Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:963:9112
Extra
PDB:
ATOM 1 O3' C A 62 50.720 25.881 121.211 1.00 65.38 O
ATOM 2 P C A 63 50.719 27.474 121.439 1.00 65.03 P
ATOM 3 OP1 C A 63 49.663 27.775 122.437 1.00 66.06 O
ATOM 4 OP2 C A 63 50.690 28.155 120.117 1.00 65.42 O
ATOM 5 O5' C A 63 52.127 27.762 122.118 1.00 64.07 O
ATOM 6 C5' C A 63 52.385 27.358 123.467 1.00 63.30 C
ATOM 7 C4' C A 63 53.709 27.904 123.926 1.00 64.33 C
ATOM 8 O4' C A 63 54.748 27.406 123.049 1.00 65.30 O
ATOM 9 C3' C A 63 53.865 29.412 123.853 1.00 65.97 C
ATOM 10 O3' C A 63 53.295 30.035 125.004 1.00 69.04 O
ATOM 11 C2' C A 63 55.381 29.574 123.806 1.00 65.54 C
ATOM 12 O2' C A 63 55.981 29.448 125.077 1.00 65.29 O
ATOM 13 C1' C A 63 55.793 28.361 122.968 1.00 65.85 C
ATOM 14 N1 C A 63 56.102 28.629 121.546 1.00 67.01 N
ATOM 15 C2 C A 63 57.387 29.101 121.211 1.00 66.53 C
ATOM 16 O2 C A 63 58.209 29.313 122.117 1.00 65.55 O
ATOM 17 N3 C A 63 57.694 29.315 119.909 1.00 66.04 N
ATOM 18 C4 C A 63 56.784 29.085 118.960 1.00 65.13 C
ATOM 19 N4 C A 63 57.140 29.295 117.691 1.00 64.15 N
ATOM 20 C5 C A 63 55.468 28.625 119.271 1.00 65.67 C
ATOM 21 C6 C A 63 55.172 28.413 120.563 1.00 66.68 C
ATOM 22 P A A 64 52.527 31.443 124.862 1.00 71.16 P
ATOM 23 OP1 A A 64 52.128 31.888 126.225 1.00 70.10 O
ATOM 24 OP2 A A 64 51.489 31.301 123.805 1.00 69.87 O
ATOM 25 O5' A A 64 53.647 32.446 124.329 1.00 73.00 O
TER
ATOM 1 O3' U B 111 49.764 33.889 113.736 1.00 58.55 O
ATOM 2 P C B 112 50.226 32.414 114.156 1.00 58.24 P
ATOM 3 OP1 C B 112 50.118 31.549 112.956 1.00 57.76 O
ATOM 4 OP2 C B 112 49.499 32.041 115.398 1.00 60.38 O
ATOM 5 O5' C B 112 51.765 32.569 114.532 1.00 57.03 O
ATOM 6 C5' C B 112 52.713 32.995 113.551 1.00 56.85 C
ATOM 7 C4' C B 112 53.991 32.207 113.672 1.00 56.14 C
ATOM 8 O4' C B 112 54.766 32.686 114.805 1.00 57.65 O
ATOM 9 C3' C B 112 53.829 30.704 113.873 1.00 57.03 C
ATOM 10 O3' C B 112 54.765 30.028 113.061 1.00 57.50 O
ATOM 11 C2' C B 112 54.210 30.509 115.338 1.00 57.90 C
ATOM 12 O2' C B 112 54.742 29.226 115.618 1.00 58.70 O
ATOM 13 C1' C B 112 55.286 31.576 115.496 1.00 57.10 C
ATOM 14 N1 C B 112 55.618 31.973 116.879 1.00 56.93 N
ATOM 15 C2 C B 112 56.893 32.513 117.134 1.00 57.19 C
ATOM 16 O2 C B 112 57.676 32.691 116.182 1.00 56.95 O
ATOM 17 N3 C B 112 57.237 32.827 118.408 1.00 56.76 N
ATOM 18 C4 C B 112 56.368 32.628 119.404 1.00 55.41 C
ATOM 19 N4 C B 112 56.760 32.934 120.642 1.00 54.23 N
ATOM 20 C5 C B 112 55.059 32.103 119.173 1.00 55.49 C
ATOM 21 C6 C B 112 54.727 31.800 117.907 1.00 56.33 C
