Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:963:9112
Extra
PDB:
ATOM 1 O3' C A 62 50.542 24.682 120.685 1.00 89.38 O
ATOM 2 P C A 63 50.431 26.266 120.959 1.00 89.32 P
ATOM 3 OP1 C A 63 49.337 26.482 121.940 1.00 89.21 O
ATOM 4 OP2 C A 63 50.387 26.960 119.647 1.00 89.61 O
ATOM 5 O5' C A 63 51.805 26.646 121.670 1.00 88.39 O
ATOM 6 C5' C A 63 52.096 26.200 123.004 1.00 87.52 C
ATOM 7 C4' C A 63 53.424 26.753 123.459 1.00 87.40 C
ATOM 8 O4' C A 63 54.470 26.282 122.576 1.00 86.33 O
ATOM 9 C3' C A 63 53.557 28.266 123.406 1.00 87.94 C
ATOM 10 O3' C A 63 52.993 28.847 124.581 1.00 90.22 O
ATOM 11 C2' C A 63 55.070 28.461 123.346 1.00 86.63 C
ATOM 12 O2' C A 63 55.675 28.369 124.620 1.00 86.28 O
ATOM 13 C1' C A 63 55.507 27.246 122.522 1.00 86.02 C
ATOM 14 N1 C A 63 55.888 27.479 121.109 1.00 85.81 N
ATOM 15 C2 C A 63 57.168 27.999 120.827 1.00 84.98 C
ATOM 16 O2 C A 63 57.923 28.302 121.765 1.00 84.51 O
ATOM 17 N3 C A 63 57.545 28.157 119.537 1.00 84.12 N
ATOM 18 C4 C A 63 56.710 27.827 118.549 1.00 83.73 C
ATOM 19 N4 C A 63 57.142 27.973 117.293 1.00 82.82 N
ATOM 20 C5 C A 63 55.399 27.325 118.805 1.00 83.98 C
ATOM 21 C6 C A 63 55.031 27.173 120.086 1.00 85.33 C
ATOM 22 P A A 64 52.189 30.236 124.489 1.00 91.80 P
ATOM 23 OP1 A A 64 51.720 30.573 125.860 1.00 91.46 O
ATOM 24 OP2 A A 64 51.202 30.130 123.382 1.00 92.05 O
ATOM 25 O5' A A 64 53.300 31.302 124.081 1.00 93.07 O
TER
ATOM 1 O3' U B 111 49.675 32.961 113.404 1.00 70.83 O
ATOM 2 P C B 112 50.081 31.476 113.853 1.00 71.86 P
ATOM 3 OP1 C B 112 50.057 30.636 112.627 1.00 71.59 O
ATOM 4 OP2 C B 112 49.230 31.109 115.018 1.00 72.09 O
ATOM 5 O5' C B 112 51.590 31.603 114.358 1.00 71.10 O
ATOM 6 C5' C B 112 52.602 32.158 113.499 1.00 71.69 C
ATOM 7 C4' C B 112 53.862 31.321 113.533 1.00 71.07 C
ATOM 8 O4' C B 112 54.686 31.699 114.670 1.00 71.31 O
ATOM 9 C3' C B 112 53.683 29.807 113.615 1.00 71.28 C
ATOM 10 O3' C B 112 54.586 29.180 112.718 1.00 70.72 O
ATOM 11 C2' C B 112 54.096 29.500 115.057 1.00 71.37 C
ATOM 12 O2' C B 112 54.587 28.186 115.237 1.00 71.74 O
ATOM 13 C1' C B 112 55.202 30.533 115.267 1.00 70.78 C
ATOM 14 N1 C B 112 55.589 30.843 116.662 1.00 71.09 N
ATOM 15 C2 C B 112 56.858 31.411 116.905 1.00 70.96 C
ATOM 16 O2 C B 112 57.606 31.670 115.947 1.00 69.86 O
ATOM 17 N3 C B 112 57.232 31.668 118.183 1.00 71.66 N
ATOM 18 C4 C B 112 56.399 31.394 119.193 1.00 70.86 C
ATOM 19 N4 C B 112 56.814 31.658 120.434 1.00 69.72 N
ATOM 20 C5 C B 112 55.105 30.838 118.975 1.00 70.96 C
ATOM 21 C6 C B 112 54.744 30.581 117.707 1.00 72.05 C
