Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:963:9112
Extra
PDB:
ATOM 1 O3' C A 62 50.624 25.611 121.380 1.00 77.48 O
ATOM 2 P C A 63 50.539 27.209 121.584 1.00 76.33 P
ATOM 3 OP1 C A 63 49.445 27.483 122.544 1.00 76.96 O
ATOM 4 OP2 C A 63 50.513 27.857 120.248 1.00 76.86 O
ATOM 5 O5' C A 63 51.911 27.589 122.297 1.00 75.51 O
ATOM 6 C5' C A 63 52.146 27.237 123.667 1.00 75.37 C
ATOM 7 C4' C A 63 53.456 27.815 124.137 1.00 76.03 C
ATOM 8 O4' C A 63 54.523 27.315 123.295 1.00 75.78 O
ATOM 9 C3' C A 63 53.588 29.325 124.048 1.00 77.60 C
ATOM 10 O3' C A 63 52.998 29.941 125.194 1.00 81.79 O
ATOM 11 C2' C A 63 55.101 29.513 124.008 1.00 76.79 C
ATOM 12 O2' C A 63 55.695 29.413 125.287 1.00 76.49 O
ATOM 13 C1' C A 63 55.539 28.297 123.186 1.00 75.99 C
ATOM 14 N1 C A 63 55.835 28.530 121.753 1.00 75.66 N
ATOM 15 C2 C A 63 57.100 29.042 121.389 1.00 74.70 C
ATOM 16 O2 C A 63 57.911 29.349 122.277 1.00 73.93 O
ATOM 17 N3 C A 63 57.398 29.190 120.076 1.00 73.62 N
ATOM 18 C4 C A 63 56.499 28.867 119.145 1.00 72.75 C
ATOM 19 N4 C A 63 56.849 29.007 117.865 1.00 71.84 N
ATOM 20 C5 C A 63 55.202 28.380 119.484 1.00 73.53 C
ATOM 21 C6 C A 63 54.913 28.231 120.786 1.00 75.02 C
ATOM 22 P A A 64 52.248 31.362 125.053 1.00 84.81 P
ATOM 23 OP1 A A 64 51.864 31.806 126.422 1.00 84.44 O
ATOM 24 OP2 A A 64 51.200 31.247 124.003 1.00 83.73 O
ATOM 25 O5' A A 64 53.383 32.352 124.529 1.00 86.00 O
TER
ATOM 1 O3' U B 111 49.608 33.676 113.798 1.00 67.34 O
ATOM 2 P C B 112 50.016 32.191 114.237 1.00 66.06 P
ATOM 3 OP1 C B 112 49.998 31.345 113.019 1.00 66.16 O
ATOM 4 OP2 C B 112 49.181 31.819 115.406 1.00 68.58 O
ATOM 5 O5' C B 112 51.526 32.321 114.722 1.00 64.61 O
ATOM 6 C5' C B 112 52.516 32.852 113.838 1.00 63.99 C
ATOM 7 C4' C B 112 53.806 32.081 113.951 1.00 62.55 C
ATOM 8 O4' C B 112 54.560 32.553 115.096 1.00 62.74 O
ATOM 9 C3' C B 112 53.694 30.567 114.101 1.00 62.47 C
ATOM 10 O3' C B 112 54.619 29.936 113.228 1.00 62.35 O
ATOM 11 C2' C B 112 54.110 30.339 115.554 1.00 62.33 C
ATOM 12 O2' C B 112 54.696 29.069 115.772 1.00 62.09 O
ATOM 13 C1' C B 112 55.139 31.450 115.743 1.00 61.19 C
ATOM 14 N1 C B 112 55.473 31.833 117.133 1.00 60.13 N
ATOM 15 C2 C B 112 56.739 32.405 117.390 1.00 60.09 C
ATOM 16 O2 C B 112 57.515 32.628 116.439 1.00 59.18 O
ATOM 17 N3 C B 112 57.083 32.700 118.667 1.00 59.77 N
ATOM 18 C4 C B 112 56.226 32.459 119.664 1.00 60.28 C
ATOM 19 N4 C B 112 56.625 32.742 120.906 1.00 58.98 N
ATOM 20 C5 C B 112 54.924 31.912 119.430 1.00 59.06 C
ATOM 21 C6 C B 112 54.591 31.623 118.163 1.00 60.06 C
