Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0118:0129
Extra
PDB:
ATOM 1 O3' A A 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 2 P C A 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C A 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C A 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C A 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C A 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C A 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C A 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C A 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C A 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C A 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C A 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C A 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C A 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C A 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C A 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C A 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C A 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C A 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C A 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C A 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A A 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A A 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A A 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A A 119 87.078 147.287 26.686 1.00 45.01 O
TER
ATOM 1 O3' G B 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 2 P C B 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C B 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C B 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C B 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C B 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C B 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C B 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C B 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C B 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C B 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C B 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C B 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C B 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C B 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C B 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C B 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C B 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C B 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C B 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
TER
ATOM 2 P C A 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C A 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C A 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C A 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C A 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C A 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C A 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C A 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C A 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C A 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C A 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C A 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C A 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C A 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C A 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C A 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C A 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C A 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C A 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C A 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A A 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A A 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A A 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A A 119 87.078 147.287 26.686 1.00 45.01 O
TER
ATOM 1 O3' G B 128 93.408 149.066 15.972 1.00 55.57 O
ATOM 2 P C B 129 92.815 148.379 17.291 1.00 54.32 P
ATOM 3 OP1 C B 129 93.517 148.951 18.469 1.00 52.58 O
ATOM 4 OP2 C B 129 92.833 146.905 17.065 1.00 55.34 O
ATOM 5 O5' C B 129 91.308 148.895 17.317 1.00 52.80 O
ATOM 6 C5' C B 129 90.321 148.214 18.084 1.00 50.46 C
ATOM 7 C4' C B 129 89.148 147.858 17.214 1.00 51.45 C
ATOM 8 O4' C B 129 88.638 146.569 17.631 1.00 52.82 O
ATOM 9 C3' C B 129 87.962 148.814 17.233 1.00 50.51 C
ATOM 10 O3' C B 129 87.286 148.690 15.981 1.00 52.57 O
ATOM 11 C2' C B 129 87.092 148.198 18.331 1.00 50.95 C
ATOM 12 O2' C B 129 85.724 148.530 18.217 1.00 47.49 O
ATOM 13 C1' C B 129 87.300 146.703 18.065 1.00 52.30 C
ATOM 14 N1 C B 129 87.107 145.767 19.192 1.00 53.51 N
ATOM 15 C2 C B 129 87.487 144.424 19.012 1.00 55.31 C
ATOM 16 O2 C B 129 87.941 144.063 17.907 1.00 56.81 O
ATOM 17 N3 C B 129 87.352 143.556 20.039 1.00 54.01 N
ATOM 18 C4 C B 129 86.856 143.972 21.201 1.00 52.24 C
ATOM 19 N4 C B 129 86.761 143.082 22.188 1.00 52.59 N
ATOM 20 C5 C B 129 86.441 145.321 21.405 1.00 52.37 C
ATOM 21 C6 C B 129 86.584 146.176 20.386 1.00 52.87 C
ATOM 22 P G B 130 87.112 149.962 15.009 1.00 53.92 P
ATOM 23 OP1 G B 130 88.378 150.112 14.235 1.00 51.70 O
ATOM 24 OP2 G B 130 86.568 151.115 15.782 1.00 52.21 O
ATOM 25 O5' G B 130 85.975 149.478 14.005 1.00 50.94 O
TER
Atoms:
C2: (83.034,144.306,21.325)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
C2: (87.487,144.424,19.012)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
OP1: (93.517,148.951,18.469)
OP2: (92.833,146.905,17.065)
C4: (86.856,143.972,21.201)
O5': (91.308,148.895,17.317)
C3': (87.962,148.814,17.233)
C1': (87.300,146.703,18.065)
O4': (88.638,146.569,17.631)
C5': (90.321,148.214,18.084)
P: (92.815,148.379,17.291)
O2: (87.941,144.063,17.907)
C4': (89.148,147.858,17.214)
C2': (87.092,148.198,18.331)
O2': (85.724,148.530,18.217)
N1: (87.107,145.767,19.192)
N3: (87.352,143.556,20.039)
N4: (86.761,143.082,22.188)
C6: (86.584,146.176,20.386)
C5: (86.441,145.321,21.405)
O3': (87.286,148.690,15.981)
Image (generated by PyMOL):