Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2360:2378
Extra
PDB:
ATOM 1 O3' A A 359 -52.756 44.576 67.614 1.00 63.93 O
ATOM 2 P C A 360 -52.410 45.848 66.668 1.00 61.07 P
ATOM 3 OP1 C A 360 -52.254 45.339 65.292 1.00 61.24 O
ATOM 4 OP2 C A 360 -51.327 46.581 67.285 1.00 60.64 O
ATOM 5 O5' C A 360 -53.703 46.750 66.786 1.00 61.71 O
ATOM 6 C5' C A 360 -53.592 48.181 66.856 1.00 61.90 C
ATOM 7 C4' C A 360 -53.369 48.717 68.271 1.00 61.61 C
ATOM 8 O4' C A 360 -52.612 49.948 68.162 1.00 61.57 O
ATOM 9 C3' C A 360 -54.633 49.120 69.054 1.00 62.06 C
ATOM 10 O3' C A 360 -55.148 48.099 69.872 1.00 61.94 O
ATOM 11 C2' C A 360 -54.207 50.346 69.836 1.00 61.99 C
ATOM 12 O2' C A 360 -53.502 49.993 71.016 1.00 61.42 O
ATOM 13 C1' C A 360 -53.257 50.992 68.849 1.00 61.91 C
ATOM 14 N1 C A 360 -54.017 51.786 67.869 1.00 62.59 N
ATOM 15 C2 C A 360 -54.578 52.964 68.344 1.00 63.01 C
ATOM 16 O2 C A 360 -54.324 53.327 69.512 1.00 62.76 O
ATOM 17 N3 C A 360 -55.374 53.679 67.498 1.00 63.70 N
ATOM 18 C4 C A 360 -55.614 53.270 66.235 1.00 63.99 C
ATOM 19 N4 C A 360 -56.377 54.020 65.436 1.00 64.71 N
ATOM 20 C5 C A 360 -55.067 52.056 65.742 1.00 63.57 C
ATOM 21 C6 C A 360 -54.301 51.365 66.599 1.00 62.89 C
ATOM 22 P G A 361 -56.729 47.967 70.100 1.00 64.72 P
ATOM 23 OP1 G A 361 -56.943 46.696 70.836 1.00 64.47 O
ATOM 24 OP2 G A 361 -57.386 48.145 68.777 1.00 65.30 O
ATOM 25 O5' G A 361 -57.057 49.191 71.028 1.00 64.94 O
TER
ATOM 1 O3' A B 377 -56.550 50.488 62.191 1.00 67.48 O
ATOM 2 P U B 378 -57.858 51.323 62.611 1.00 60.72 P
ATOM 3 OP1 U B 378 -57.466 52.729 62.824 1.00 60.81 O
ATOM 4 OP2 U B 378 -58.475 50.614 63.686 1.00 60.57 O
ATOM 5 O5' U B 378 -58.756 51.202 61.335 1.00 61.51 O
ATOM 6 C5' U B 378 -58.343 51.737 60.110 1.00 61.81 C
ATOM 7 C4' U B 378 -59.342 51.388 59.081 1.00 62.56 C
ATOM 8 O4' U B 378 -59.406 49.952 58.990 1.00 62.30 O
ATOM 9 C3' U B 378 -60.761 51.780 59.407 1.00 63.27 C
ATOM 10 O3' U B 378 -61.024 53.160 59.164 1.00 63.82 O
ATOM 11 C2' U B 378 -61.560 50.814 58.536 1.00 63.76 C
ATOM 12 O2' U B 378 -61.594 51.251 57.185 1.00 64.36 O
ATOM 13 C1' U B 378 -60.693 49.555 58.606 1.00 63.01 C
ATOM 14 N1 U B 378 -61.185 48.590 59.585 1.00 62.74 N
ATOM 15 C2 U B 378 -62.143 47.717 59.134 1.00 63.22 C
ATOM 16 O2 U B 378 -62.527 47.750 57.991 1.00 63.83 O
ATOM 17 N3 U B 378 -62.621 46.826 60.053 1.00 63.01 N
ATOM 18 C4 U B 378 -62.202 46.742 61.358 1.00 62.36 C
ATOM 19 O4 U B 378 -62.707 45.891 62.076 1.00 62.26 O
ATOM 20 C5 U B 378 -61.185 47.677 61.755 1.00 61.88 C
ATOM 21 C6 U B 378 -60.702 48.557 60.875 1.00 62.07 C