ATOM 22 P G B 113 54.253 29.269 111.752 1.00 59.14 P
ATOM 23 OP1 G B 113 53.338 28.176 112.174 1.00 58.75 O
ATOM 24 OP2 G B 113 55.438 28.961 110.907 1.00 59.24 O
ATOM 25 O5' G B 113 53.382 30.381 111.024 1.00 59.57 O
TER
ATOM 2 P C A 63 50.719 27.474 121.439 1.00 65.03 P
ATOM 3 OP1 C A 63 49.663 27.775 122.437 1.00 66.06 O
ATOM 4 OP2 C A 63 50.690 28.155 120.117 1.00 65.42 O
ATOM 5 O5' C A 63 52.127 27.762 122.118 1.00 64.07 O
ATOM 6 C5' C A 63 52.385 27.358 123.467 1.00 63.30 C
ATOM 7 C4' C A 63 53.709 27.904 123.926 1.00 64.33 C
ATOM 8 O4' C A 63 54.748 27.406 123.049 1.00 65.30 O
ATOM 9 C3' C A 63 53.865 29.412 123.853 1.00 65.97 C
ATOM 10 O3' C A 63 53.295 30.035 125.004 1.00 69.04 O
ATOM 11 C2' C A 63 55.381 29.574 123.806 1.00 65.54 C
ATOM 12 O2' C A 63 55.981 29.448 125.077 1.00 65.29 O
ATOM 13 C1' C A 63 55.793 28.361 122.968 1.00 65.85 C
ATOM 14 N1 C A 63 56.102 28.629 121.546 1.00 67.01 N
ATOM 15 C2 C A 63 57.387 29.101 121.211 1.00 66.53 C
ATOM 16 O2 C A 63 58.209 29.313 122.117 1.00 65.55 O
ATOM 17 N3 C A 63 57.694 29.315 119.909 1.00 66.04 N
ATOM 18 C4 C A 63 56.784 29.085 118.960 1.00 65.13 C
ATOM 19 N4 C A 63 57.140 29.295 117.691 1.00 64.15 N
ATOM 20 C5 C A 63 55.468 28.625 119.271 1.00 65.67 C
ATOM 21 C6 C A 63 55.172 28.413 120.563 1.00 66.68 C
ATOM 22 P A A 64 52.527 31.443 124.862 1.00 71.16 P
ATOM 23 OP1 A A 64 52.128 31.888 126.225 1.00 70.10 O
ATOM 24 OP2 A A 64 51.489 31.301 123.805 1.00 69.87 O
ATOM 25 O5' A A 64 53.647 32.446 124.329 1.00 73.00 O
TER
ATOM 1 O3' U B 111 49.764 33.889 113.736 1.00 58.55 O
ATOM 2 P C B 112 50.226 32.414 114.156 1.00 58.24 P
ATOM 3 OP1 C B 112 50.118 31.549 112.956 1.00 57.76 O
ATOM 4 OP2 C B 112 49.499 32.041 115.398 1.00 60.38 O
ATOM 5 O5' C B 112 51.765 32.569 114.532 1.00 57.03 O
ATOM 6 C5' C B 112 52.713 32.995 113.551 1.00 56.85 C
ATOM 7 C4' C B 112 53.991 32.207 113.672 1.00 56.14 C
ATOM 8 O4' C B 112 54.766 32.686 114.805 1.00 57.65 O
ATOM 9 C3' C B 112 53.829 30.704 113.873 1.00 57.03 C
ATOM 10 O3' C B 112 54.765 30.028 113.061 1.00 57.50 O
ATOM 11 C2' C B 112 54.210 30.509 115.338 1.00 57.90 C
ATOM 12 O2' C B 112 54.742 29.226 115.618 1.00 58.70 O
ATOM 13 C1' C B 112 55.286 31.576 115.496 1.00 57.10 C
ATOM 14 N1 C B 112 55.618 31.973 116.879 1.00 56.93 N
ATOM 15 C2 C B 112 56.893 32.513 117.134 1.00 57.19 C
ATOM 16 O2 C B 112 57.676 32.691 116.182 1.00 56.95 O
ATOM 17 N3 C B 112 57.237 32.827 118.408 1.00 56.76 N
ATOM 18 C4 C B 112 56.368 32.628 119.404 1.00 55.41 C
ATOM 19 N4 C B 112 56.760 32.934 120.642 1.00 54.23 N
ATOM 20 C5 C B 112 55.059 32.103 119.173 1.00 55.49 C
