Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01063:01064
Extra
PDB:
ATOM 1 O3' C A1062 17.887 115.237 122.468 1.00 50.14 O
ATOM 2 P C A1063 17.823 115.003 120.889 1.00 49.16 P
ATOM 3 OP1 C A1063 16.741 115.885 120.401 1.00 52.02 O
ATOM 4 OP2 C A1063 17.752 113.552 120.626 1.00 49.63 O
ATOM 5 O5' C A1063 19.220 115.564 120.369 1.00 48.47 O
ATOM 6 C5' C A1063 19.531 116.960 120.504 1.00 47.48 C
ATOM 7 C4' C A1063 20.952 117.247 120.071 1.00 47.10 C
ATOM 8 O4' C A1063 21.901 116.653 120.996 1.00 45.81 O
ATOM 9 C3' C A1063 21.396 116.720 118.720 1.00 46.28 C
ATOM 10 O3' C A1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 11 C2' C A1063 22.910 116.791 118.856 1.00 46.49 C
ATOM 12 O2' C A1063 23.396 118.117 118.737 1.00 49.47 O
ATOM 13 C1' C A1063 23.098 116.333 120.302 1.00 44.82 C
ATOM 14 N1 C A1063 23.339 114.882 120.403 1.00 43.49 N
ATOM 15 C2 C A1063 24.653 114.406 120.329 1.00 42.44 C
ATOM 16 O2 C A1063 25.580 115.211 120.203 1.00 44.08 O
ATOM 17 N3 C A1063 24.878 113.083 120.399 1.00 40.63 N
ATOM 18 C4 C A1063 23.858 112.242 120.536 1.00 42.04 C
ATOM 19 N4 C A1063 24.125 110.941 120.578 1.00 42.15 N
ATOM 20 C5 C A1063 22.514 112.696 120.629 1.00 44.01 C
ATOM 21 C6 C A1063 22.301 114.010 120.559 1.00 43.90 C
ATOM 22 P C A1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 23 OP1 C A1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 24 OP2 C A1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 25 O5' C A1064 19.682 115.661 116.513 1.00 45.49 O
TER
ATOM 1 O3' C B1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 2 P C B1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 3 OP1 C B1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 4 OP2 C B1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 5 O5' C B1064 19.682 115.661 116.513 1.00 45.49 O
ATOM 6 C5' C B1064 18.966 115.011 115.464 1.00 45.49 C
ATOM 7 C4' C B1064 18.643 113.592 115.857 1.00 49.13 C
ATOM 8 O4' C B1064 19.811 112.744 115.687 1.00 50.03 O
ATOM 9 C3' C B1064 18.162 113.380 117.290 1.00 50.96 C
ATOM 10 O3' C B1064 17.195 112.339 117.296 1.00 51.02 O
ATOM 11 C2' C B1064 19.430 112.918 118.001 1.00 50.66 C
ATOM 12 O2' C B1064 19.182 112.110 119.130 1.00 49.85 O
ATOM 13 C1' C B1064 20.107 112.092 116.908 1.00 50.44 C
ATOM 14 N1 C B1064 21.570 112.041 117.048 1.00 50.32 N
ATOM 15 C2 C B1064 22.211 110.792 117.158 1.00 50.33 C
ATOM 16 O2 C B1064 21.532 109.750 117.157 1.00 48.06 O
ATOM 17 N3 C B1064 23.555 110.758 117.260 1.00 51.49 N
ATOM 18 C4 C B1064 24.256 111.897 117.255 1.00 51.36 C
ATOM 19 N4 C B1064 25.588 111.814 117.331 1.00 52.38 N
ATOM 20 C5 C B1064 23.628 113.171 117.164 1.00 51.00 C
ATOM 21 C6 C B1064 22.302 113.197 117.063 1.00 49.59 C
