Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1348:A1346
Extra
PDB:
ATOM 1 O3' C A1347 2.326 -54.478 -28.082 1.00 52.84 O
ATOM 2 P C A1348 1.200 -53.335 -28.126 1.00 44.64 P
ATOM 3 OP1 C A1348 0.331 -53.652 -29.265 1.00 59.38 O
ATOM 4 OP2 C A1348 1.885 -52.020 -28.100 1.00 53.66 O
ATOM 5 O5' C A1348 0.427 -53.570 -26.758 1.00 44.92 O
ATOM 6 C5' C A1348 -0.195 -54.814 -26.495 1.00 47.79 C
ATOM 7 C4' C A1348 -0.841 -54.837 -25.139 1.00 43.84 C
ATOM 8 O4' C A1348 0.173 -54.978 -24.129 1.00 44.28 O
ATOM 9 C3' C A1348 -1.599 -53.585 -24.733 1.00 51.68 C
ATOM 10 O3' C A1348 -2.909 -53.540 -25.264 1.00 52.17 O
ATOM 11 C2' C A1348 -1.561 -53.657 -23.212 1.00 53.41 C
ATOM 12 O2' C A1348 -2.517 -54.589 -22.726 1.00 47.52 O
ATOM 13 C1' C A1348 -0.173 -54.235 -22.984 1.00 52.48 C
ATOM 14 N1 C A1348 0.839 -53.185 -22.804 1.00 50.14 N
ATOM 15 C2 C A1348 1.115 -52.693 -21.534 1.00 51.38 C
ATOM 16 O2 C A1348 0.475 -53.145 -20.586 1.00 60.73 O
ATOM 17 N3 C A1348 2.055 -51.740 -21.365 1.00 51.26 N
ATOM 18 C4 C A1348 2.717 -51.282 -22.430 1.00 57.20 C
ATOM 19 N4 C A1348 3.640 -50.332 -22.255 1.00 49.70 N
ATOM 20 C5 C A1348 2.452 -51.776 -23.739 1.00 59.25 C
ATOM 21 C6 C A1348 1.520 -52.725 -23.884 1.00 49.15 C
ATOM 22 P G A1349 -3.688 -52.144 -25.393 1.00 63.79 P
ATOM 23 OP1 G A1349 -5.064 -52.473 -25.861 1.00 68.44 O
ATOM 24 OP2 G A1349 -2.842 -51.235 -26.211 1.00 46.39 O
ATOM 25 O5' G A1349 -3.742 -51.616 -23.892 1.00 53.82 O
TER
ATOM 1 O3' U B1345 8.131 -47.137 -23.115 1.00 45.77 O
ATOM 2 P U B1346 7.322 -48.502 -23.300 1.00 38.94 P
ATOM 3 OP1 U B1346 5.932 -48.123 -23.671 1.00 70.35 O
ATOM 4 OP2 U B1346 7.544 -49.324 -22.088 1.00 41.31 O
ATOM 5 O5' U B1346 8.026 -49.138 -24.530 1.00 24.57 O
ATOM 6 C5' U B1346 8.512 -48.295 -25.544 1.00 39.98 C
ATOM 7 C4' U B1346 8.279 -48.893 -26.877 1.00 41.16 C
ATOM 8 O4' U B1346 9.559 -49.258 -27.434 1.00 30.01 O
ATOM 9 C3' U B1346 7.431 -50.142 -26.848 1.00 49.93 C
ATOM 10 O3' U B1346 6.479 -50.107 -27.977 1.00 37.97 O
ATOM 11 C2' U B1346 8.497 -51.280 -26.823 1.00 33.61 C
ATOM 12 O2' U B1346 8.144 -52.497 -27.414 1.00 48.57 O
ATOM 13 C1' U B1346 9.723 -50.657 -27.477 1.00 38.49 C
ATOM 14 N1 U B1346 11.025 -50.976 -26.783 1.00 45.90 N
ATOM 15 C2 U B1346 11.986 -51.833 -27.337 1.00 43.99 C
ATOM 16 O2 U B1346 11.881 -52.440 -28.365 1.00 48.65 O
ATOM 17 N3 U B1346 13.144 -52.030 -26.663 1.00 39.20 N
ATOM 18 C4 U B1346 13.495 -51.450 -25.481 1.00 45.02 C
ATOM 19 O4 U B1346 14.586 -51.742 -24.981 1.00 42.48 O
ATOM 20 C5 U B1346 12.504 -50.556 -24.968 1.00 40.71 C
ATOM 21 C6 U B1346 11.350 -50.344 -25.614 1.00 39.38 C
