Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:963:9112
Extra
PDB:
ATOM 1 O3' C A 62 50.646 26.043 121.065 1.00 62.54 O
ATOM 2 P C A 63 50.697 27.643 121.257 1.00 63.54 P
ATOM 3 OP1 C A 63 49.673 28.022 122.258 1.00 64.25 O
ATOM 4 OP2 C A 63 50.684 28.291 119.917 1.00 63.43 O
ATOM 5 O5' C A 63 52.114 27.899 121.931 1.00 62.75 O
ATOM 6 C5' C A 63 52.384 27.428 123.258 1.00 62.76 C
ATOM 7 C4' C A 63 53.712 27.949 123.731 1.00 63.29 C
ATOM 8 O4' C A 63 54.758 27.432 122.875 1.00 63.53 O
ATOM 9 C3' C A 63 53.876 29.455 123.651 1.00 64.76 C
ATOM 10 O3' C A 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 11 C2' C A 63 55.391 29.616 123.592 1.00 64.16 C
ATOM 12 O2' C A 63 56.002 29.530 124.862 1.00 63.84 O
ATOM 13 C1' C A 63 55.795 28.391 122.768 1.00 64.14 C
ATOM 14 N1 C A 63 56.085 28.634 121.339 1.00 64.35 N
ATOM 15 C2 C A 63 57.340 29.153 120.988 1.00 63.99 C
ATOM 16 O2 C A 63 58.149 29.432 121.888 1.00 63.28 O
ATOM 17 N3 C A 63 57.639 29.339 119.677 1.00 64.08 N
ATOM 18 C4 C A 63 56.740 29.038 118.737 1.00 62.94 C
ATOM 19 N4 C A 63 57.086 29.219 117.460 1.00 61.38 N
ATOM 20 C5 C A 63 55.447 28.532 119.065 1.00 63.64 C
ATOM 21 C6 C A 63 55.163 28.348 120.366 1.00 64.39 C
ATOM 22 P A A 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 23 OP1 A A 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 24 OP2 A A 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 25 O5' A A 64 53.452 32.511 124.166 1.00 71.32 O
TER
ATOM 1 O3' U B 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 2 P C B 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 3 OP1 C B 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 4 OP2 C B 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 5 O5' C B 112 51.710 32.652 114.338 1.00 53.09 O
ATOM 6 C5' C B 112 52.672 33.143 113.406 1.00 52.60 C
ATOM 7 C4' C B 112 53.940 32.336 113.485 1.00 52.77 C
ATOM 8 O4' C B 112 54.741 32.771 114.619 1.00 53.86 O
ATOM 9 C3' C B 112 53.752 30.831 113.643 1.00 52.31 C
ATOM 10 O3' C B 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 11 C2' C B 112 54.101 30.602 115.109 1.00 52.92 C
ATOM 12 O2' C B 112 54.611 29.308 115.349 1.00 54.83 O
ATOM 13 C1' C B 112 55.205 31.634 115.304 1.00 53.38 C
ATOM 14 N1 C B 112 55.551 31.999 116.694 1.00 54.10 N
ATOM 15 C2 C B 112 56.841 32.509 116.952 1.00 54.54 C
ATOM 16 O2 C B 112 57.626 32.686 116.001 1.00 54.18 O
ATOM 17 N3 C B 112 57.197 32.797 118.230 1.00 53.33 N
ATOM 18 C4 C B 112 56.328 32.605 119.226 1.00 52.05 C
ATOM 19 N4 C B 112 56.732 32.885 120.464 1.00 50.12 N
ATOM 20 C5 C B 112 55.005 32.114 118.992 1.00 52.69 C
