Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A563:A572
Extra
PDB:
ATOM 1 O3' A A 562 -78.047 -89.659 9.024 1.00 0.01 O
ATOM 2 P C A 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 3 OP1 C A 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 4 OP2 C A 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 5 O5' C A 563 -78.187 -88.383 11.112 1.00 0.01 O
ATOM 6 C5' C A 563 -77.529 -89.251 12.009 1.00 0.01 C
ATOM 7 C4' C A 563 -76.606 -88.502 12.932 1.00 0.01 C
ATOM 8 O4' C A 563 -75.610 -87.808 12.164 1.00 0.01 O
ATOM 9 C3' C A 563 -77.211 -87.393 13.749 1.00 0.01 C
ATOM 10 O3' C A 563 -77.966 -87.840 14.848 1.00 0.01 O
ATOM 11 C2' C A 563 -75.972 -86.631 14.144 1.00 0.01 C
ATOM 12 O2' C A 563 -75.226 -87.358 15.093 1.00 0.01 O
ATOM 13 C1' C A 563 -75.213 -86.650 12.846 1.00 0.01 C
ATOM 14 N1 C A 563 -75.528 -85.489 12.030 1.00 0.01 N
ATOM 15 C2 C A 563 -74.886 -84.280 12.265 1.00 0.01 C
ATOM 16 O2 C A 563 -74.037 -84.180 13.125 1.00 0.01 O
ATOM 17 N3 C A 563 -75.162 -83.190 11.563 1.00 0.01 N
ATOM 18 C4 C A 563 -76.066 -83.249 10.641 1.00 0.01 C
ATOM 19 N4 C A 563 -76.285 -82.135 9.972 1.00 0.01 N
ATOM 20 C5 C A 563 -76.760 -84.457 10.371 1.00 0.01 C
ATOM 21 C6 C A 563 -76.469 -85.547 11.083 1.00 0.01 C
ATOM 22 P C A 564 -79.250 -87.042 15.303 1.00 0.01 P
ATOM 23 OP1 C A 564 -79.917 -87.837 16.297 1.00 0.01 O
ATOM 24 OP2 C A 564 -79.969 -86.676 14.114 1.00 0.01 O
ATOM 25 O5' C A 564 -78.667 -85.761 15.974 1.00 0.01 O
TER
ATOM 1 O3' A B 571 -78.731 -82.712 5.308 1.00 0.01 O
ATOM 2 P U B 572 -78.988 -82.221 6.789 1.00 0.01 P
ATOM 3 OP1 U B 572 -77.749 -81.587 7.239 1.00 0.01 O
ATOM 4 OP2 U B 572 -79.503 -83.353 7.530 1.00 0.01 O
ATOM 5 O5' U B 572 -80.113 -81.134 6.603 1.00 0.01 O
ATOM 6 C5' U B 572 -79.777 -79.783 6.305 1.00 0.01 C
ATOM 7 C4' U B 572 -79.344 -79.623 4.876 1.00 0.01 C
ATOM 8 O4' U B 572 -80.358 -80.201 4.008 1.00 0.01 O
ATOM 9 C3' U B 572 -79.173 -78.187 4.402 1.00 0.01 C
ATOM 10 O3' U B 572 -78.218 -78.165 3.338 1.00 0.01 O
ATOM 11 C2' U B 572 -80.554 -77.909 3.832 1.00 0.01 C
ATOM 12 O2' U B 572 -80.645 -76.796 2.970 1.00 0.01 O
ATOM 13 C1' U B 572 -80.805 -79.225 3.113 1.00 0.01 C
ATOM 14 N1 U B 572 -82.195 -79.490 2.818 1.00 0.01 N
ATOM 15 C2 U B 572 -82.659 -78.916 1.678 1.00 0.01 C
ATOM 16 O2 U B 572 -81.959 -78.231 0.980 1.00 0.01 O
ATOM 17 N3 U B 572 -83.981 -79.155 1.418 1.00 0.01 N
ATOM 18 C4 U B 572 -84.853 -79.894 2.154 1.00 0.01 C
ATOM 19 O4 U B 572 -85.993 -79.991 1.775 1.00 0.01 O
ATOM 20 C5 U B 572 -84.284 -80.475 3.315 1.00 0.00 C
ATOM 21 C6 U B 572 -82.995 -80.256 3.610 1.00 0.01 C