ATOM 22 P A B1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 23 OP1 A B1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 24 OP2 A B1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 25 O5' A B1065 15.014 111.305 116.642 1.00 47.07 O
TER
ATOM 2 P C A1063 17.823 115.003 120.889 1.00 49.16 P
ATOM 3 OP1 C A1063 16.741 115.885 120.401 1.00 52.02 O
ATOM 4 OP2 C A1063 17.752 113.552 120.626 1.00 49.63 O
ATOM 5 O5' C A1063 19.220 115.564 120.369 1.00 48.47 O
ATOM 6 C5' C A1063 19.531 116.960 120.504 1.00 47.48 C
ATOM 7 C4' C A1063 20.952 117.247 120.071 1.00 47.10 C
ATOM 8 O4' C A1063 21.901 116.653 120.996 1.00 45.81 O
ATOM 9 C3' C A1063 21.396 116.720 118.720 1.00 46.28 C
ATOM 10 O3' C A1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 11 C2' C A1063 22.910 116.791 118.856 1.00 46.49 C
ATOM 12 O2' C A1063 23.396 118.117 118.737 1.00 49.47 O
ATOM 13 C1' C A1063 23.098 116.333 120.302 1.00 44.82 C
ATOM 14 N1 C A1063 23.339 114.882 120.403 1.00 43.49 N
ATOM 15 C2 C A1063 24.653 114.406 120.329 1.00 42.44 C
ATOM 16 O2 C A1063 25.580 115.211 120.203 1.00 44.08 O
ATOM 17 N3 C A1063 24.878 113.083 120.399 1.00 40.63 N
ATOM 18 C4 C A1063 23.858 112.242 120.536 1.00 42.04 C
ATOM 19 N4 C A1063 24.125 110.941 120.578 1.00 42.15 N
ATOM 20 C5 C A1063 22.514 112.696 120.629 1.00 44.01 C
ATOM 21 C6 C A1063 22.301 114.010 120.559 1.00 43.90 C
ATOM 22 P C A1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 23 OP1 C A1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 24 OP2 C A1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 25 O5' C A1064 19.682 115.661 116.513 1.00 45.49 O
TER
ATOM 1 O3' C B1063 20.930 117.528 117.647 1.00 45.77 O
ATOM 2 P C B1064 20.676 116.867 116.205 1.00 46.51 P
ATOM 3 OP1 C B1064 21.953 116.283 115.693 1.00 45.52 O
ATOM 4 OP2 C B1064 19.961 117.894 115.406 1.00 46.08 O
ATOM 5 O5' C B1064 19.682 115.661 116.513 1.00 45.49 O
ATOM 6 C5' C B1064 18.966 115.011 115.464 1.00 45.49 C
ATOM 7 C4' C B1064 18.643 113.592 115.857 1.00 49.13 C
ATOM 8 O4' C B1064 19.811 112.744 115.687 1.00 50.03 O
ATOM 9 C3' C B1064 18.162 113.380 117.290 1.00 50.96 C
ATOM 10 O3' C B1064 17.195 112.339 117.296 1.00 51.02 O
ATOM 11 C2' C B1064 19.430 112.918 118.001 1.00 50.66 C
ATOM 12 O2' C B1064 19.182 112.110 119.130 1.00 49.85 O
ATOM 13 C1' C B1064 20.107 112.092 116.908 1.00 50.44 C
ATOM 14 N1 C B1064 21.570 112.041 117.048 1.00 50.32 N
ATOM 15 C2 C B1064 22.211 110.792 117.158 1.00 50.33 C
ATOM 16 O2 C B1064 21.532 109.750 117.157 1.00 48.06 O
ATOM 17 N3 C B1064 23.555 110.758 117.260 1.00 51.49 N
ATOM 18 C4 C B1064 24.256 111.897 117.255 1.00 51.36 C
ATOM 19 N4 C B1064 25.588 111.814 117.331 1.00 52.38 N
