Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12844:12794
Extra
PDB:
ATOM 1 O3' A A2843 15.903 46.655 52.220 1.00 47.89 O
ATOM 2 P C A2844 16.178 46.700 50.665 1.00 53.27 P
ATOM 3 OP1 C A2844 16.557 45.353 50.246 1.00 52.79 O
ATOM 4 OP2 C A2844 17.087 47.807 50.427 1.00 53.55 O
ATOM 5 O5' C A2844 14.772 47.018 50.078 1.00 53.66 O
ATOM 6 C5' C A2844 13.779 46.021 50.077 1.00 53.47 C
ATOM 7 C4' C A2844 12.499 46.562 49.548 1.00 53.92 C
ATOM 8 O4' C A2844 12.509 46.553 48.130 1.00 54.07 O
ATOM 9 C3' C A2844 11.242 45.814 49.922 1.00 53.84 C
ATOM 10 O3' C A2844 10.759 46.290 51.131 1.00 53.97 O
ATOM 11 C2' C A2844 10.284 46.144 48.789 1.00 54.24 C
ATOM 12 O2' C A2844 9.384 47.167 49.192 1.00 54.73 O
ATOM 13 C1' C A2844 11.212 46.696 47.696 1.00 54.40 C
ATOM 14 N1 C A2844 11.039 46.013 46.441 1.00 54.34 N
ATOM 15 C2 C A2844 10.894 46.889 45.377 1.00 54.81 C
ATOM 16 O2 C A2844 11.050 48.096 45.633 1.00 55.18 O
ATOM 17 N3 C A2844 10.650 46.384 44.151 1.00 54.84 N
ATOM 18 C4 C A2844 10.523 45.043 44.061 1.00 54.41 C
ATOM 19 N4 C A2844 10.235 44.511 42.866 1.00 54.46 N
ATOM 20 C5 C A2844 10.636 44.137 45.164 1.00 53.94 C
ATOM 21 C6 C A2844 10.881 44.667 46.359 1.00 53.92 C
ATOM 22 P C A2845 10.356 45.332 52.318 1.00 51.22 P
ATOM 23 OP1 C A2845 11.599 44.707 52.852 1.00 50.74 O
ATOM 24 OP2 C A2845 9.233 44.459 51.825 1.00 51.17 O
ATOM 25 O5' C A2845 9.792 46.400 53.336 1.00 51.61 O
TER
ATOM 1 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 2 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 3 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 4 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 5 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
ATOM 6 C5' U B2794 10.252 37.897 43.157 1.00 45.95 C
ATOM 7 C4' U B2794 11.335 37.257 42.349 1.00 45.69 C
ATOM 8 O4' U B2794 11.125 37.570 40.949 1.00 46.04 O
ATOM 9 C3' U B2794 12.729 37.780 42.606 1.00 45.56 C
ATOM 10 O3' U B2794 13.330 37.274 43.760 1.00 45.15 O
ATOM 11 C2' U B2794 13.461 37.429 41.337 1.00 45.53 C
ATOM 12 O2' U B2794 13.799 36.070 41.325 1.00 45.09 O
ATOM 13 C1' U B2794 12.375 37.689 40.294 1.00 45.96 C
ATOM 14 N1 U B2794 12.506 39.053 39.774 1.00 46.43 N
ATOM 15 C2 U B2794 13.551 39.204 38.898 1.00 46.45 C
ATOM 16 O2 U B2794 14.252 38.276 38.492 1.00 46.13 O
ATOM 17 N3 U B2794 13.738 40.468 38.474 1.00 46.88 N
ATOM 18 C4 U B2794 13.053 41.548 38.842 1.00 47.27 C
ATOM 19 O4 U B2794 13.400 42.595 38.329 1.00 47.63 O
ATOM 20 C5 U B2794 12.031 41.321 39.797 1.00 47.21 C