ATOM 22 P A B 573 -76.653 -77.999 3.620 1.00 0.01 P
ATOM 23 OP1 A B 573 -76.012 -79.257 3.261 1.00 0.01 O
ATOM 24 OP2 A B 573 -76.515 -77.507 4.988 1.00 0.01 O
ATOM 25 O5' A B 573 -76.237 -76.883 2.578 1.00 0.01 O
TER
ATOM 2 P C A 563 -79.100 -88.951 9.964 1.00 0.01 P
ATOM 3 OP1 C A 563 -79.975 -89.976 10.490 1.00 0.01 O
ATOM 4 OP2 C A 563 -79.680 -87.855 9.198 1.00 0.01 O
ATOM 5 O5' C A 563 -78.187 -88.383 11.112 1.00 0.01 O
ATOM 6 C5' C A 563 -77.529 -89.251 12.009 1.00 0.01 C
ATOM 7 C4' C A 563 -76.606 -88.502 12.932 1.00 0.01 C
ATOM 8 O4' C A 563 -75.610 -87.808 12.164 1.00 0.01 O
ATOM 9 C3' C A 563 -77.211 -87.393 13.749 1.00 0.01 C
ATOM 10 O3' C A 563 -77.966 -87.840 14.848 1.00 0.01 O
ATOM 11 C2' C A 563 -75.972 -86.631 14.144 1.00 0.01 C
ATOM 12 O2' C A 563 -75.226 -87.358 15.093 1.00 0.01 O
ATOM 13 C1' C A 563 -75.213 -86.650 12.846 1.00 0.01 C
ATOM 14 N1 C A 563 -75.528 -85.489 12.030 1.00 0.01 N
ATOM 15 C2 C A 563 -74.886 -84.280 12.265 1.00 0.01 C
ATOM 16 O2 C A 563 -74.037 -84.180 13.125 1.00 0.01 O
ATOM 17 N3 C A 563 -75.162 -83.190 11.563 1.00 0.01 N
ATOM 18 C4 C A 563 -76.066 -83.249 10.641 1.00 0.01 C
ATOM 19 N4 C A 563 -76.285 -82.135 9.972 1.00 0.01 N
ATOM 20 C5 C A 563 -76.760 -84.457 10.371 1.00 0.01 C
ATOM 21 C6 C A 563 -76.469 -85.547 11.083 1.00 0.01 C
ATOM 22 P C A 564 -79.250 -87.042 15.303 1.00 0.01 P
ATOM 23 OP1 C A 564 -79.917 -87.837 16.297 1.00 0.01 O
ATOM 24 OP2 C A 564 -79.969 -86.676 14.114 1.00 0.01 O
ATOM 25 O5' C A 564 -78.667 -85.761 15.974 1.00 0.01 O
TER
ATOM 1 O3' A B 571 -78.731 -82.712 5.308 1.00 0.01 O
ATOM 2 P U B 572 -78.988 -82.221 6.789 1.00 0.01 P
ATOM 3 OP1 U B 572 -77.749 -81.587 7.239 1.00 0.01 O
ATOM 4 OP2 U B 572 -79.503 -83.353 7.530 1.00 0.01 O
ATOM 5 O5' U B 572 -80.113 -81.134 6.603 1.00 0.01 O
ATOM 6 C5' U B 572 -79.777 -79.783 6.305 1.00 0.01 C
ATOM 7 C4' U B 572 -79.344 -79.623 4.876 1.00 0.01 C
ATOM 8 O4' U B 572 -80.358 -80.201 4.008 1.00 0.01 O
ATOM 9 C3' U B 572 -79.173 -78.187 4.402 1.00 0.01 C
ATOM 10 O3' U B 572 -78.218 -78.165 3.338 1.00 0.01 O
ATOM 11 C2' U B 572 -80.554 -77.909 3.832 1.00 0.01 C
ATOM 12 O2' U B 572 -80.645 -76.796 2.970 1.00 0.01 O
ATOM 13 C1' U B 572 -80.805 -79.225 3.113 1.00 0.01 C
ATOM 14 N1 U B 572 -82.195 -79.490 2.818 1.00 0.01 N
ATOM 15 C2 U B 572 -82.659 -78.916 1.678 1.00 0.01 C
ATOM 16 O2 U B 572 -81.959 -78.231 0.980 1.00 0.01 O
ATOM 17 N3 U B 572 -83.981 -79.155 1.418 1.00 0.01 N
ATOM 18 C4 U B 572 -84.853 -79.894 2.154 1.00 0.01 C
ATOM 19 O4 U B 572 -85.993 -79.991 1.775 1.00 0.01 O
ATOM 20 C5 U B 572 -84.284 -80.475 3.315 1.00 0.00 C