ATOM 22 P G B 113 54.071 29.139 111.945 1.00 62.76 P
ATOM 23 OP1 G B 113 53.144 28.089 112.432 1.00 63.27 O
ATOM 24 OP2 G B 113 55.219 28.769 111.076 1.00 60.96 O
ATOM 25 O5' G B 113 53.198 30.226 111.179 1.00 62.84 O
TER
ATOM 2 P C A 63 50.539 27.209 121.584 1.00 76.33 P
ATOM 3 OP1 C A 63 49.445 27.483 122.544 1.00 76.96 O
ATOM 4 OP2 C A 63 50.513 27.857 120.248 1.00 76.86 O
ATOM 5 O5' C A 63 51.911 27.589 122.297 1.00 75.51 O
ATOM 6 C5' C A 63 52.146 27.237 123.667 1.00 75.37 C
ATOM 7 C4' C A 63 53.456 27.815 124.137 1.00 76.03 C
ATOM 8 O4' C A 63 54.523 27.315 123.295 1.00 75.78 O
ATOM 9 C3' C A 63 53.588 29.325 124.048 1.00 77.60 C
ATOM 10 O3' C A 63 52.998 29.941 125.194 1.00 81.79 O
ATOM 11 C2' C A 63 55.101 29.513 124.008 1.00 76.79 C
ATOM 12 O2' C A 63 55.695 29.413 125.287 1.00 76.49 O
ATOM 13 C1' C A 63 55.539 28.297 123.186 1.00 75.99 C
ATOM 14 N1 C A 63 55.835 28.530 121.753 1.00 75.66 N
ATOM 15 C2 C A 63 57.100 29.042 121.389 1.00 74.70 C
ATOM 16 O2 C A 63 57.911 29.349 122.277 1.00 73.93 O
ATOM 17 N3 C A 63 57.398 29.190 120.076 1.00 73.62 N
ATOM 18 C4 C A 63 56.499 28.867 119.145 1.00 72.75 C
ATOM 19 N4 C A 63 56.849 29.007 117.865 1.00 71.84 N
ATOM 20 C5 C A 63 55.202 28.380 119.484 1.00 73.53 C
ATOM 21 C6 C A 63 54.913 28.231 120.786 1.00 75.02 C
ATOM 22 P A A 64 52.248 31.362 125.053 1.00 84.81 P
ATOM 23 OP1 A A 64 51.864 31.806 126.422 1.00 84.44 O
ATOM 24 OP2 A A 64 51.200 31.247 124.003 1.00 83.73 O
ATOM 25 O5' A A 64 53.383 32.352 124.529 1.00 86.00 O
TER
ATOM 1 O3' U B 111 49.608 33.676 113.798 1.00 67.34 O
ATOM 2 P C B 112 50.016 32.191 114.237 1.00 66.06 P
ATOM 3 OP1 C B 112 49.998 31.345 113.019 1.00 66.16 O
ATOM 4 OP2 C B 112 49.181 31.819 115.406 1.00 68.58 O
ATOM 5 O5' C B 112 51.526 32.321 114.722 1.00 64.61 O
ATOM 6 C5' C B 112 52.516 32.852 113.838 1.00 63.99 C
ATOM 7 C4' C B 112 53.806 32.081 113.951 1.00 62.55 C
ATOM 8 O4' C B 112 54.560 32.553 115.096 1.00 62.74 O
ATOM 9 C3' C B 112 53.694 30.567 114.101 1.00 62.47 C
ATOM 10 O3' C B 112 54.619 29.936 113.228 1.00 62.35 O
ATOM 11 C2' C B 112 54.110 30.339 115.554 1.00 62.33 C
ATOM 12 O2' C B 112 54.696 29.069 115.772 1.00 62.09 O
ATOM 13 C1' C B 112 55.139 31.450 115.743 1.00 61.19 C
ATOM 14 N1 C B 112 55.473 31.833 117.133 1.00 60.13 N
ATOM 15 C2 C B 112 56.739 32.405 117.390 1.00 60.09 C
ATOM 16 O2 C B 112 57.515 32.628 116.439 1.00 59.18 O
ATOM 17 N3 C B 112 57.083 32.700 118.667 1.00 59.77 N
ATOM 18 C4 C B 112 56.226 32.459 119.664 1.00 60.28 C
ATOM 19 N4 C B 112 56.625 32.742 120.906 1.00 58.98 N
ATOM 20 C5 C B 112 54.924 31.912 119.430 1.00 59.06 C