ATOM 22 P C B1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 23 OP1 C B1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 24 OP2 C B1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 25 O5' C B1347 5.597 -52.491 -28.190 1.00 30.87 O
TER
ATOM 2 P C A1348 1.200 -53.335 -28.126 1.00 44.64 P
ATOM 3 OP1 C A1348 0.331 -53.652 -29.265 1.00 59.38 O
ATOM 4 OP2 C A1348 1.885 -52.020 -28.100 1.00 53.66 O
ATOM 5 O5' C A1348 0.427 -53.570 -26.758 1.00 44.92 O
ATOM 6 C5' C A1348 -0.195 -54.814 -26.495 1.00 47.79 C
ATOM 7 C4' C A1348 -0.841 -54.837 -25.139 1.00 43.84 C
ATOM 8 O4' C A1348 0.173 -54.978 -24.129 1.00 44.28 O
ATOM 9 C3' C A1348 -1.599 -53.585 -24.733 1.00 51.68 C
ATOM 10 O3' C A1348 -2.909 -53.540 -25.264 1.00 52.17 O
ATOM 11 C2' C A1348 -1.561 -53.657 -23.212 1.00 53.41 C
ATOM 12 O2' C A1348 -2.517 -54.589 -22.726 1.00 47.52 O
ATOM 13 C1' C A1348 -0.173 -54.235 -22.984 1.00 52.48 C
ATOM 14 N1 C A1348 0.839 -53.185 -22.804 1.00 50.14 N
ATOM 15 C2 C A1348 1.115 -52.693 -21.534 1.00 51.38 C
ATOM 16 O2 C A1348 0.475 -53.145 -20.586 1.00 60.73 O
ATOM 17 N3 C A1348 2.055 -51.740 -21.365 1.00 51.26 N
ATOM 18 C4 C A1348 2.717 -51.282 -22.430 1.00 57.20 C
ATOM 19 N4 C A1348 3.640 -50.332 -22.255 1.00 49.70 N
ATOM 20 C5 C A1348 2.452 -51.776 -23.739 1.00 59.25 C
ATOM 21 C6 C A1348 1.520 -52.725 -23.884 1.00 49.15 C
ATOM 22 P G A1349 -3.688 -52.144 -25.393 1.00 63.79 P
ATOM 23 OP1 G A1349 -5.064 -52.473 -25.861 1.00 68.44 O
ATOM 24 OP2 G A1349 -2.842 -51.235 -26.211 1.00 46.39 O
ATOM 25 O5' G A1349 -3.742 -51.616 -23.892 1.00 53.82 O
TER
ATOM 1 O3' U B1345 8.131 -47.137 -23.115 1.00 45.77 O
ATOM 2 P U B1346 7.322 -48.502 -23.300 1.00 38.94 P
ATOM 3 OP1 U B1346 5.932 -48.123 -23.671 1.00 70.35 O
ATOM 4 OP2 U B1346 7.544 -49.324 -22.088 1.00 41.31 O
ATOM 5 O5' U B1346 8.026 -49.138 -24.530 1.00 24.57 O
ATOM 6 C5' U B1346 8.512 -48.295 -25.544 1.00 39.98 C
ATOM 7 C4' U B1346 8.279 -48.893 -26.877 1.00 41.16 C
ATOM 8 O4' U B1346 9.559 -49.258 -27.434 1.00 30.01 O
ATOM 9 C3' U B1346 7.431 -50.142 -26.848 1.00 49.93 C
ATOM 10 O3' U B1346 6.479 -50.107 -27.977 1.00 37.97 O
ATOM 11 C2' U B1346 8.497 -51.280 -26.823 1.00 33.61 C
ATOM 12 O2' U B1346 8.144 -52.497 -27.414 1.00 48.57 O
ATOM 13 C1' U B1346 9.723 -50.657 -27.477 1.00 38.49 C
ATOM 14 N1 U B1346 11.025 -50.976 -26.783 1.00 45.90 N
ATOM 15 C2 U B1346 11.986 -51.833 -27.337 1.00 43.99 C
ATOM 16 O2 U B1346 11.881 -52.440 -28.365 1.00 48.65 O
ATOM 17 N3 U B1346 13.144 -52.030 -26.663 1.00 39.20 N
ATOM 18 C4 U B1346 13.495 -51.450 -25.481 1.00 45.02 C
ATOM 19 O4 U B1346 14.586 -51.742 -24.981 1.00 42.48 O
ATOM 20 C5 U B1346 12.504 -50.556 -24.968 1.00 40.71 C