ATOM 22 P G B 113 54.012 28.413 111.430 1.00 72.23 P
ATOM 23 OP1 G B 113 52.957 27.472 111.899 1.00 72.97 O
ATOM 24 OP2 G B 113 55.151 27.902 110.627 1.00 69.88 O
ATOM 25 O5' G B 113 53.293 29.560 110.592 1.00 72.01 O
TER
ATOM 2 P C A 63 50.431 26.266 120.959 1.00 89.32 P
ATOM 3 OP1 C A 63 49.337 26.482 121.940 1.00 89.21 O
ATOM 4 OP2 C A 63 50.387 26.960 119.647 1.00 89.61 O
ATOM 5 O5' C A 63 51.805 26.646 121.670 1.00 88.39 O
ATOM 6 C5' C A 63 52.096 26.200 123.004 1.00 87.52 C
ATOM 7 C4' C A 63 53.424 26.753 123.459 1.00 87.40 C
ATOM 8 O4' C A 63 54.470 26.282 122.576 1.00 86.33 O
ATOM 9 C3' C A 63 53.557 28.266 123.406 1.00 87.94 C
ATOM 10 O3' C A 63 52.993 28.847 124.581 1.00 90.22 O
ATOM 11 C2' C A 63 55.070 28.461 123.346 1.00 86.63 C
ATOM 12 O2' C A 63 55.675 28.369 124.620 1.00 86.28 O
ATOM 13 C1' C A 63 55.507 27.246 122.522 1.00 86.02 C
ATOM 14 N1 C A 63 55.888 27.479 121.109 1.00 85.81 N
ATOM 15 C2 C A 63 57.168 27.999 120.827 1.00 84.98 C
ATOM 16 O2 C A 63 57.923 28.302 121.765 1.00 84.51 O
ATOM 17 N3 C A 63 57.545 28.157 119.537 1.00 84.12 N
ATOM 18 C4 C A 63 56.710 27.827 118.549 1.00 83.73 C
ATOM 19 N4 C A 63 57.142 27.973 117.293 1.00 82.82 N
ATOM 20 C5 C A 63 55.399 27.325 118.805 1.00 83.98 C
ATOM 21 C6 C A 63 55.031 27.173 120.086 1.00 85.33 C
ATOM 22 P A A 64 52.189 30.236 124.489 1.00 91.80 P
ATOM 23 OP1 A A 64 51.720 30.573 125.860 1.00 91.46 O
ATOM 24 OP2 A A 64 51.202 30.130 123.382 1.00 92.05 O
ATOM 25 O5' A A 64 53.300 31.302 124.081 1.00 93.07 O
TER
ATOM 1 O3' U B 111 49.675 32.961 113.404 1.00 70.83 O
ATOM 2 P C B 112 50.081 31.476 113.853 1.00 71.86 P
ATOM 3 OP1 C B 112 50.057 30.636 112.627 1.00 71.59 O
ATOM 4 OP2 C B 112 49.230 31.109 115.018 1.00 72.09 O
ATOM 5 O5' C B 112 51.590 31.603 114.358 1.00 71.10 O
ATOM 6 C5' C B 112 52.602 32.158 113.499 1.00 71.69 C
ATOM 7 C4' C B 112 53.862 31.321 113.533 1.00 71.07 C
ATOM 8 O4' C B 112 54.686 31.699 114.670 1.00 71.31 O
ATOM 9 C3' C B 112 53.683 29.807 113.615 1.00 71.28 C
ATOM 10 O3' C B 112 54.586 29.180 112.718 1.00 70.72 O
ATOM 11 C2' C B 112 54.096 29.500 115.057 1.00 71.37 C
ATOM 12 O2' C B 112 54.587 28.186 115.237 1.00 71.74 O
ATOM 13 C1' C B 112 55.202 30.533 115.267 1.00 70.78 C
ATOM 14 N1 C B 112 55.589 30.843 116.662 1.00 71.09 N
ATOM 15 C2 C B 112 56.858 31.411 116.905 1.00 70.96 C
ATOM 16 O2 C B 112 57.606 31.670 115.947 1.00 69.86 O
ATOM 17 N3 C B 112 57.232 31.668 118.183 1.00 71.66 N
ATOM 18 C4 C B 112 56.399 31.394 119.193 1.00 70.86 C
ATOM 19 N4 C B 112 56.814 31.658 120.434 1.00 69.72 N
ATOM 20 C5 C B 112 55.105 30.838 118.975 1.00 70.96 C
