Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1391:A1390
Extra
PDB:
ATOM 1 O3' U A1390 -1.257 -48.035 29.459 1.00 0.01 O
ATOM 2 P C A1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 3 OP1 C A1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 4 OP2 C A1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 5 O5' C A1391 0.968 -49.128 29.136 1.00 0.01 O
ATOM 6 C5' C A1391 0.804 -50.434 29.652 1.00 0.01 C
ATOM 7 C4' C A1391 1.615 -51.423 28.878 1.00 0.01 C
ATOM 8 O4' C A1391 0.875 -51.842 27.706 1.00 0.01 O
ATOM 9 C3' C A1391 2.924 -50.893 28.341 1.00 0.01 C
ATOM 10 O3' C A1391 3.958 -51.052 29.250 1.00 0.01 O
ATOM 11 C2' C A1391 3.150 -51.695 27.089 1.00 0.01 C
ATOM 12 O2' C A1391 3.734 -52.943 27.428 1.00 0.01 O
ATOM 13 C1' C A1391 1.725 -51.923 26.593 1.00 0.01 C
ATOM 14 N1 C A1391 1.298 -50.910 25.627 1.00 0.01 N
ATOM 15 C2 C A1391 1.877 -50.781 24.391 1.00 0.01 C
ATOM 16 O2 C A1391 2.788 -51.547 24.131 1.00 0.01 O
ATOM 17 N3 C A1391 1.471 -49.834 23.525 1.00 0.01 N
ATOM 18 C4 C A1391 0.472 -49.055 23.890 1.00 0.01 C
ATOM 19 N4 C A1391 0.024 -48.128 23.072 1.00 0.01 N
ATOM 20 C5 C A1391 -0.154 -49.156 25.133 1.00 0.01 C
ATOM 21 C6 C A1391 0.293 -50.090 25.960 1.00 0.01 C
ATOM 22 P C A1392 5.008 -49.892 29.441 1.00 0.01 P
ATOM 23 OP1 C A1392 5.734 -50.195 30.676 1.00 0.01 O
ATOM 24 OP2 C A1392 4.265 -48.626 29.343 1.00 0.01 O
ATOM 25 O5' C A1392 5.973 -50.047 28.187 1.00 0.01 O
TER
ATOM 1 O3' U B1389 -2.301 -43.777 24.364 1.00 12.13 O
ATOM 2 P U B1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 3 OP1 U B1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 4 OP2 U B1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 5 O5' U B1390 -2.248 -45.700 25.951 1.00 0.01 O
ATOM 6 C5' U B1390 -2.082 -45.164 27.262 1.00 0.01 C
ATOM 7 C4' U B1390 -2.343 -46.180 28.367 1.00 0.01 C
ATOM 8 O4' U B1390 -3.766 -46.407 28.487 1.00 0.01 O
ATOM 9 C3' U B1390 -1.710 -47.555 28.190 1.00 0.01 C
ATOM 10 O3' U B1390 -1.257 -48.035 29.459 1.00 0.01 O
ATOM 11 C2' U B1390 -2.874 -48.396 27.681 1.00 0.01 C
ATOM 12 O2' U B1390 -2.784 -49.771 27.939 1.00 0.01 O
ATOM 13 C1' U B1390 -4.043 -47.774 28.406 1.00 0.01 C
ATOM 14 N1 U B1390 -5.273 -47.905 27.694 1.00 0.06 N
ATOM 15 C2 U B1390 -6.288 -48.547 28.287 1.00 0.06 C
ATOM 16 O2 U B1390 -6.191 -48.994 29.399 1.00 0.06 O
ATOM 17 N3 U B1390 -7.407 -48.640 27.533 1.00 0.06 N
ATOM 18 C4 U B1390 -7.596 -48.141 26.274 1.00 0.06 C
ATOM 19 O4 U B1390 -8.676 -48.307 25.728 1.00 0.06 O
ATOM 20 C5 U B1390 -6.479 -47.481 25.711 1.00 0.06 C
ATOM 21 C6 U B1390 -5.374 -47.392 26.444 1.00 0.06 C
