Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B63:B112
Extra
PDB:
ATOM 1 O3' C A 62 50.944 26.313 121.660 1.00 71.52 O
ATOM 2 P C A 63 50.964 27.907 121.853 1.00 69.76 P
ATOM 3 OP1 C A 63 49.966 28.241 122.897 1.00 68.82 O
ATOM 4 OP2 C A 63 50.876 28.569 120.532 1.00 70.54 O
ATOM 5 O5' C A 63 52.397 28.173 122.485 1.00 69.04 O
ATOM 6 C5' C A 63 52.642 27.775 123.833 1.00 69.94 C
ATOM 7 C4' C A 63 53.953 28.323 124.326 1.00 71.53 C
ATOM 8 O4' C A 63 55.035 27.785 123.538 1.00 71.22 O
ATOM 9 C3' C A 63 54.148 29.826 124.252 1.00 72.61 C
ATOM 10 O3' C A 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 11 C2' C A 63 55.665 29.940 124.326 1.00 71.43 C
ATOM 12 O2' C A 63 56.138 29.750 125.652 1.00 70.49 O
ATOM 13 C1' C A 63 56.086 28.731 123.488 1.00 70.88 C
ATOM 14 N1 C A 63 56.395 29.015 122.076 1.00 69.92 N
ATOM 15 C2 C A 63 57.644 29.564 121.764 1.00 69.11 C
ATOM 16 O2 C A 63 58.420 29.842 122.690 1.00 68.70 O
ATOM 17 N3 C A 63 57.969 29.777 120.468 1.00 67.93 N
ATOM 18 C4 C A 63 57.096 29.469 119.502 1.00 67.57 C
ATOM 19 N4 C A 63 57.468 29.665 118.237 1.00 65.82 N
ATOM 20 C5 C A 63 55.804 28.937 119.793 1.00 68.24 C
ATOM 21 C6 C A 63 55.497 28.729 121.080 1.00 69.83 C
ATOM 22 P A A 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 23 OP1 A A 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 24 OP2 A A 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 25 O5' A A 64 53.884 32.820 124.762 1.00 77.87 O
TER
ATOM 1 O3' U B 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 2 P C B 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C B 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C B 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C B 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C B 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C B 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C B 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C B 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C B 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C B 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C B 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C B 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C B 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C B 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C B 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C B 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C B 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C B 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C B 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
TER
ATOM 2 P C A 63 50.964 27.907 121.853 1.00 69.76 P
ATOM 3 OP1 C A 63 49.966 28.241 122.897 1.00 68.82 O
ATOM 4 OP2 C A 63 50.876 28.569 120.532 1.00 70.54 O
ATOM 5 O5' C A 63 52.397 28.173 122.485 1.00 69.04 O
ATOM 6 C5' C A 63 52.642 27.775 123.833 1.00 69.94 C
ATOM 7 C4' C A 63 53.953 28.323 124.326 1.00 71.53 C
ATOM 8 O4' C A 63 55.035 27.785 123.538 1.00 71.22 O
ATOM 9 C3' C A 63 54.148 29.826 124.252 1.00 72.61 C
ATOM 10 O3' C A 63 53.519 30.420 125.384 1.00 76.08 O
ATOM 11 C2' C A 63 55.665 29.940 124.326 1.00 71.43 C
ATOM 12 O2' C A 63 56.138 29.750 125.652 1.00 70.49 O
ATOM 13 C1' C A 63 56.086 28.731 123.488 1.00 70.88 C
ATOM 14 N1 C A 63 56.395 29.015 122.076 1.00 69.92 N
ATOM 15 C2 C A 63 57.644 29.564 121.764 1.00 69.11 C
ATOM 16 O2 C A 63 58.420 29.842 122.690 1.00 68.70 O
ATOM 17 N3 C A 63 57.969 29.777 120.468 1.00 67.93 N
ATOM 18 C4 C A 63 57.096 29.469 119.502 1.00 67.57 C
ATOM 19 N4 C A 63 57.468 29.665 118.237 1.00 65.82 N
ATOM 20 C5 C A 63 55.804 28.937 119.793 1.00 68.24 C
ATOM 21 C6 C A 63 55.497 28.729 121.080 1.00 69.83 C
ATOM 22 P A A 64 52.743 31.821 125.234 1.00 77.71 P
ATOM 23 OP1 A A 64 52.321 32.233 126.601 1.00 78.11 O
ATOM 24 OP2 A A 64 51.723 31.723 124.159 1.00 77.40 O
ATOM 25 O5' A A 64 53.884 32.820 124.762 1.00 77.87 O
TER
ATOM 1 O3' U B 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 2 P C B 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C B 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C B 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C B 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C B 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C B 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C B 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C B 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C B 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C B 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C B 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C B 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C B 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C B 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C B 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C B 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C B 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C B 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C B 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
TER
Atoms:
C2: (57.644,29.564,121.764)
OP1: (49.966,28.241,122.897)
OP2: (50.876,28.569,120.532)
C4: (57.096,29.469,119.502)
O5': (52.397,28.173,122.485)
C3': (54.148,29.826,124.252)
C1': (56.086,28.731,123.488)
O4': (55.035,27.785,123.538)
C5': (52.642,27.775,123.833)
P: (50.964,27.907,121.853)
O2: (58.420,29.842,122.690)
C4': (53.953,28.323,124.326)
C2': (55.665,29.940,124.326)
O2': (56.138,29.750,125.652)
N1: (56.395,29.015,122.076)
N3: (57.969,29.777,120.468)
N4: (57.468,29.665,118.237)
C6: (55.497,28.729,121.080)
C5: (55.804,28.937,119.793)
O3': (53.519,30.420,125.384)
OP1: (49.966,28.241,122.897)
OP2: (50.876,28.569,120.532)
C4: (57.096,29.469,119.502)
O5': (52.397,28.173,122.485)
C3': (54.148,29.826,124.252)
C1': (56.086,28.731,123.488)
O4': (55.035,27.785,123.538)
C5': (52.642,27.775,123.833)
P: (50.964,27.907,121.853)
O2: (58.420,29.842,122.690)
C4': (53.953,28.323,124.326)
C2': (55.665,29.940,124.326)
O2': (56.138,29.750,125.652)
N1: (56.395,29.015,122.076)
N3: (57.969,29.777,120.468)
N4: (57.468,29.665,118.237)
C6: (55.497,28.729,121.080)
C5: (55.804,28.937,119.793)
O3': (53.519,30.420,125.384)
C2: (57.046,33.033,117.804)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
Image (generated by PyMOL):