ATOM 21 C6 U B1346 11.350 -50.344 -25.614 1.00 39.38 C
ATOM 22 P C B1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 23 OP1 C B1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 24 OP2 C B1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 25 O5' C B1347 5.597 -52.491 -28.190 1.00 30.87 O
TER
Atoms:
C2: (1.115,-52.693,-21.534)
OP1: (0.331,-53.652,-29.265)
OP2: (1.885,-52.020,-28.100)
C4: (2.717,-51.282,-22.430)
O5': (0.427,-53.570,-26.758)
C3': (-1.599,-53.585,-24.733)
C1': (-0.173,-54.235,-22.984)
O4': (0.173,-54.978,-24.129)
C5': (-0.195,-54.814,-26.495)
P: (1.200,-53.335,-28.126)
O2: (0.475,-53.145,-20.586)
C4': (-0.841,-54.837,-25.139)
C2': (-1.561,-53.657,-23.212)
O2': (-2.517,-54.589,-22.726)
N1: (0.839,-53.185,-22.804)
N3: (2.055,-51.740,-21.365)
N4: (3.640,-50.332,-22.255)
C6: (1.520,-52.725,-23.884)
C5: (2.452,-51.776,-23.739)
O3': (-2.909,-53.540,-25.264)
OP1: (0.331,-53.652,-29.265)
OP2: (1.885,-52.020,-28.100)
C4: (2.717,-51.282,-22.430)
O5': (0.427,-53.570,-26.758)
C3': (-1.599,-53.585,-24.733)
C1': (-0.173,-54.235,-22.984)
O4': (0.173,-54.978,-24.129)
C5': (-0.195,-54.814,-26.495)
P: (1.200,-53.335,-28.126)
O2: (0.475,-53.145,-20.586)
C4': (-0.841,-54.837,-25.139)
C2': (-1.561,-53.657,-23.212)
O2': (-2.517,-54.589,-22.726)
N1: (0.839,-53.185,-22.804)
N3: (2.055,-51.740,-21.365)
N4: (3.640,-50.332,-22.255)
C6: (1.520,-52.725,-23.884)
C5: (2.452,-51.776,-23.739)
O3': (-2.909,-53.540,-25.264)
C4: (13.495,-51.450,-25.481)
N3: (13.144,-52.030,-26.663)
OP1: (5.932,-48.123,-23.671)
OP2: (7.544,-49.324,-22.088)
C2: (11.986,-51.833,-27.337)
C1': (9.723,-50.657,-27.477)
C3': (7.431,-50.142,-26.848)
O5': (8.026,-49.138,-24.530)
O4': (9.559,-49.258,-27.434)
C5': (8.512,-48.295,-25.544)
P: (7.322,-48.502,-23.300)
C4': (8.279,-48.893,-26.877)
C2': (8.497,-51.280,-26.823)
O2': (8.144,-52.497,-27.414)
N1: (11.025,-50.976,-26.783)
O4: (14.586,-51.742,-24.981)
O2: (11.881,-52.440,-28.365)
C6: (11.350,-50.344,-25.614)
C5: (12.504,-50.556,-24.968)
O3': (6.479,-50.107,-27.977)
N3: (13.144,-52.030,-26.663)
OP1: (5.932,-48.123,-23.671)
OP2: (7.544,-49.324,-22.088)
C2: (11.986,-51.833,-27.337)
C1': (9.723,-50.657,-27.477)
C3': (7.431,-50.142,-26.848)
O5': (8.026,-49.138,-24.530)
O4': (9.559,-49.258,-27.434)
C5': (8.512,-48.295,-25.544)
P: (7.322,-48.502,-23.300)
C4': (8.279,-48.893,-26.877)
C2': (8.497,-51.280,-26.823)
O2': (8.144,-52.497,-27.414)
N1: (11.025,-50.976,-26.783)
O4: (14.586,-51.742,-24.981)
O2: (11.881,-52.440,-28.365)
C6: (11.350,-50.344,-25.614)
C5: (12.504,-50.556,-24.968)
O3': (6.479,-50.107,-27.977)
Image (generated by PyMOL):