ATOM 22 P U B 379 -61.826 54.082 60.238 1.00 81.92 P
ATOM 23 OP1 U B 379 -60.841 54.711 61.121 1.00 81.29 O
ATOM 24 OP2 U B 379 -62.898 53.253 60.839 1.00 82.09 O
ATOM 25 O5' U B 379 -62.459 55.192 59.311 1.00 82.87 O
TER
ATOM 2 P C A 360 -52.410 45.848 66.668 1.00 61.07 P
ATOM 3 OP1 C A 360 -52.254 45.339 65.292 1.00 61.24 O
ATOM 4 OP2 C A 360 -51.327 46.581 67.285 1.00 60.64 O
ATOM 5 O5' C A 360 -53.703 46.750 66.786 1.00 61.71 O
ATOM 6 C5' C A 360 -53.592 48.181 66.856 1.00 61.90 C
ATOM 7 C4' C A 360 -53.369 48.717 68.271 1.00 61.61 C
ATOM 8 O4' C A 360 -52.612 49.948 68.162 1.00 61.57 O
ATOM 9 C3' C A 360 -54.633 49.120 69.054 1.00 62.06 C
ATOM 10 O3' C A 360 -55.148 48.099 69.872 1.00 61.94 O
ATOM 11 C2' C A 360 -54.207 50.346 69.836 1.00 61.99 C
ATOM 12 O2' C A 360 -53.502 49.993 71.016 1.00 61.42 O
ATOM 13 C1' C A 360 -53.257 50.992 68.849 1.00 61.91 C
ATOM 14 N1 C A 360 -54.017 51.786 67.869 1.00 62.59 N
ATOM 15 C2 C A 360 -54.578 52.964 68.344 1.00 63.01 C
ATOM 16 O2 C A 360 -54.324 53.327 69.512 1.00 62.76 O
ATOM 17 N3 C A 360 -55.374 53.679 67.498 1.00 63.70 N
ATOM 18 C4 C A 360 -55.614 53.270 66.235 1.00 63.99 C
ATOM 19 N4 C A 360 -56.377 54.020 65.436 1.00 64.71 N
ATOM 20 C5 C A 360 -55.067 52.056 65.742 1.00 63.57 C
ATOM 21 C6 C A 360 -54.301 51.365 66.599 1.00 62.89 C
ATOM 22 P G A 361 -56.729 47.967 70.100 1.00 64.72 P
ATOM 23 OP1 G A 361 -56.943 46.696 70.836 1.00 64.47 O
ATOM 24 OP2 G A 361 -57.386 48.145 68.777 1.00 65.30 O
ATOM 25 O5' G A 361 -57.057 49.191 71.028 1.00 64.94 O
TER
ATOM 1 O3' A B 377 -56.550 50.488 62.191 1.00 67.48 O
ATOM 2 P U B 378 -57.858 51.323 62.611 1.00 60.72 P
ATOM 3 OP1 U B 378 -57.466 52.729 62.824 1.00 60.81 O
ATOM 4 OP2 U B 378 -58.475 50.614 63.686 1.00 60.57 O
ATOM 5 O5' U B 378 -58.756 51.202 61.335 1.00 61.51 O
ATOM 6 C5' U B 378 -58.343 51.737 60.110 1.00 61.81 C
ATOM 7 C4' U B 378 -59.342 51.388 59.081 1.00 62.56 C
ATOM 8 O4' U B 378 -59.406 49.952 58.990 1.00 62.30 O
ATOM 9 C3' U B 378 -60.761 51.780 59.407 1.00 63.27 C
ATOM 10 O3' U B 378 -61.024 53.160 59.164 1.00 63.82 O
ATOM 11 C2' U B 378 -61.560 50.814 58.536 1.00 63.76 C
ATOM 12 O2' U B 378 -61.594 51.251 57.185 1.00 64.36 O
ATOM 13 C1' U B 378 -60.693 49.555 58.606 1.00 63.01 C
ATOM 14 N1 U B 378 -61.185 48.590 59.585 1.00 62.74 N
ATOM 15 C2 U B 378 -62.143 47.717 59.134 1.00 63.22 C
ATOM 16 O2 U B 378 -62.527 47.750 57.991 1.00 63.83 O
ATOM 17 N3 U B 378 -62.621 46.826 60.053 1.00 63.01 N
ATOM 18 C4 U B 378 -62.202 46.742 61.358 1.00 62.36 C
ATOM 19 O4 U B 378 -62.707 45.891 62.076 1.00 62.26 O