ATOM 21 C6 C B 112 54.660 31.831 117.723 1.00 53.56 C
ATOM 22 P G B 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 23 OP1 G B 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 24 OP2 G B 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 25 O5' G B 113 53.458 30.477 110.701 1.00 54.55 O
TER
ATOM 2 P C A 63 50.697 27.643 121.257 1.00 63.54 P
ATOM 3 OP1 C A 63 49.673 28.022 122.258 1.00 64.25 O
ATOM 4 OP2 C A 63 50.684 28.291 119.917 1.00 63.43 O
ATOM 5 O5' C A 63 52.114 27.899 121.931 1.00 62.75 O
ATOM 6 C5' C A 63 52.384 27.428 123.258 1.00 62.76 C
ATOM 7 C4' C A 63 53.712 27.949 123.731 1.00 63.29 C
ATOM 8 O4' C A 63 54.758 27.432 122.875 1.00 63.53 O
ATOM 9 C3' C A 63 53.876 29.455 123.651 1.00 64.76 C
ATOM 10 O3' C A 63 53.301 30.077 124.798 1.00 67.36 O
ATOM 11 C2' C A 63 55.391 29.616 123.592 1.00 64.16 C
ATOM 12 O2' C A 63 56.002 29.530 124.862 1.00 63.84 O
ATOM 13 C1' C A 63 55.795 28.391 122.768 1.00 64.14 C
ATOM 14 N1 C A 63 56.085 28.634 121.339 1.00 64.35 N
ATOM 15 C2 C A 63 57.340 29.153 120.988 1.00 63.99 C
ATOM 16 O2 C A 63 58.149 29.432 121.888 1.00 63.28 O
ATOM 17 N3 C A 63 57.639 29.339 119.677 1.00 64.08 N
ATOM 18 C4 C A 63 56.740 29.038 118.737 1.00 62.94 C
ATOM 19 N4 C A 63 57.086 29.219 117.460 1.00 61.38 N
ATOM 20 C5 C A 63 55.447 28.532 119.065 1.00 63.64 C
ATOM 21 C6 C A 63 55.163 28.348 120.366 1.00 64.39 C
ATOM 22 P A A 64 52.407 31.402 124.629 1.00 69.84 P
ATOM 23 OP1 A A 64 51.908 31.786 125.979 1.00 69.86 O
ATOM 24 OP2 A A 64 51.434 31.178 123.522 1.00 69.34 O
ATOM 25 O5' A A 64 53.452 32.511 124.166 1.00 71.32 O
TER
ATOM 1 O3' U B 111 49.766 34.017 113.515 1.00 55.42 O
ATOM 2 P C B 112 50.182 32.524 113.921 1.00 54.48 P
ATOM 3 OP1 C B 112 50.094 31.682 112.704 1.00 54.36 O
ATOM 4 OP2 C B 112 49.411 32.151 115.132 1.00 55.26 O
ATOM 5 O5' C B 112 51.710 32.652 114.338 1.00 53.09 O
ATOM 6 C5' C B 112 52.672 33.143 113.406 1.00 52.60 C
ATOM 7 C4' C B 112 53.940 32.336 113.485 1.00 52.77 C
ATOM 8 O4' C B 112 54.741 32.771 114.619 1.00 53.86 O
ATOM 9 C3' C B 112 53.752 30.831 113.643 1.00 52.31 C
ATOM 10 O3' C B 112 54.700 30.159 112.840 1.00 52.70 O
ATOM 11 C2' C B 112 54.101 30.602 115.109 1.00 52.92 C
ATOM 12 O2' C B 112 54.611 29.308 115.349 1.00 54.83 O
ATOM 13 C1' C B 112 55.205 31.634 115.304 1.00 53.38 C
ATOM 14 N1 C B 112 55.551 31.999 116.694 1.00 54.10 N
ATOM 15 C2 C B 112 56.841 32.509 116.952 1.00 54.54 C
ATOM 16 O2 C B 112 57.626 32.686 116.001 1.00 54.18 O
ATOM 17 N3 C B 112 57.197 32.797 118.230 1.00 53.33 N
ATOM 18 C4 C B 112 56.328 32.605 119.226 1.00 52.05 C
ATOM 19 N4 C B 112 56.732 32.885 120.464 1.00 50.12 N