ATOM 20 C5 C B1064 23.628 113.171 117.164 1.00 51.00 C
ATOM 21 C6 C B1064 22.302 113.197 117.063 1.00 49.59 C
ATOM 22 P A B1065 15.651 112.699 117.070 1.00 48.63 P
ATOM 23 OP1 A B1065 15.603 113.628 115.922 1.00 47.50 O
ATOM 24 OP2 A B1065 15.084 113.116 118.376 1.00 49.14 O
ATOM 25 O5' A B1065 15.014 111.305 116.642 1.00 47.07 O
TER
Atoms:
C2: (24.653,114.406,120.329)
OP1: (16.741,115.885,120.401)
OP2: (17.752,113.552,120.626)
C4: (23.858,112.242,120.536)
O5': (19.220,115.564,120.369)
C3': (21.396,116.720,118.720)
C1': (23.098,116.333,120.302)
O4': (21.901,116.653,120.996)
C5': (19.531,116.960,120.504)
P: (17.823,115.003,120.889)
O2: (25.580,115.211,120.203)
C4': (20.952,117.247,120.071)
C2': (22.910,116.791,118.856)
O2': (23.396,118.117,118.737)
N1: (23.339,114.882,120.403)
N3: (24.878,113.083,120.399)
N4: (24.125,110.941,120.578)
C6: (22.301,114.010,120.559)
C5: (22.514,112.696,120.629)
O3': (20.930,117.528,117.647)
OP1: (16.741,115.885,120.401)
OP2: (17.752,113.552,120.626)
C4: (23.858,112.242,120.536)
O5': (19.220,115.564,120.369)
C3': (21.396,116.720,118.720)
C1': (23.098,116.333,120.302)
O4': (21.901,116.653,120.996)
C5': (19.531,116.960,120.504)
P: (17.823,115.003,120.889)
O2: (25.580,115.211,120.203)
C4': (20.952,117.247,120.071)
C2': (22.910,116.791,118.856)
O2': (23.396,118.117,118.737)
N1: (23.339,114.882,120.403)
N3: (24.878,113.083,120.399)
N4: (24.125,110.941,120.578)
C6: (22.301,114.010,120.559)
C5: (22.514,112.696,120.629)
O3': (20.930,117.528,117.647)
C2: (22.211,110.792,117.158)
OP1: (21.953,116.283,115.693)
OP2: (19.961,117.894,115.406)
C4: (24.256,111.897,117.255)
O5': (19.682,115.661,116.513)
C3': (18.162,113.380,117.290)
C1': (20.107,112.092,116.908)
O4': (19.811,112.744,115.687)
C5': (18.966,115.011,115.464)
P: (20.676,116.867,116.205)
O2: (21.532,109.750,117.157)
C4': (18.643,113.592,115.857)
C2': (19.430,112.918,118.001)
O2': (19.182,112.110,119.130)
N1: (21.570,112.041,117.048)
N3: (23.555,110.758,117.260)
N4: (25.588,111.814,117.331)
C6: (22.302,113.197,117.063)
C5: (23.628,113.171,117.164)
O3': (17.195,112.339,117.296)
OP1: (21.953,116.283,115.693)
OP2: (19.961,117.894,115.406)
C4: (24.256,111.897,117.255)
O5': (19.682,115.661,116.513)
C3': (18.162,113.380,117.290)
C1': (20.107,112.092,116.908)
O4': (19.811,112.744,115.687)
C5': (18.966,115.011,115.464)
P: (20.676,116.867,116.205)
O2: (21.532,109.750,117.157)
C4': (18.643,113.592,115.857)
C2': (19.430,112.918,118.001)
O2': (19.182,112.110,119.130)
N1: (21.570,112.041,117.048)
N3: (23.555,110.758,117.260)
N4: (25.588,111.814,117.331)
C6: (22.302,113.197,117.063)
C5: (23.628,113.171,117.164)
O3': (17.195,112.339,117.296)
Image (generated by PyMOL):