ATOM 21 C6 C B 112 54.591 31.623 118.163 1.00 60.06 C
ATOM 22 P G B 113 54.071 29.139 111.945 1.00 62.76 P
ATOM 23 OP1 G B 113 53.144 28.089 112.432 1.00 63.27 O
ATOM 24 OP2 G B 113 55.219 28.769 111.076 1.00 60.96 O
ATOM 25 O5' G B 113 53.198 30.226 111.179 1.00 62.84 O
TER
Atoms:
C2: (57.100,29.042,121.389)
OP1: (49.445,27.483,122.544)
OP2: (50.513,27.857,120.248)
C4: (56.499,28.867,119.145)
O5': (51.911,27.589,122.297)
C3': (53.588,29.325,124.048)
C1': (55.539,28.297,123.186)
O4': (54.523,27.315,123.295)
C5': (52.146,27.237,123.667)
P: (50.539,27.209,121.584)
O2: (57.911,29.349,122.277)
C4': (53.456,27.815,124.137)
C2': (55.101,29.513,124.008)
O2': (55.695,29.413,125.287)
N1: (55.835,28.530,121.753)
N3: (57.398,29.190,120.076)
N4: (56.849,29.007,117.865)
C6: (54.913,28.231,120.786)
C5: (55.202,28.380,119.484)
O3': (52.998,29.941,125.194)
OP1: (49.445,27.483,122.544)
OP2: (50.513,27.857,120.248)
C4: (56.499,28.867,119.145)
O5': (51.911,27.589,122.297)
C3': (53.588,29.325,124.048)
C1': (55.539,28.297,123.186)
O4': (54.523,27.315,123.295)
C5': (52.146,27.237,123.667)
P: (50.539,27.209,121.584)
O2: (57.911,29.349,122.277)
C4': (53.456,27.815,124.137)
C2': (55.101,29.513,124.008)
O2': (55.695,29.413,125.287)
N1: (55.835,28.530,121.753)
N3: (57.398,29.190,120.076)
N4: (56.849,29.007,117.865)
C6: (54.913,28.231,120.786)
C5: (55.202,28.380,119.484)
O3': (52.998,29.941,125.194)
C2: (56.739,32.405,117.390)
OP1: (49.998,31.345,113.019)
OP2: (49.181,31.819,115.406)
C4: (56.226,32.459,119.664)
O5': (51.526,32.321,114.722)
C3': (53.694,30.567,114.101)
C1': (55.139,31.450,115.743)
O4': (54.560,32.553,115.096)
C5': (52.516,32.852,113.838)
P: (50.016,32.191,114.237)
O2: (57.515,32.628,116.439)
C4': (53.806,32.081,113.951)
C2': (54.110,30.339,115.554)
O2': (54.696,29.069,115.772)
N1: (55.473,31.833,117.133)
N3: (57.083,32.700,118.667)
N4: (56.625,32.742,120.906)
C6: (54.591,31.623,118.163)
C5: (54.924,31.912,119.430)
O3': (54.619,29.936,113.228)
OP1: (49.998,31.345,113.019)
OP2: (49.181,31.819,115.406)
C4: (56.226,32.459,119.664)
O5': (51.526,32.321,114.722)
C3': (53.694,30.567,114.101)
C1': (55.139,31.450,115.743)
O4': (54.560,32.553,115.096)
C5': (52.516,32.852,113.838)
P: (50.016,32.191,114.237)
O2: (57.515,32.628,116.439)
C4': (53.806,32.081,113.951)
C2': (54.110,30.339,115.554)
O2': (54.696,29.069,115.772)
N1: (55.473,31.833,117.133)
N3: (57.083,32.700,118.667)
N4: (56.625,32.742,120.906)
C6: (54.591,31.623,118.163)
C5: (54.924,31.912,119.430)
O3': (54.619,29.936,113.228)
Image (generated by PyMOL):