ATOM 21 C6 U B2794 11.797 40.114 40.253 1.00 46.80 C
ATOM 22 P C B2795 14.334 38.210 44.560 1.00 44.78 P
ATOM 23 OP1 C B2795 14.757 37.468 45.759 1.00 44.34 O
ATOM 24 OP2 C B2795 13.675 39.492 44.717 1.00 45.26 O
ATOM 25 O5' C B2795 15.552 38.371 43.555 1.00 44.78 O
TER
ATOM 2 P C A2844 16.178 46.700 50.665 1.00 53.27 P
ATOM 3 OP1 C A2844 16.557 45.353 50.246 1.00 52.79 O
ATOM 4 OP2 C A2844 17.087 47.807 50.427 1.00 53.55 O
ATOM 5 O5' C A2844 14.772 47.018 50.078 1.00 53.66 O
ATOM 6 C5' C A2844 13.779 46.021 50.077 1.00 53.47 C
ATOM 7 C4' C A2844 12.499 46.562 49.548 1.00 53.92 C
ATOM 8 O4' C A2844 12.509 46.553 48.130 1.00 54.07 O
ATOM 9 C3' C A2844 11.242 45.814 49.922 1.00 53.84 C
ATOM 10 O3' C A2844 10.759 46.290 51.131 1.00 53.97 O
ATOM 11 C2' C A2844 10.284 46.144 48.789 1.00 54.24 C
ATOM 12 O2' C A2844 9.384 47.167 49.192 1.00 54.73 O
ATOM 13 C1' C A2844 11.212 46.696 47.696 1.00 54.40 C
ATOM 14 N1 C A2844 11.039 46.013 46.441 1.00 54.34 N
ATOM 15 C2 C A2844 10.894 46.889 45.377 1.00 54.81 C
ATOM 16 O2 C A2844 11.050 48.096 45.633 1.00 55.18 O
ATOM 17 N3 C A2844 10.650 46.384 44.151 1.00 54.84 N
ATOM 18 C4 C A2844 10.523 45.043 44.061 1.00 54.41 C
ATOM 19 N4 C A2844 10.235 44.511 42.866 1.00 54.46 N
ATOM 20 C5 C A2844 10.636 44.137 45.164 1.00 53.94 C
ATOM 21 C6 C A2844 10.881 44.667 46.359 1.00 53.92 C
ATOM 22 P C A2845 10.356 45.332 52.318 1.00 51.22 P
ATOM 23 OP1 C A2845 11.599 44.707 52.852 1.00 50.74 O
ATOM 24 OP2 C A2845 9.233 44.459 51.825 1.00 51.17 O
ATOM 25 O5' C A2845 9.792 46.400 53.336 1.00 51.61 O
TER
ATOM 1 O3' U B2793 7.995 39.827 42.394 1.00 51.02 O
ATOM 2 P U B2794 9.106 40.208 43.460 1.00 46.82 P
ATOM 3 OP1 U B2794 8.607 39.765 44.788 1.00 46.59 O
ATOM 4 OP2 U B2794 9.445 41.660 43.245 1.00 47.25 O
ATOM 5 O5' U B2794 10.315 39.295 43.026 1.00 46.38 O
ATOM 6 C5' U B2794 10.252 37.897 43.157 1.00 45.95 C
ATOM 7 C4' U B2794 11.335 37.257 42.349 1.00 45.69 C
ATOM 8 O4' U B2794 11.125 37.570 40.949 1.00 46.04 O
ATOM 9 C3' U B2794 12.729 37.780 42.606 1.00 45.56 C
ATOM 10 O3' U B2794 13.330 37.274 43.760 1.00 45.15 O
ATOM 11 C2' U B2794 13.461 37.429 41.337 1.00 45.53 C
ATOM 12 O2' U B2794 13.799 36.070 41.325 1.00 45.09 O
ATOM 13 C1' U B2794 12.375 37.689 40.294 1.00 45.96 C
ATOM 14 N1 U B2794 12.506 39.053 39.774 1.00 46.43 N
ATOM 15 C2 U B2794 13.551 39.204 38.898 1.00 46.45 C
ATOM 16 O2 U B2794 14.252 38.276 38.492 1.00 46.13 O
ATOM 17 N3 U B2794 13.738 40.468 38.474 1.00 46.88 N
ATOM 18 C4 U B2794 13.053 41.548 38.842 1.00 47.27 C
ATOM 19 O4 U B2794 13.400 42.595 38.329 1.00 47.63 O