ATOM 20 C5 U B 378 -61.185 47.677 61.755 1.00 61.88 C
ATOM 21 C6 U B 378 -60.702 48.557 60.875 1.00 62.07 C
ATOM 22 P U B 379 -61.826 54.082 60.238 1.00 81.92 P
ATOM 23 OP1 U B 379 -60.841 54.711 61.121 1.00 81.29 O
ATOM 24 OP2 U B 379 -62.898 53.253 60.839 1.00 82.09 O
ATOM 25 O5' U B 379 -62.459 55.192 59.311 1.00 82.87 O
TER
Atoms:
C2: (-54.578,52.964,68.344)
OP1: (-52.254,45.339,65.292)
OP2: (-51.327,46.581,67.285)
C4: (-55.614,53.270,66.235)
O5': (-53.703,46.750,66.786)
C3': (-54.633,49.120,69.054)
C1': (-53.257,50.992,68.849)
O4': (-52.612,49.948,68.162)
C5': (-53.592,48.181,66.856)
P: (-52.410,45.848,66.668)
O2: (-54.324,53.327,69.512)
C4': (-53.369,48.717,68.271)
C2': (-54.207,50.346,69.836)
O2': (-53.502,49.993,71.016)
N1: (-54.017,51.786,67.869)
N3: (-55.374,53.679,67.498)
N4: (-56.377,54.020,65.436)
C6: (-54.301,51.365,66.599)
C5: (-55.067,52.056,65.742)
O3': (-55.148,48.099,69.872)
OP1: (-52.254,45.339,65.292)
OP2: (-51.327,46.581,67.285)
C4: (-55.614,53.270,66.235)
O5': (-53.703,46.750,66.786)
C3': (-54.633,49.120,69.054)
C1': (-53.257,50.992,68.849)
O4': (-52.612,49.948,68.162)
C5': (-53.592,48.181,66.856)
P: (-52.410,45.848,66.668)
O2: (-54.324,53.327,69.512)
C4': (-53.369,48.717,68.271)
C2': (-54.207,50.346,69.836)
O2': (-53.502,49.993,71.016)
N1: (-54.017,51.786,67.869)
N3: (-55.374,53.679,67.498)
N4: (-56.377,54.020,65.436)
C6: (-54.301,51.365,66.599)
C5: (-55.067,52.056,65.742)
O3': (-55.148,48.099,69.872)
C4: (-62.202,46.742,61.358)
N3: (-62.621,46.826,60.053)
OP1: (-57.466,52.729,62.824)
OP2: (-58.475,50.614,63.686)
C2: (-62.143,47.717,59.134)
C1': (-60.693,49.555,58.606)
C3': (-60.761,51.780,59.407)
O5': (-58.756,51.202,61.335)
O4': (-59.406,49.952,58.990)
C5': (-58.343,51.737,60.110)
P: (-57.858,51.323,62.611)
C4': (-59.342,51.388,59.081)
C2': (-61.560,50.814,58.536)
O2': (-61.594,51.251,57.185)
N1: (-61.185,48.590,59.585)
O4: (-62.707,45.891,62.076)
O2: (-62.527,47.750,57.991)
C6: (-60.702,48.557,60.875)
C5: (-61.185,47.677,61.755)
O3': (-61.024,53.160,59.164)
N3: (-62.621,46.826,60.053)
OP1: (-57.466,52.729,62.824)
OP2: (-58.475,50.614,63.686)
C2: (-62.143,47.717,59.134)
C1': (-60.693,49.555,58.606)
C3': (-60.761,51.780,59.407)
O5': (-58.756,51.202,61.335)
O4': (-59.406,49.952,58.990)
C5': (-58.343,51.737,60.110)
P: (-57.858,51.323,62.611)
C4': (-59.342,51.388,59.081)
C2': (-61.560,50.814,58.536)
O2': (-61.594,51.251,57.185)
N1: (-61.185,48.590,59.585)
O4: (-62.707,45.891,62.076)
O2: (-62.527,47.750,57.991)
C6: (-60.702,48.557,60.875)
C5: (-61.185,47.677,61.755)
O3': (-61.024,53.160,59.164)
Image (generated by PyMOL):