ATOM 21 C6 C B 112 54.727 31.800 117.907 1.00 56.33 C
ATOM 22 P G B 113 54.253 29.269 111.752 1.00 59.14 P
ATOM 23 OP1 G B 113 53.338 28.176 112.174 1.00 58.75 O
ATOM 24 OP2 G B 113 55.438 28.961 110.907 1.00 59.24 O
ATOM 25 O5' G B 113 53.382 30.381 111.024 1.00 59.57 O
TER
Atoms:
C2: (57.387,29.101,121.211)
OP1: (49.663,27.775,122.437)
OP2: (50.690,28.155,120.117)
C4: (56.784,29.085,118.960)
O5': (52.127,27.762,122.118)
C3': (53.865,29.412,123.853)
C1': (55.793,28.361,122.968)
O4': (54.748,27.406,123.049)
C5': (52.385,27.358,123.467)
P: (50.719,27.474,121.439)
O2: (58.209,29.313,122.117)
C4': (53.709,27.904,123.926)
C2': (55.381,29.574,123.806)
O2': (55.981,29.448,125.077)
N1: (56.102,28.629,121.546)
N3: (57.694,29.315,119.909)
N4: (57.140,29.295,117.691)
C6: (55.172,28.413,120.563)
C5: (55.468,28.625,119.271)
O3': (53.295,30.035,125.004)
OP1: (49.663,27.775,122.437)
OP2: (50.690,28.155,120.117)
C4: (56.784,29.085,118.960)
O5': (52.127,27.762,122.118)
C3': (53.865,29.412,123.853)
C1': (55.793,28.361,122.968)
O4': (54.748,27.406,123.049)
C5': (52.385,27.358,123.467)
P: (50.719,27.474,121.439)
O2: (58.209,29.313,122.117)
C4': (53.709,27.904,123.926)
C2': (55.381,29.574,123.806)
O2': (55.981,29.448,125.077)
N1: (56.102,28.629,121.546)
N3: (57.694,29.315,119.909)
N4: (57.140,29.295,117.691)
C6: (55.172,28.413,120.563)
C5: (55.468,28.625,119.271)
O3': (53.295,30.035,125.004)
C2: (56.893,32.513,117.134)
OP1: (50.118,31.549,112.956)
OP2: (49.499,32.041,115.398)
C4: (56.368,32.628,119.404)
O5': (51.765,32.569,114.532)
C3': (53.829,30.704,113.873)
C1': (55.286,31.576,115.496)
O4': (54.766,32.686,114.805)
C5': (52.713,32.995,113.551)
P: (50.226,32.414,114.156)
O2: (57.676,32.691,116.182)
C4': (53.991,32.207,113.672)
C2': (54.210,30.509,115.338)
O2': (54.742,29.226,115.618)
N1: (55.618,31.973,116.879)
N3: (57.237,32.827,118.408)
N4: (56.760,32.934,120.642)
C6: (54.727,31.800,117.907)
C5: (55.059,32.103,119.173)
O3': (54.765,30.028,113.061)
OP1: (50.118,31.549,112.956)
OP2: (49.499,32.041,115.398)
C4: (56.368,32.628,119.404)
O5': (51.765,32.569,114.532)
C3': (53.829,30.704,113.873)
C1': (55.286,31.576,115.496)
O4': (54.766,32.686,114.805)
C5': (52.713,32.995,113.551)
P: (50.226,32.414,114.156)
O2: (57.676,32.691,116.182)
C4': (53.991,32.207,113.672)
C2': (54.210,30.509,115.338)
O2': (54.742,29.226,115.618)
N1: (55.618,31.973,116.879)
N3: (57.237,32.827,118.408)
N4: (56.760,32.934,120.642)
C6: (54.727,31.800,117.907)
C5: (55.059,32.103,119.173)
O3': (54.765,30.028,113.061)
Image (generated by PyMOL):