ATOM 20 C5 U B2794 12.031 41.321 39.797 1.00 47.21 C
ATOM 21 C6 U B2794 11.797 40.114 40.253 1.00 46.80 C
ATOM 22 P C B2795 14.334 38.210 44.560 1.00 44.78 P
ATOM 23 OP1 C B2795 14.757 37.468 45.759 1.00 44.34 O
ATOM 24 OP2 C B2795 13.675 39.492 44.717 1.00 45.26 O
ATOM 25 O5' C B2795 15.552 38.371 43.555 1.00 44.78 O
TER
Atoms:
C2: (10.894,46.889,45.377)
OP1: (16.557,45.353,50.246)
OP2: (17.087,47.807,50.427)
C4: (10.523,45.043,44.061)
O5': (14.772,47.018,50.078)
C3': (11.242,45.814,49.922)
C1': (11.212,46.696,47.696)
O4': (12.509,46.553,48.130)
C5': (13.779,46.021,50.077)
P: (16.178,46.700,50.665)
O2: (11.050,48.096,45.633)
C4': (12.499,46.562,49.548)
C2': (10.284,46.144,48.789)
O2': (9.384,47.167,49.192)
N1: (11.039,46.013,46.441)
N3: (10.650,46.384,44.151)
N4: (10.235,44.511,42.866)
C6: (10.881,44.667,46.359)
C5: (10.636,44.137,45.164)
O3': (10.759,46.290,51.131)
OP1: (16.557,45.353,50.246)
OP2: (17.087,47.807,50.427)
C4: (10.523,45.043,44.061)
O5': (14.772,47.018,50.078)
C3': (11.242,45.814,49.922)
C1': (11.212,46.696,47.696)
O4': (12.509,46.553,48.130)
C5': (13.779,46.021,50.077)
P: (16.178,46.700,50.665)
O2: (11.050,48.096,45.633)
C4': (12.499,46.562,49.548)
C2': (10.284,46.144,48.789)
O2': (9.384,47.167,49.192)
N1: (11.039,46.013,46.441)
N3: (10.650,46.384,44.151)
N4: (10.235,44.511,42.866)
C6: (10.881,44.667,46.359)
C5: (10.636,44.137,45.164)
O3': (10.759,46.290,51.131)
C4: (13.053,41.548,38.842)
N3: (13.738,40.468,38.474)
OP1: (8.607,39.765,44.788)
OP2: (9.445,41.660,43.245)
C2: (13.551,39.204,38.898)
C1': (12.375,37.689,40.294)
C3': (12.729,37.780,42.606)
O5': (10.315,39.295,43.026)
O4': (11.125,37.570,40.949)
C5': (10.252,37.897,43.157)
P: (9.106,40.208,43.460)
C4': (11.335,37.257,42.349)
C2': (13.461,37.429,41.337)
O2': (13.799,36.070,41.325)
N1: (12.506,39.053,39.774)
O4: (13.400,42.595,38.329)
O2: (14.252,38.276,38.492)
C6: (11.797,40.114,40.253)
C5: (12.031,41.321,39.797)
O3': (13.330,37.274,43.760)
N3: (13.738,40.468,38.474)
OP1: (8.607,39.765,44.788)
OP2: (9.445,41.660,43.245)
C2: (13.551,39.204,38.898)
C1': (12.375,37.689,40.294)
C3': (12.729,37.780,42.606)
O5': (10.315,39.295,43.026)
O4': (11.125,37.570,40.949)
C5': (10.252,37.897,43.157)
P: (9.106,40.208,43.460)
C4': (11.335,37.257,42.349)
C2': (13.461,37.429,41.337)
O2': (13.799,36.070,41.325)
N1: (12.506,39.053,39.774)
O4: (13.400,42.595,38.329)
O2: (14.252,38.276,38.492)
C6: (11.797,40.114,40.253)
C5: (12.031,41.321,39.797)
O3': (13.330,37.274,43.760)
Image (generated by PyMOL):