Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1222:1220
Extra
PDB:
ATOM 1 O3' C A 221 106.714 5.080 109.034 1.00 50.89 O
ATOM 2 P C A 222 106.209 3.871 109.982 1.00 52.04 P
ATOM 3 OP1 C A 222 107.006 3.943 111.238 1.00 52.73 O
ATOM 4 OP2 C A 222 106.247 2.613 109.163 1.00 51.70 O
ATOM 5 O5' C A 222 104.708 4.254 110.286 1.00 51.70 O
ATOM 6 C5' C A 222 104.349 5.505 110.834 1.00 51.87 C
ATOM 7 C4' C A 222 102.869 5.540 111.061 1.00 51.49 C
ATOM 8 O4' C A 222 102.186 5.798 109.792 1.00 50.89 O
ATOM 9 C3' C A 222 102.264 4.224 111.507 1.00 51.36 C
ATOM 10 O3' C A 222 102.435 3.952 112.866 1.00 51.86 O
ATOM 11 C2' C A 222 100.816 4.356 111.078 1.00 50.79 C
ATOM 12 O2' C A 222 100.104 5.230 111.953 1.00 50.95 O
ATOM 13 C1' C A 222 100.992 5.046 109.728 1.00 50.45 C
ATOM 14 N1 C A 222 101.116 4.068 108.622 1.00 50.05 N
ATOM 15 C2 C A 222 99.961 3.551 107.987 1.00 49.47 C
ATOM 16 O2 C A 222 98.866 3.925 108.391 1.00 49.31 O
ATOM 17 N3 C A 222 100.092 2.678 106.948 1.00 49.13 N
ATOM 18 C4 C A 222 101.324 2.323 106.562 1.00 49.34 C
ATOM 19 N4 C A 222 101.518 1.457 105.584 1.00 49.05 N
ATOM 20 C5 C A 222 102.490 2.863 107.177 1.00 49.92 C
ATOM 21 C6 C A 222 102.363 3.714 108.196 1.00 50.26 C
ATOM 22 P C A 223 102.251 2.452 113.376 1.00 59.13 P
ATOM 23 OP1 C A 223 102.573 2.454 114.813 1.00 59.74 O
ATOM 24 OP2 C A 223 103.020 1.572 112.479 1.00 59.00 O
ATOM 25 O5' C A 223 100.710 2.192 113.154 1.00 58.57 O
TER
ATOM 1 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 2 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 3 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 4 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 5 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
ATOM 6 C5' U B 220 106.003 -1.229 105.044 1.00 56.70 C
ATOM 7 C4' U B 220 107.477 -1.159 105.149 1.00 57.20 C
ATOM 8 O4' U B 220 108.058 -2.206 104.347 1.00 57.11 O
ATOM 9 C3' U B 220 108.119 0.117 104.615 1.00 57.30 C
ATOM 10 O3' U B 220 107.994 1.190 105.530 1.00 57.59 O
ATOM 11 C2' U B 220 109.554 -0.333 104.320 1.00 57.66 C
ATOM 12 O2' U B 220 110.307 -0.429 105.515 1.00 58.27 O
ATOM 13 C1' U B 220 109.300 -1.764 103.818 1.00 57.38 C
ATOM 14 N1 U B 220 109.221 -1.862 102.357 1.00 56.92 N
ATOM 15 C2 U B 220 110.401 -2.118 101.674 1.00 57.11 C
ATOM 16 O2 U B 220 111.473 -2.192 102.233 1.00 57.63 O
ATOM 17 N3 U B 220 110.264 -2.259 100.315 1.00 56.69 N
ATOM 18 C4 U B 220 109.048 -2.193 99.648 1.00 56.11 C
ATOM 19 O4 U B 220 109.047 -2.354 98.436 1.00 55.78 O
ATOM 20 C5 U B 220 107.874 -1.955 100.447 1.00 55.95 C
ATOM 21 C6 U B 220 107.985 -1.808 101.758 1.00 56.35 C