ATOM 20 C5 C B 112 55.005 32.114 118.992 1.00 52.69 C
ATOM 21 C6 C B 112 54.660 31.831 117.723 1.00 53.56 C
ATOM 22 P G B 113 54.202 29.357 111.547 1.00 54.13 P
ATOM 23 OP1 G B 113 53.181 28.368 111.968 1.00 54.47 O
ATOM 24 OP2 G B 113 55.401 28.907 110.792 1.00 54.63 O
ATOM 25 O5' G B 113 53.458 30.477 110.701 1.00 54.55 O
TER
Atoms:
C2: (57.340,29.153,120.988)
OP1: (49.673,28.022,122.258)
OP2: (50.684,28.291,119.917)
C4: (56.740,29.038,118.737)
O5': (52.114,27.899,121.931)
C3': (53.876,29.455,123.651)
C1': (55.795,28.391,122.768)
O4': (54.758,27.432,122.875)
C5': (52.384,27.428,123.258)
P: (50.697,27.643,121.257)
O2: (58.149,29.432,121.888)
C4': (53.712,27.949,123.731)
C2': (55.391,29.616,123.592)
O2': (56.002,29.530,124.862)
N1: (56.085,28.634,121.339)
N3: (57.639,29.339,119.677)
N4: (57.086,29.219,117.460)
C6: (55.163,28.348,120.366)
C5: (55.447,28.532,119.065)
O3': (53.301,30.077,124.798)
OP1: (49.673,28.022,122.258)
OP2: (50.684,28.291,119.917)
C4: (56.740,29.038,118.737)
O5': (52.114,27.899,121.931)
C3': (53.876,29.455,123.651)
C1': (55.795,28.391,122.768)
O4': (54.758,27.432,122.875)
C5': (52.384,27.428,123.258)
P: (50.697,27.643,121.257)
O2: (58.149,29.432,121.888)
C4': (53.712,27.949,123.731)
C2': (55.391,29.616,123.592)
O2': (56.002,29.530,124.862)
N1: (56.085,28.634,121.339)
N3: (57.639,29.339,119.677)
N4: (57.086,29.219,117.460)
C6: (55.163,28.348,120.366)
C5: (55.447,28.532,119.065)
O3': (53.301,30.077,124.798)
C2: (56.841,32.509,116.952)
OP1: (50.094,31.682,112.704)
OP2: (49.411,32.151,115.132)
C4: (56.328,32.605,119.226)
O5': (51.710,32.652,114.338)
C3': (53.752,30.831,113.643)
C1': (55.205,31.634,115.304)
O4': (54.741,32.771,114.619)
C5': (52.672,33.143,113.406)
P: (50.182,32.524,113.921)
O2: (57.626,32.686,116.001)
C4': (53.940,32.336,113.485)
C2': (54.101,30.602,115.109)
O2': (54.611,29.308,115.349)
N1: (55.551,31.999,116.694)
N3: (57.197,32.797,118.230)
N4: (56.732,32.885,120.464)
C6: (54.660,31.831,117.723)
C5: (55.005,32.114,118.992)
O3': (54.700,30.159,112.840)
OP1: (50.094,31.682,112.704)
OP2: (49.411,32.151,115.132)
C4: (56.328,32.605,119.226)
O5': (51.710,32.652,114.338)
C3': (53.752,30.831,113.643)
C1': (55.205,31.634,115.304)
O4': (54.741,32.771,114.619)
C5': (52.672,33.143,113.406)
P: (50.182,32.524,113.921)
O2: (57.626,32.686,116.001)
C4': (53.940,32.336,113.485)
C2': (54.101,30.602,115.109)
O2': (54.611,29.308,115.349)
N1: (55.551,31.999,116.694)
N3: (57.197,32.797,118.230)
N4: (56.732,32.885,120.464)
C6: (54.660,31.831,117.723)
C5: (55.005,32.114,118.992)
O3': (54.700,30.159,112.840)
Image (generated by PyMOL):