ATOM 21 C6 C B 112 54.744 30.581 117.707 1.00 72.05 C
ATOM 22 P G B 113 54.012 28.413 111.430 1.00 72.23 P
ATOM 23 OP1 G B 113 52.957 27.472 111.899 1.00 72.97 O
ATOM 24 OP2 G B 113 55.151 27.902 110.627 1.00 69.88 O
ATOM 25 O5' G B 113 53.293 29.560 110.592 1.00 72.01 O
TER
Atoms:
C2: (57.168,27.999,120.827)
OP1: (49.337,26.482,121.940)
OP2: (50.387,26.960,119.647)
C4: (56.710,27.827,118.549)
O5': (51.805,26.646,121.670)
C3': (53.557,28.266,123.406)
C1': (55.507,27.246,122.522)
O4': (54.470,26.282,122.576)
C5': (52.096,26.200,123.004)
P: (50.431,26.266,120.959)
O2: (57.923,28.302,121.765)
C4': (53.424,26.753,123.459)
C2': (55.070,28.461,123.346)
O2': (55.675,28.369,124.620)
N1: (55.888,27.479,121.109)
N3: (57.545,28.157,119.537)
N4: (57.142,27.973,117.293)
C6: (55.031,27.173,120.086)
C5: (55.399,27.325,118.805)
O3': (52.993,28.847,124.581)
OP1: (49.337,26.482,121.940)
OP2: (50.387,26.960,119.647)
C4: (56.710,27.827,118.549)
O5': (51.805,26.646,121.670)
C3': (53.557,28.266,123.406)
C1': (55.507,27.246,122.522)
O4': (54.470,26.282,122.576)
C5': (52.096,26.200,123.004)
P: (50.431,26.266,120.959)
O2: (57.923,28.302,121.765)
C4': (53.424,26.753,123.459)
C2': (55.070,28.461,123.346)
O2': (55.675,28.369,124.620)
N1: (55.888,27.479,121.109)
N3: (57.545,28.157,119.537)
N4: (57.142,27.973,117.293)
C6: (55.031,27.173,120.086)
C5: (55.399,27.325,118.805)
O3': (52.993,28.847,124.581)
C2: (56.858,31.411,116.905)
OP1: (50.057,30.636,112.627)
OP2: (49.230,31.109,115.018)
C4: (56.399,31.394,119.193)
O5': (51.590,31.603,114.358)
C3': (53.683,29.807,113.615)
C1': (55.202,30.533,115.267)
O4': (54.686,31.699,114.670)
C5': (52.602,32.158,113.499)
P: (50.081,31.476,113.853)
O2: (57.606,31.670,115.947)
C4': (53.862,31.321,113.533)
C2': (54.096,29.500,115.057)
O2': (54.587,28.186,115.237)
N1: (55.589,30.843,116.662)
N3: (57.232,31.668,118.183)
N4: (56.814,31.658,120.434)
C6: (54.744,30.581,117.707)
C5: (55.105,30.838,118.975)
O3': (54.586,29.180,112.718)
OP1: (50.057,30.636,112.627)
OP2: (49.230,31.109,115.018)
C4: (56.399,31.394,119.193)
O5': (51.590,31.603,114.358)
C3': (53.683,29.807,113.615)
C1': (55.202,30.533,115.267)
O4': (54.686,31.699,114.670)
C5': (52.602,32.158,113.499)
P: (50.081,31.476,113.853)
O2: (57.606,31.670,115.947)
C4': (53.862,31.321,113.533)
C2': (54.096,29.500,115.057)
O2': (54.587,28.186,115.237)
N1: (55.589,30.843,116.662)
N3: (57.232,31.668,118.183)
N4: (56.814,31.658,120.434)
C6: (54.744,30.581,117.707)
C5: (55.105,30.838,118.975)
O3': (54.586,29.180,112.718)
Image (generated by PyMOL):