ATOM 21 C6 U B 572 -82.995 -80.256 3.610 1.00 0.01 C
ATOM 22 P A B 573 -76.653 -77.999 3.620 1.00 0.01 P
ATOM 23 OP1 A B 573 -76.012 -79.257 3.261 1.00 0.01 O
ATOM 24 OP2 A B 573 -76.515 -77.507 4.988 1.00 0.01 O
ATOM 25 O5' A B 573 -76.237 -76.883 2.578 1.00 0.01 O
TER
Atoms:
C2: (-74.886,-84.280,12.265)
OP1: (-79.975,-89.976,10.490)
OP2: (-79.680,-87.855,9.198)
C4: (-76.066,-83.249,10.641)
O5': (-78.187,-88.383,11.112)
C3': (-77.211,-87.393,13.749)
C1': (-75.213,-86.650,12.846)
O4': (-75.610,-87.808,12.164)
C5': (-77.529,-89.251,12.009)
P: (-79.100,-88.951,9.964)
O2: (-74.037,-84.180,13.125)
C4': (-76.606,-88.502,12.932)
C2': (-75.972,-86.631,14.144)
O2': (-75.226,-87.358,15.093)
N1: (-75.528,-85.489,12.030)
N3: (-75.162,-83.190,11.563)
N4: (-76.285,-82.135,9.972)
C6: (-76.469,-85.547,11.083)
C5: (-76.760,-84.457,10.371)
O3': (-77.966,-87.840,14.848)
OP1: (-79.975,-89.976,10.490)
OP2: (-79.680,-87.855,9.198)
C4: (-76.066,-83.249,10.641)
O5': (-78.187,-88.383,11.112)
C3': (-77.211,-87.393,13.749)
C1': (-75.213,-86.650,12.846)
O4': (-75.610,-87.808,12.164)
C5': (-77.529,-89.251,12.009)
P: (-79.100,-88.951,9.964)
O2: (-74.037,-84.180,13.125)
C4': (-76.606,-88.502,12.932)
C2': (-75.972,-86.631,14.144)
O2': (-75.226,-87.358,15.093)
N1: (-75.528,-85.489,12.030)
N3: (-75.162,-83.190,11.563)
N4: (-76.285,-82.135,9.972)
C6: (-76.469,-85.547,11.083)
C5: (-76.760,-84.457,10.371)
O3': (-77.966,-87.840,14.848)
C4: (-84.853,-79.894,2.154)
N3: (-83.981,-79.155,1.418)
OP1: (-77.749,-81.587,7.239)
OP2: (-79.503,-83.353,7.530)
C2: (-82.659,-78.916,1.678)
C1': (-80.805,-79.225,3.113)
C3': (-79.173,-78.187,4.402)
O5': (-80.113,-81.134,6.603)
O4': (-80.358,-80.201,4.008)
C5': (-79.777,-79.783,6.305)
P: (-78.988,-82.221,6.789)
C4': (-79.344,-79.623,4.876)
C2': (-80.554,-77.909,3.832)
O2': (-80.645,-76.796,2.970)
N1: (-82.195,-79.490,2.818)
O4: (-85.993,-79.991,1.775)
O2: (-81.959,-78.231,0.980)
C6: (-82.995,-80.256,3.610)
C5: (-84.284,-80.475,3.315)
O3': (-78.218,-78.165,3.338)
N3: (-83.981,-79.155,1.418)
OP1: (-77.749,-81.587,7.239)
OP2: (-79.503,-83.353,7.530)
C2: (-82.659,-78.916,1.678)
C1': (-80.805,-79.225,3.113)
C3': (-79.173,-78.187,4.402)
O5': (-80.113,-81.134,6.603)
O4': (-80.358,-80.201,4.008)
C5': (-79.777,-79.783,6.305)
P: (-78.988,-82.221,6.789)
C4': (-79.344,-79.623,4.876)
C2': (-80.554,-77.909,3.832)
O2': (-80.645,-76.796,2.970)
N1: (-82.195,-79.490,2.818)
O4: (-85.993,-79.991,1.775)
O2: (-81.959,-78.231,0.980)
C6: (-82.995,-80.256,3.610)
C5: (-84.284,-80.475,3.315)
O3': (-78.218,-78.165,3.338)
Image (generated by PyMOL):