ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1881:A1856

Extra

PDB:
ATOM 1 O3' G A1880 91.174 -19.243 0.619 1.00 38.65 O
ATOM 2 P C A1881 91.526 -20.755 1.079 1.00 50.83 P
ATOM 3 OP1 C A1881 90.266 -21.524 1.049 1.00 61.46 O
ATOM 4 OP2 C A1881 92.282 -20.677 2.358 1.00 48.56 O
ATOM 5 O5' C A1881 92.475 -21.259 -0.080 1.00 45.60 O
ATOM 6 C5' C A1881 93.710 -20.621 -0.337 1.00 42.88 C
ATOM 7 C4' C A1881 94.788 -21.635 -0.538 1.00 40.07 C
ATOM 8 O4' C A1881 94.444 -22.839 0.187 1.00 44.09 O
ATOM 9 C3' C A1881 94.982 -22.106 -1.964 1.00 44.14 C
ATOM 10 O3' C A1881 95.796 -21.232 -2.712 1.00 43.30 O
ATOM 11 C2' C A1881 95.582 -23.495 -1.784 1.00 51.12 C
ATOM 12 O2' C A1881 96.969 -23.416 -1.489 1.00 52.02 O
ATOM 13 C1' C A1881 94.855 -23.977 -0.537 1.00 49.38 C
ATOM 14 N1 C A1881 93.670 -24.782 -0.872 1.00 47.62 N
ATOM 15 C2 C A1881 93.869 -26.084 -1.352 1.00 60.46 C
ATOM 16 O2 C A1881 95.024 -26.541 -1.493 1.00 70.49 O
ATOM 17 N3 C A1881 92.788 -26.834 -1.670 1.00 65.90 N
ATOM 18 C4 C A1881 91.559 -26.342 -1.524 1.00 56.49 C
ATOM 19 N4 C A1881 90.543 -27.146 -1.854 1.00 53.73 N
ATOM 20 C5 C A1881 91.340 -25.018 -1.035 1.00 52.66 C
ATOM 21 C6 C A1881 92.412 -24.277 -0.727 1.00 52.30 C
ATOM 22 P A A1882 95.216 -20.503 -4.010 1.00 51.40 P
ATOM 23 OP1 A A1882 95.452 -21.406 -5.153 1.00 67.98 O
ATOM 24 OP2 A A1882 95.784 -19.129 -4.051 1.00 60.14 O
ATOM 25 O5' A A1882 93.675 -20.422 -3.705 1.00 50.34 O
TER

ATOM 1 O3' U B1855 85.613 -24.945 -1.180 1.00 37.69 O
ATOM 2 P U B1856 86.605 -26.184 -0.974 1.00 40.06 P
ATOM 3 OP1 U B1856 87.764 -25.970 -1.861 1.00 45.82 O
ATOM 4 OP2 U B1856 85.812 -27.418 -1.139 1.00 51.25 O
ATOM 5 O5' U B1856 87.027 -26.025 0.544 1.00 46.95 O
ATOM 6 C5' U B1856 87.909 -24.995 0.954 1.00 47.76 C
ATOM 7 C4' U B1856 88.728 -25.416 2.139 1.00 45.76 C
ATOM 8 O4' U B1856 89.451 -24.262 2.631 1.00 44.49 O
ATOM 9 C3' U B1856 87.920 -25.944 3.316 1.00 46.31 C
ATOM 10 O3' U B1856 88.713 -26.868 4.070 1.00 45.36 O
ATOM 11 C2' U B1856 87.706 -24.687 4.130 1.00 49.94 C
ATOM 12 O2' U B1856 87.387 -24.920 5.489 1.00 57.58 O
ATOM 13 C1' U B1856 89.063 -23.988 3.952 1.00 51.59 C
ATOM 14 N1 U B1856 89.015 -22.523 4.114 1.00 47.95 N
ATOM 15 C2 U B1856 89.876 -21.864 4.955 1.00 49.56 C
ATOM 16 O2 U B1856 90.742 -22.426 5.588 1.00 57.98 O
ATOM 17 N3 U B1856 89.695 -20.511 5.041 1.00 47.19 N
ATOM 18 C4 U B1856 88.757 -19.750 4.387 1.00 50.43 C
ATOM 19 O4 U B1856 88.678 -18.523 4.528 1.00 58.11 O
ATOM 20 C5 U B1856 87.914 -20.516 3.546 1.00 56.48 C
ATOM 21 C6 U B1856 88.066 -21.834 3.443 1.00 51.00 C
ATOM 22 P C B1857 88.818 -28.420 3.633 1.00 50.01 P
ATOM 23 OP1 C B1857 87.762 -28.673 2.625 1.00 77.10 O
ATOM 24 OP2 C B1857 88.810 -29.222 4.884 1.00 81.49 O
ATOM 25 O5' C B1857 90.247 -28.500 2.949 1.00 40.29 O
TER

Atoms:
C2: (93.869,-26.084,-1.352)
OP1: (90.266,-21.524,1.049)
OP2: (92.282,-20.677,2.358)
C4: (91.559,-26.342,-1.524)
O5': (92.475,-21.259,-0.080)
C3': (94.982,-22.106,-1.964)
C1': (94.855,-23.977,-0.537)
O4': (94.444,-22.839,0.187)
C5': (93.710,-20.621,-0.337)
P: (91.526,-20.755,1.079)
O2: (95.024,-26.541,-1.493)
C4': (94.788,-21.635,-0.538)
C2': (95.582,-23.495,-1.784)
O2': (96.969,-23.416,-1.489)
N1: (93.670,-24.782,-0.872)
N3: (92.788,-26.834,-1.670)
N4: (90.543,-27.146,-1.854)
C6: (92.412,-24.277,-0.727)
C5: (91.340,-25.018,-1.035)
O3': (95.796,-21.232,-2.712)
C4: (88.757,-19.750,4.387)
N3: (89.695,-20.511,5.041)
OP1: (87.764,-25.970,-1.861)
OP2: (85.812,-27.418,-1.139)
C2: (89.876,-21.864,4.955)
C1': (89.063,-23.988,3.952)
C3': (87.920,-25.944,3.316)
O5': (87.027,-26.025,0.544)
O4': (89.451,-24.262,2.631)
C5': (87.909,-24.995,0.954)
P: (86.605,-26.184,-0.974)
C4': (88.728,-25.416,2.139)
C2': (87.706,-24.687,4.130)
O2': (87.387,-24.920,5.489)
N1: (89.015,-22.523,4.114)
O4: (88.678,-18.523,4.528)
O2: (90.742,-22.426,5.588)
C6: (88.066,-21.834,3.443)
C5: (87.914,-20.516,3.546)
O3': (88.713,-26.868,4.070)
Image (generated by PyMOL):
PyMOL image
show in jmol