Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01063:01064
Extra
PDB:
ATOM 1 O3' C A1062 17.725 115.021 122.026 1.00 38.71 O
ATOM 2 P C A1063 17.704 114.787 120.444 1.00 39.97 P
ATOM 3 OP1 C A1063 16.652 115.676 119.890 1.00 41.94 O
ATOM 4 OP2 C A1063 17.643 113.330 120.181 1.00 38.98 O
ATOM 5 O5' C A1063 19.124 115.327 119.976 1.00 38.03 O
ATOM 6 C5' C A1063 19.450 116.713 120.120 1.00 37.21 C
ATOM 7 C4' C A1063 20.870 116.977 119.684 1.00 38.13 C
ATOM 8 O4' C A1063 21.814 116.365 120.604 1.00 38.15 O
ATOM 9 C3' C A1063 21.299 116.426 118.337 1.00 37.09 C
ATOM 10 O3' C A1063 20.813 117.208 117.261 1.00 37.02 O
ATOM 11 C2' C A1063 22.812 116.507 118.461 1.00 37.28 C
ATOM 12 O2' C A1063 23.270 117.842 118.348 1.00 38.45 O
ATOM 13 C1' C A1063 23.010 116.049 119.906 1.00 36.61 C
ATOM 14 N1 C A1063 23.251 114.598 120.006 1.00 36.25 N
ATOM 15 C2 C A1063 24.559 114.113 119.837 1.00 35.14 C
ATOM 16 O2 C A1063 25.476 114.913 119.612 1.00 36.00 O
ATOM 17 N3 C A1063 24.784 112.789 119.920 1.00 33.37 N
ATOM 18 C4 C A1063 23.772 111.955 120.155 1.00 33.99 C
ATOM 19 N4 C A1063 24.041 110.657 120.213 1.00 35.24 N
ATOM 20 C5 C A1063 22.438 112.416 120.335 1.00 34.71 C
ATOM 21 C6 C A1063 22.223 113.731 120.255 1.00 34.96 C
ATOM 22 P C A1064 20.525 116.514 115.841 1.00 38.10 P
ATOM 23 OP1 C A1064 21.812 116.052 115.257 1.00 38.94 O
ATOM 24 OP2 C A1064 19.666 117.462 115.087 1.00 38.90 O
ATOM 25 O5' C A1064 19.673 115.216 116.177 1.00 36.09 O
TER
ATOM 1 O3' C B1063 20.813 117.208 117.261 1.00 37.02 O
ATOM 2 P C B1064 20.525 116.514 115.841 1.00 38.10 P
ATOM 3 OP1 C B1064 21.812 116.052 115.257 1.00 38.94 O
ATOM 4 OP2 C B1064 19.666 117.462 115.087 1.00 38.90 O
ATOM 5 O5' C B1064 19.673 115.216 116.177 1.00 36.09 O
ATOM 6 C5' C B1064 18.948 114.530 115.148 1.00 36.76 C
ATOM 7 C4' C B1064 18.593 113.129 115.596 1.00 39.51 C
ATOM 8 O4' C B1064 19.731 112.240 115.431 1.00 38.75 O
ATOM 9 C3' C B1064 18.144 112.997 117.048 1.00 39.97 C
ATOM 10 O3' C B1064 17.160 111.979 117.137 1.00 39.79 O
ATOM 11 C2' C B1064 19.433 112.571 117.746 1.00 39.69 C
ATOM 12 O2' C B1064 19.228 111.856 118.944 1.00 38.02 O
ATOM 13 C1' C B1064 20.082 111.683 116.681 1.00 39.54 C
ATOM 14 N1 C B1064 21.551 111.665 116.763 1.00 39.77 N
ATOM 15 C2 C B1064 22.219 110.433 116.866 1.00 40.01 C
ATOM 16 O2 C B1064 21.559 109.380 116.883 1.00 38.77 O
ATOM 17 N3 C B1064 23.567 110.423 116.943 1.00 40.12 N
ATOM 18 C4 C B1064 24.246 111.572 116.920 1.00 39.59 C
ATOM 19 N4 C B1064 25.574 111.512 116.996 1.00 40.33 N
ATOM 20 C5 C B1064 23.594 112.834 116.818 1.00 40.08 C
ATOM 21 C6 C B1064 22.262 112.835 116.740 1.00 39.56 C