ATOM 22 P C B 221 109.062 2.407 105.626 1.00 50.39 P
ATOM 23 OP1 C B 221 109.470 2.786 104.237 1.00 50.12 O
ATOM 24 OP2 C B 221 110.118 1.999 106.590 1.00 51.01 O
ATOM 25 O5' C B 221 108.136 3.542 106.294 1.00 50.36 O
TER
ATOM 2 P C A 222 106.209 3.871 109.982 1.00 52.04 P
ATOM 3 OP1 C A 222 107.006 3.943 111.238 1.00 52.73 O
ATOM 4 OP2 C A 222 106.247 2.613 109.163 1.00 51.70 O
ATOM 5 O5' C A 222 104.708 4.254 110.286 1.00 51.70 O
ATOM 6 C5' C A 222 104.349 5.505 110.834 1.00 51.87 C
ATOM 7 C4' C A 222 102.869 5.540 111.061 1.00 51.49 C
ATOM 8 O4' C A 222 102.186 5.798 109.792 1.00 50.89 O
ATOM 9 C3' C A 222 102.264 4.224 111.507 1.00 51.36 C
ATOM 10 O3' C A 222 102.435 3.952 112.866 1.00 51.86 O
ATOM 11 C2' C A 222 100.816 4.356 111.078 1.00 50.79 C
ATOM 12 O2' C A 222 100.104 5.230 111.953 1.00 50.95 O
ATOM 13 C1' C A 222 100.992 5.046 109.728 1.00 50.45 C
ATOM 14 N1 C A 222 101.116 4.068 108.622 1.00 50.05 N
ATOM 15 C2 C A 222 99.961 3.551 107.987 1.00 49.47 C
ATOM 16 O2 C A 222 98.866 3.925 108.391 1.00 49.31 O
ATOM 17 N3 C A 222 100.092 2.678 106.948 1.00 49.13 N
ATOM 18 C4 C A 222 101.324 2.323 106.562 1.00 49.34 C
ATOM 19 N4 C A 222 101.518 1.457 105.584 1.00 49.05 N
ATOM 20 C5 C A 222 102.490 2.863 107.177 1.00 49.92 C
ATOM 21 C6 C A 222 102.363 3.714 108.196 1.00 50.26 C
ATOM 22 P C A 223 102.251 2.452 113.376 1.00 59.13 P
ATOM 23 OP1 C A 223 102.573 2.454 114.813 1.00 59.74 O
ATOM 24 OP2 C A 223 103.020 1.572 112.479 1.00 59.00 O
ATOM 25 O5' C A 223 100.710 2.192 113.154 1.00 58.57 O
TER
ATOM 1 O3' A B 219 103.563 -2.215 103.117 1.00 56.86 O
ATOM 2 P U B 220 104.092 -0.719 103.349 1.00 55.62 P
ATOM 3 OP1 U B 220 103.347 -0.165 104.519 1.00 55.76 O
ATOM 4 OP2 U B 220 104.043 -0.011 102.072 1.00 55.28 O
ATOM 5 O5' U B 220 105.608 -0.956 103.725 1.00 56.19 O
ATOM 6 C5' U B 220 106.003 -1.229 105.044 1.00 56.70 C
ATOM 7 C4' U B 220 107.477 -1.159 105.149 1.00 57.20 C
ATOM 8 O4' U B 220 108.058 -2.206 104.347 1.00 57.11 O
ATOM 9 C3' U B 220 108.119 0.117 104.615 1.00 57.30 C
ATOM 10 O3' U B 220 107.994 1.190 105.530 1.00 57.59 O
ATOM 11 C2' U B 220 109.554 -0.333 104.320 1.00 57.66 C
ATOM 12 O2' U B 220 110.307 -0.429 105.515 1.00 58.27 O
ATOM 13 C1' U B 220 109.300 -1.764 103.818 1.00 57.38 C
ATOM 14 N1 U B 220 109.221 -1.862 102.357 1.00 56.92 N
ATOM 15 C2 U B 220 110.401 -2.118 101.674 1.00 57.11 C
ATOM 16 O2 U B 220 111.473 -2.192 102.233 1.00 57.63 O
ATOM 17 N3 U B 220 110.264 -2.259 100.315 1.00 56.69 N
ATOM 18 C4 U B 220 109.048 -2.193 99.648 1.00 56.11 C
ATOM 19 O4 U B 220 109.047 -2.354 98.436 1.00 55.78 O
