ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:B63:B112

Extra

PDB:
ATOM 1 O3' C A 62 50.522 25.881 121.083 1.00 56.97 O
ATOM 2 P C A 63 50.510 27.477 121.323 1.00 58.08 P
ATOM 3 OP1 C A 63 49.493 27.753 122.365 1.00 57.96 O
ATOM 4 OP2 C A 63 50.432 28.196 120.027 1.00 57.55 O
ATOM 5 O5' C A 63 51.937 27.768 121.963 1.00 57.59 O
ATOM 6 C5' C A 63 52.231 27.334 123.295 1.00 58.14 C
ATOM 7 C4' C A 63 53.553 27.890 123.748 1.00 59.52 C
ATOM 8 O4' C A 63 54.602 27.383 122.897 1.00 59.00 O
ATOM 9 C3' C A 63 53.705 29.395 123.657 1.00 61.45 C
ATOM 10 O3' C A 63 53.142 30.003 124.814 1.00 65.90 O
ATOM 11 C2' C A 63 55.218 29.561 123.631 1.00 60.41 C
ATOM 12 O2' C A 63 55.795 29.448 124.917 1.00 61.84 O
ATOM 13 C1' C A 63 55.644 28.338 122.821 1.00 59.54 C
ATOM 14 N1 C A 63 55.973 28.584 121.404 1.00 58.63 N
ATOM 15 C2 C A 63 57.244 29.092 121.082 1.00 57.86 C
ATOM 16 O2 C A 63 58.038 29.372 121.998 1.00 56.34 O
ATOM 17 N3 C A 63 57.574 29.263 119.779 1.00 58.34 N
ATOM 18 C4 C A 63 56.697 28.950 118.821 1.00 57.44 C
ATOM 19 N4 C A 63 57.079 29.093 117.553 1.00 56.54 N
ATOM 20 C5 C A 63 55.391 28.466 119.122 1.00 57.12 C
ATOM 21 C6 C A 63 55.072 28.303 120.412 1.00 58.55 C
ATOM 22 P A A 64 52.332 31.385 124.683 1.00 68.80 P
ATOM 23 OP1 A A 64 51.897 31.766 126.058 1.00 67.99 O
ATOM 24 OP2 A A 64 51.313 31.234 123.608 1.00 67.85 O
ATOM 25 O5' A A 64 53.427 32.433 124.192 1.00 68.39 O
TER

ATOM 1 O3' U B 111 49.618 33.933 113.532 1.00 49.83 O
ATOM 2 P C B 112 50.042 32.430 113.879 1.00 50.29 P
ATOM 3 OP1 C B 112 49.978 31.650 112.616 1.00 49.32 O
ATOM 4 OP2 C B 112 49.224 32.023 115.037 1.00 50.13 O
ATOM 5 O5' C B 112 51.560 32.528 114.356 1.00 48.66 O
ATOM 6 C5' C B 112 52.577 33.022 113.479 1.00 47.17 C
ATOM 7 C4' C B 112 53.843 32.212 113.623 1.00 47.11 C
ATOM 8 O4' C B 112 54.588 32.647 114.795 1.00 47.56 O
ATOM 9 C3' C B 112 53.662 30.702 113.756 1.00 47.14 C
ATOM 10 O3' C B 112 54.600 30.037 112.921 1.00 47.82 O
ATOM 11 C2' C B 112 53.977 30.457 115.234 1.00 48.31 C
ATOM 12 O2' C B 112 54.509 29.176 115.492 1.00 49.06 O
ATOM 13 C1' C B 112 55.046 31.513 115.484 1.00 48.23 C
ATOM 14 N1 C B 112 55.379 31.873 116.885 1.00 50.24 N
ATOM 15 C2 C B 112 56.656 32.423 117.146 1.00 51.68 C
ATOM 16 O2 C B 112 57.433 32.625 116.199 1.00 52.21 O
ATOM 17 N3 C B 112 57.007 32.714 118.423 1.00 52.00 N
ATOM 18 C4 C B 112 56.153 32.476 119.423 1.00 52.29 C
ATOM 19 N4 C B 112 56.565 32.754 120.666 1.00 53.12 N
ATOM 20 C5 C B 112 54.846 31.939 119.192 1.00 51.42 C
ATOM 21 C6 C B 112 54.500 31.663 117.918 1.00 50.95 C
ATOM 22 P G B 113 54.086 29.238 111.619 1.00 47.68 P
ATOM 23 OP1 G B 113 53.095 28.234 112.056 1.00 47.71 O
ATOM 24 OP2 G B 113 55.257 28.819 110.799 1.00 45.69 O
ATOM 25 O5' G B 113 53.285 30.336 110.807 1.00 47.31 O
TER

Atoms:
C2: (57.244,29.092,121.082)
OP1: (49.493,27.753,122.365)
OP2: (50.432,28.196,120.027)
C4: (56.697,28.950,118.821)
O5': (51.937,27.768,121.963)
C3': (53.705,29.395,123.657)
C1': (55.644,28.338,122.821)
O4': (54.602,27.383,122.897)
C5': (52.231,27.334,123.295)
P: (50.510,27.477,121.323)
O2: (58.038,29.372,121.998)
C4': (53.553,27.890,123.748)
C2': (55.218,29.561,123.631)
O2': (55.795,29.448,124.917)
N1: (55.973,28.584,121.404)
N3: (57.574,29.263,119.779)
N4: (57.079,29.093,117.553)
C6: (55.072,28.303,120.412)
C5: (55.391,28.466,119.122)
O3': (53.142,30.003,124.814)
C2: (56.656,32.423,117.146)
OP1: (49.978,31.650,112.616)
OP2: (49.224,32.023,115.037)
C4: (56.153,32.476,119.423)
O5': (51.560,32.528,114.356)
C3': (53.662,30.702,113.756)
C1': (55.046,31.513,115.484)
O4': (54.588,32.647,114.795)
C5': (52.577,33.022,113.479)
P: (50.042,32.430,113.879)
O2: (57.433,32.625,116.199)
C4': (53.843,32.212,113.623)
C2': (53.977,30.457,115.234)
O2': (54.509,29.176,115.492)
N1: (55.379,31.873,116.885)
N3: (57.007,32.714,118.423)
N4: (56.565,32.754,120.666)
C6: (54.500,31.663,117.918)
C5: (54.846,31.939,119.192)
O3': (54.600,30.037,112.921)
Image (generated by PyMOL):
PyMOL image
show in jmol