29.243,5.927,51.118)
O4: (32.475,4.002,49.699)
O2: (30.641,6.981,52.575)
C6: (29.078,4.979,50.139)
C5: (30.104,4.269,49.646)
O3': (25.774,8.968,51.976)
Image (generated by PyMOL):