ATOM 20 C5 U B 220 107.874 -1.955 100.447 1.00 55.95 C
ATOM 21 C6 U B 220 107.985 -1.808 101.758 1.00 56.35 C
ATOM 22 P C B 221 109.062 2.407 105.626 1.00 50.39 P
ATOM 23 OP1 C B 221 109.470 2.786 104.237 1.00 50.12 O
ATOM 24 OP2 C B 221 110.118 1.999 106.590 1.00 51.01 O
ATOM 25 O5' C B 221 108.136 3.542 106.294 1.00 50.36 O
TER
Atoms:
C2: (99.961,3.551,107.987)
OP1: (107.006,3.943,111.238)
OP2: (106.247,2.613,109.163)
C4: (101.324,2.323,106.562)
O5': (104.708,4.254,110.286)
C3': (102.264,4.224,111.507)
C1': (100.992,5.046,109.728)
O4': (102.186,5.798,109.792)
C5': (104.349,5.505,110.834)
P: (106.209,3.871,109.982)
O2: (98.866,3.925,108.391)
C4': (102.869,5.540,111.061)
C2': (100.816,4.356,111.078)
O2': (100.104,5.230,111.953)
N1: (101.116,4.068,108.622)
N3: (100.092,2.678,106.948)
N4: (101.518,1.457,105.584)
C6: (102.363,3.714,108.196)
C5: (102.490,2.863,107.177)
O3': (102.435,3.952,112.866)
OP1: (107.006,3.943,111.238)
OP2: (106.247,2.613,109.163)
C4: (101.324,2.323,106.562)
O5': (104.708,4.254,110.286)
C3': (102.264,4.224,111.507)
C1': (100.992,5.046,109.728)
O4': (102.186,5.798,109.792)
C5': (104.349,5.505,110.834)
P: (106.209,3.871,109.982)
O2: (98.866,3.925,108.391)
C4': (102.869,5.540,111.061)
C2': (100.816,4.356,111.078)
O2': (100.104,5.230,111.953)
N1: (101.116,4.068,108.622)
N3: (100.092,2.678,106.948)
N4: (101.518,1.457,105.584)
C6: (102.363,3.714,108.196)
C5: (102.490,2.863,107.177)
O3': (102.435,3.952,112.866)
C4: (109.048,-2.193,99.648)
N3: (110.264,-2.259,100.315)
OP1: (103.347,-0.165,104.519)
OP2: (104.043,-0.011,102.072)
C2: (110.401,-2.118,101.674)
C1': (109.300,-1.764,103.818)
C3': (108.119,0.117,104.615)
O5': (105.608,-0.956,103.725)
O4': (108.058,-2.206,104.347)
C5': (106.003,-1.229,105.044)
P: (104.092,-0.719,103.349)
C4': (107.477,-1.159,105.149)
C2': (109.554,-0.333,104.320)
O2': (110.307,-0.429,105.515)
N1: (109.221,-1.862,102.357)
O4: (109.047,-2.354,98.436)
O2: (111.473,-2.192,102.233)
C6: (107.985,-1.808,101.758)
C5: (107.874,-1.955,100.447)
O3': (107.994,1.190,105.530)
N3: (110.264,-2.259,100.315)
OP1: (103.347,-0.165,104.519)
OP2: (104.043,-0.011,102.072)
C2: (110.401,-2.118,101.674)
C1': (109.300,-1.764,103.818)
C3': (108.119,0.117,104.615)
O5': (105.608,-0.956,103.725)
O4': (108.058,-2.206,104.347)
C5': (106.003,-1.229,105.044)
P: (104.092,-0.719,103.349)
C4': (107.477,-1.159,105.149)
C2': (109.554,-0.333,104.320)
O2': (110.307,-0.429,105.515)
N1: (109.221,-1.862,102.357)
O4: (109.047,-2.354,98.436)
O2: (111.473,-2.192,102.233)
C6: (107.985,-1.808,101.758)
C5: (107.874,-1.955,100.447)
O3': (107.994,1.190,105.530)
Image (generated by PyMOL):