ATOM 22 P C B1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 23 OP1 C B1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 24 OP2 C B1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 25 O5' C B1391 0.968 -49.128 29.136 1.00 0.01 O
TER
ATOM 2 P C A1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 3 OP1 C A1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 4 OP2 C A1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 5 O5' C A1391 0.968 -49.128 29.136 1.00 0.01 O
ATOM 6 C5' C A1391 0.804 -50.434 29.652 1.00 0.01 C
ATOM 7 C4' C A1391 1.615 -51.423 28.878 1.00 0.01 C
ATOM 8 O4' C A1391 0.875 -51.842 27.706 1.00 0.01 O
ATOM 9 C3' C A1391 2.924 -50.893 28.341 1.00 0.01 C
ATOM 10 O3' C A1391 3.958 -51.052 29.250 1.00 0.01 O
ATOM 11 C2' C A1391 3.150 -51.695 27.089 1.00 0.01 C
ATOM 12 O2' C A1391 3.734 -52.943 27.428 1.00 0.01 O
ATOM 13 C1' C A1391 1.725 -51.923 26.593 1.00 0.01 C
ATOM 14 N1 C A1391 1.298 -50.910 25.627 1.00 0.01 N
ATOM 15 C2 C A1391 1.877 -50.781 24.391 1.00 0.01 C
ATOM 16 O2 C A1391 2.788 -51.547 24.131 1.00 0.01 O
ATOM 17 N3 C A1391 1.471 -49.834 23.525 1.00 0.01 N
ATOM 18 C4 C A1391 0.472 -49.055 23.890 1.00 0.01 C
ATOM 19 N4 C A1391 0.024 -48.128 23.072 1.00 0.01 N
ATOM 20 C5 C A1391 -0.154 -49.156 25.133 1.00 0.01 C
ATOM 21 C6 C A1391 0.293 -50.090 25.960 1.00 0.01 C
ATOM 22 P C A1392 5.008 -49.892 29.441 1.00 0.01 P
ATOM 23 OP1 C A1392 5.734 -50.195 30.676 1.00 0.01 O
ATOM 24 OP2 C A1392 4.265 -48.626 29.343 1.00 0.01 O
ATOM 25 O5' C A1392 5.973 -50.047 28.187 1.00 0.01 O
TER
ATOM 1 O3' U B1389 -2.301 -43.777 24.364 1.00 12.13 O
ATOM 2 P U B1390 -1.454 -45.073 24.725 1.00 0.01 P
ATOM 3 OP1 U B1390 -0.148 -44.626 25.181 1.00 0.01 O
ATOM 4 OP2 U B1390 -1.527 -45.951 23.566 1.00 0.01 O
ATOM 5 O5' U B1390 -2.248 -45.700 25.951 1.00 0.01 O
ATOM 6 C5' U B1390 -2.082 -45.164 27.262 1.00 0.01 C
ATOM 7 C4' U B1390 -2.343 -46.180 28.367 1.00 0.01 C
ATOM 8 O4' U B1390 -3.766 -46.407 28.487 1.00 0.01 O
ATOM 9 C3' U B1390 -1.710 -47.555 28.190 1.00 0.01 C
ATOM 10 O3' U B1390 -1.257 -48.035 29.459 1.00 0.01 O
ATOM 11 C2' U B1390 -2.874 -48.396 27.681 1.00 0.01 C
ATOM 12 O2' U B1390 -2.784 -49.771 27.939 1.00 0.01 O
ATOM 13 C1' U B1390 -4.043 -47.774 28.406 1.00 0.01 C
ATOM 14 N1 U B1390 -5.273 -47.905 27.694 1.00 0.06 N
ATOM 15 C2 U B1390 -6.288 -48.547 28.287 1.00 0.06 C
ATOM 16 O2 U B1390 -6.191 -48.994 29.399 1.00 0.06 O
ATOM 17 N3 U B1390 -7.407 -48.640 27.533 1.00 0.06 N
ATOM 18 C4 U B1390 -7.596 -48.141 26.274 1.00 0.06 C
ATOM 19 O4 U B1390 -8.676 -48.307 25.728 1.00 0.06 O