ATOM 22 P A B1065 15.639 112.306 116.739 1.00 39.22 P
ATOM 23 OP1 A B1065 15.611 113.642 116.093 1.00 35.44 O
ATOM 24 OP2 A B1065 14.791 112.053 117.931 1.00 40.25 O
ATOM 25 O5' A B1065 15.327 111.186 115.652 1.00 35.32 O
TER
ATOM 2 P C A1063 17.704 114.787 120.444 1.00 39.97 P
ATOM 3 OP1 C A1063 16.652 115.676 119.890 1.00 41.94 O
ATOM 4 OP2 C A1063 17.643 113.330 120.181 1.00 38.98 O
ATOM 5 O5' C A1063 19.124 115.327 119.976 1.00 38.03 O
ATOM 6 C5' C A1063 19.450 116.713 120.120 1.00 37.21 C
ATOM 7 C4' C A1063 20.870 116.977 119.684 1.00 38.13 C
ATOM 8 O4' C A1063 21.814 116.365 120.604 1.00 38.15 O
ATOM 9 C3' C A1063 21.299 116.426 118.337 1.00 37.09 C
ATOM 10 O3' C A1063 20.813 117.208 117.261 1.00 37.02 O
ATOM 11 C2' C A1063 22.812 116.507 118.461 1.00 37.28 C
ATOM 12 O2' C A1063 23.270 117.842 118.348 1.00 38.45 O
ATOM 13 C1' C A1063 23.010 116.049 119.906 1.00 36.61 C
ATOM 14 N1 C A1063 23.251 114.598 120.006 1.00 36.25 N
ATOM 15 C2 C A1063 24.559 114.113 119.837 1.00 35.14 C
ATOM 16 O2 C A1063 25.476 114.913 119.612 1.00 36.00 O
ATOM 17 N3 C A1063 24.784 112.789 119.920 1.00 33.37 N
ATOM 18 C4 C A1063 23.772 111.955 120.155 1.00 33.99 C
ATOM 19 N4 C A1063 24.041 110.657 120.213 1.00 35.24 N
ATOM 20 C5 C A1063 22.438 112.416 120.335 1.00 34.71 C
ATOM 21 C6 C A1063 22.223 113.731 120.255 1.00 34.96 C
ATOM 22 P C A1064 20.525 116.514 115.841 1.00 38.10 P
ATOM 23 OP1 C A1064 21.812 116.052 115.257 1.00 38.94 O
ATOM 24 OP2 C A1064 19.666 117.462 115.087 1.00 38.90 O
ATOM 25 O5' C A1064 19.673 115.216 116.177 1.00 36.09 O
TER
ATOM 1 O3' C B1063 20.813 117.208 117.261 1.00 37.02 O
ATOM 2 P C B1064 20.525 116.514 115.841 1.00 38.10 P
ATOM 3 OP1 C B1064 21.812 116.052 115.257 1.00 38.94 O
ATOM 4 OP2 C B1064 19.666 117.462 115.087 1.00 38.90 O
ATOM 5 O5' C B1064 19.673 115.216 116.177 1.00 36.09 O
ATOM 6 C5' C B1064 18.948 114.530 115.148 1.00 36.76 C
ATOM 7 C4' C B1064 18.593 113.129 115.596 1.00 39.51 C
ATOM 8 O4' C B1064 19.731 112.240 115.431 1.00 38.75 O
ATOM 9 C3' C B1064 18.144 112.997 117.048 1.00 39.97 C
ATOM 10 O3' C B1064 17.160 111.979 117.137 1.00 39.79 O
ATOM 11 C2' C B1064 19.433 112.571 117.746 1.00 39.69 C
ATOM 12 O2' C B1064 19.228 111.856 118.944 1.00 38.02 O
ATOM 13 C1' C B1064 20.082 111.683 116.681 1.00 39.54 C
ATOM 14 N1 C B1064 21.551 111.665 116.763 1.00 39.77 N
ATOM 15 C2 C B1064 22.219 110.433 116.866 1.00 40.01 C
ATOM 16 O2 C B1064 21.559 109.380 116.883 1.00 38.77 O
ATOM 17 N3 C B1064 23.567 110.423 116.943 1.00 40.12 N
ATOM 18 C4 C B1064 24.246 111.572 116.920 1.00 39.59 C
ATOM 19 N4 C B1064 25.574 111.512 116.996 1.00 40.33 N
ATOM 20 C5 C B1064 23.594 112.834 116.818 1.00 40.08 C