ATOM 20 C5 U B1390 -6.479 -47.481 25.711 1.00 0.06 C
ATOM 21 C6 U B1390 -5.374 -47.392 26.444 1.00 0.06 C
ATOM 22 P C B1391 0.300 -47.886 29.864 1.00 0.01 P
ATOM 23 OP1 C B1391 0.411 -48.055 31.326 1.00 0.01 O
ATOM 24 OP2 C B1391 0.778 -46.629 29.279 1.00 0.01 O
ATOM 25 O5' C B1391 0.968 -49.128 29.136 1.00 0.01 O
TER
Atoms:
C2: (1.877,-50.781,24.391)
OP1: (0.411,-48.055,31.326)
OP2: (0.778,-46.629,29.279)
C4: (0.472,-49.055,23.890)
O5': (0.968,-49.128,29.136)
C3': (2.924,-50.893,28.341)
C1': (1.725,-51.923,26.593)
O4': (0.875,-51.842,27.706)
C5': (0.804,-50.434,29.652)
P: (0.300,-47.886,29.864)
O2: (2.788,-51.547,24.131)
C4': (1.615,-51.423,28.878)
C2': (3.150,-51.695,27.089)
O2': (3.734,-52.943,27.428)
N1: (1.298,-50.910,25.627)
N3: (1.471,-49.834,23.525)
N4: (0.024,-48.128,23.072)
C6: (0.293,-50.090,25.960)
C5: (-0.154,-49.156,25.133)
O3': (3.958,-51.052,29.250)
OP1: (0.411,-48.055,31.326)
OP2: (0.778,-46.629,29.279)
C4: (0.472,-49.055,23.890)
O5': (0.968,-49.128,29.136)
C3': (2.924,-50.893,28.341)
C1': (1.725,-51.923,26.593)
O4': (0.875,-51.842,27.706)
C5': (0.804,-50.434,29.652)
P: (0.300,-47.886,29.864)
O2: (2.788,-51.547,24.131)
C4': (1.615,-51.423,28.878)
C2': (3.150,-51.695,27.089)
O2': (3.734,-52.943,27.428)
N1: (1.298,-50.910,25.627)
N3: (1.471,-49.834,23.525)
N4: (0.024,-48.128,23.072)
C6: (0.293,-50.090,25.960)
C5: (-0.154,-49.156,25.133)
O3': (3.958,-51.052,29.250)
C4: (-7.596,-48.141,26.274)
N3: (-7.407,-48.640,27.533)
OP1: (-0.148,-44.626,25.181)
OP2: (-1.527,-45.951,23.566)
C2: (-6.288,-48.547,28.287)
C1': (-4.043,-47.774,28.406)
C3': (-1.710,-47.555,28.190)
O5': (-2.248,-45.700,25.951)
O4': (-3.766,-46.407,28.487)
C5': (-2.082,-45.164,27.262)
P: (-1.454,-45.073,24.725)
C4': (-2.343,-46.180,28.367)
C2': (-2.874,-48.396,27.681)
O2': (-2.784,-49.771,27.939)
N1: (-5.273,-47.905,27.694)
O4: (-8.676,-48.307,25.728)
O2: (-6.191,-48.994,29.399)
C6: (-5.374,-47.392,26.444)
C5: (-6.479,-47.481,25.711)
O3': (-1.257,-48.035,29.459)
N3: (-7.407,-48.640,27.533)
OP1: (-0.148,-44.626,25.181)
OP2: (-1.527,-45.951,23.566)
C2: (-6.288,-48.547,28.287)
C1': (-4.043,-47.774,28.406)
C3': (-1.710,-47.555,28.190)
O5': (-2.248,-45.700,25.951)
O4': (-3.766,-46.407,28.487)
C5': (-2.082,-45.164,27.262)
P: (-1.454,-45.073,24.725)
C4': (-2.343,-46.180,28.367)
C2': (-2.874,-48.396,27.681)
O2': (-2.784,-49.771,27.939)
N1: (-5.273,-47.905,27.694)
O4: (-8.676,-48.307,25.728)
O2: (-6.191,-48.994,29.399)
C6: (-5.374,-47.392,26.444)
C5: (-6.479,-47.481,25.711)
O3': (-1.257,-48.035,29.459)
Image (generated by PyMOL):