ATOM 21 C6 C B1064 22.262 112.835 116.740 1.00 39.56 C
ATOM 22 P A B1065 15.639 112.306 116.739 1.00 39.22 P
ATOM 23 OP1 A B1065 15.611 113.642 116.093 1.00 35.44 O
ATOM 24 OP2 A B1065 14.791 112.053 117.931 1.00 40.25 O
ATOM 25 O5' A B1065 15.327 111.186 115.652 1.00 35.32 O
TER
Atoms:
C2: (24.559,114.113,119.837)
OP1: (16.652,115.676,119.890)
OP2: (17.643,113.330,120.181)
C4: (23.772,111.955,120.155)
O5': (19.124,115.327,119.976)
C3': (21.299,116.426,118.337)
C1': (23.010,116.049,119.906)
O4': (21.814,116.365,120.604)
C5': (19.450,116.713,120.120)
P: (17.704,114.787,120.444)
O2: (25.476,114.913,119.612)
C4': (20.870,116.977,119.684)
C2': (22.812,116.507,118.461)
O2': (23.270,117.842,118.348)
N1: (23.251,114.598,120.006)
N3: (24.784,112.789,119.920)
N4: (24.041,110.657,120.213)
C6: (22.223,113.731,120.255)
C5: (22.438,112.416,120.335)
O3': (20.813,117.208,117.261)
OP1: (16.652,115.676,119.890)
OP2: (17.643,113.330,120.181)
C4: (23.772,111.955,120.155)
O5': (19.124,115.327,119.976)
C3': (21.299,116.426,118.337)
C1': (23.010,116.049,119.906)
O4': (21.814,116.365,120.604)
C5': (19.450,116.713,120.120)
P: (17.704,114.787,120.444)
O2: (25.476,114.913,119.612)
C4': (20.870,116.977,119.684)
C2': (22.812,116.507,118.461)
O2': (23.270,117.842,118.348)
N1: (23.251,114.598,120.006)
N3: (24.784,112.789,119.920)
N4: (24.041,110.657,120.213)
C6: (22.223,113.731,120.255)
C5: (22.438,112.416,120.335)
O3': (20.813,117.208,117.261)
C2: (22.219,110.433,116.866)
OP1: (21.812,116.052,115.257)
OP2: (19.666,117.462,115.087)
C4: (24.246,111.572,116.920)
O5': (19.673,115.216,116.177)
C3': (18.144,112.997,117.048)
C1': (20.082,111.683,116.681)
O4': (19.731,112.240,115.431)
C5': (18.948,114.530,115.148)
P: (20.525,116.514,115.841)
O2: (21.559,109.380,116.883)
C4': (18.593,113.129,115.596)
C2': (19.433,112.571,117.746)
O2': (19.228,111.856,118.944)
N1: (21.551,111.665,116.763)
N3: (23.567,110.423,116.943)
N4: (25.574,111.512,116.996)
C6: (22.262,112.835,116.740)
C5: (23.594,112.834,116.818)
O3': (17.160,111.979,117.137)
OP1: (21.812,116.052,115.257)
OP2: (19.666,117.462,115.087)
C4: (24.246,111.572,116.920)
O5': (19.673,115.216,116.177)
C3': (18.144,112.997,117.048)
C1': (20.082,111.683,116.681)
O4': (19.731,112.240,115.431)
C5': (18.948,114.530,115.148)
P: (20.525,116.514,115.841)
O2: (21.559,109.380,116.883)
C4': (18.593,113.129,115.596)
C2': (19.433,112.571,117.746)
O2': (19.228,111.856,118.944)
N1: (21.551,111.665,116.763)
N3: (23.567,110.423,116.943)
N4: (25.574,111.512,116.996)
C6: (22.262,112.835,116.740)
C5: (23.594,112.834,116.818)
O3': (17.160,111.979,117.137)
Image (generated by PyMOL):