Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01063:01064
Extra
PDB:
ATOM 1 O3' C A1062 17.716 115.061 122.053 1.00 42.80 O
ATOM 2 P C A1063 17.670 114.798 120.474 1.00 44.30 P
ATOM 3 OP1 C A1063 16.556 115.616 119.947 1.00 47.23 O
ATOM 4 OP2 C A1063 17.671 113.337 120.238 1.00 42.75 O
ATOM 5 O5' C A1063 19.041 115.409 119.948 1.00 41.56 O
ATOM 6 C5' C A1063 19.357 116.789 120.177 1.00 40.84 C
ATOM 7 C4' C A1063 20.781 117.089 119.764 1.00 42.16 C
ATOM 8 O4' C A1063 21.730 116.482 120.681 1.00 41.64 O
ATOM 9 C3' C A1063 21.222 116.555 118.415 1.00 42.01 C
ATOM 10 O3' C A1063 20.738 117.336 117.344 1.00 41.84 O
ATOM 11 C2' C A1063 22.733 116.630 118.537 1.00 41.55 C
ATOM 12 O2' C A1063 23.208 117.956 118.411 1.00 42.99 O
ATOM 13 C1' C A1063 22.928 116.170 119.981 1.00 40.77 C
ATOM 14 N1 C A1063 23.168 114.719 120.059 1.00 40.16 N
ATOM 15 C2 C A1063 24.479 114.244 119.924 1.00 39.13 C
ATOM 16 O2 C A1063 25.400 115.057 119.760 1.00 39.16 O
ATOM 17 N3 C A1063 24.709 112.916 119.978 1.00 36.47 N
ATOM 18 C4 C A1063 23.694 112.073 120.157 1.00 37.39 C
ATOM 19 N4 C A1063 23.961 110.773 120.179 1.00 38.33 N
ATOM 20 C5 C A1063 22.355 112.527 120.313 1.00 38.83 C
ATOM 21 C6 C A1063 22.138 113.843 120.255 1.00 39.66 C
ATOM 22 P C A1064 20.516 116.653 115.911 1.00 42.38 P
ATOM 23 OP1 C A1064 21.824 116.211 115.370 1.00 41.49 O
ATOM 24 OP2 C A1064 19.669 117.599 115.130 1.00 42.31 O
ATOM 25 O5' C A1064 19.684 115.336 116.218 1.00 41.00 O
TER
ATOM 1 O3' C B1063 20.738 117.336 117.344 1.00 41.84 O
ATOM 2 P C B1064 20.516 116.653 115.911 1.00 42.38 P
ATOM 3 OP1 C B1064 21.824 116.211 115.370 1.00 41.49 O
ATOM 4 OP2 C B1064 19.669 117.599 115.130 1.00 42.31 O
ATOM 5 O5' C B1064 19.684 115.336 116.218 1.00 41.00 O
ATOM 6 C5' C B1064 18.976 114.672 115.169 1.00 41.73 C
ATOM 7 C4' C B1064 18.622 113.268 115.579 1.00 43.28 C
ATOM 8 O4' C B1064 19.773 112.401 115.429 1.00 42.02 O
ATOM 9 C3' C B1064 18.131 113.099 117.010 1.00 43.27 C
ATOM 10 O3' C B1064 17.133 112.091 117.022 1.00 42.79 O
ATOM 11 C2' C B1064 19.398 112.659 117.736 1.00 42.99 C
ATOM 12 O2' C B1064 19.163 111.909 118.908 1.00 42.57 O
ATOM 13 C1' C B1064 20.081 111.802 116.670 1.00 41.85 C
ATOM 14 N1 C B1064 21.543 111.772 116.789 1.00 40.64 N
ATOM 15 C2 C B1064 22.196 110.538 116.841 1.00 40.30 C
ATOM 16 O2 C B1064 21.529 109.496 116.805 1.00 39.44 O
ATOM 17 N3 C B1064 23.538 110.511 116.926 1.00 41.49 N
ATOM 18 C4 C B1064 24.228 111.652 116.954 1.00 41.68 C
ATOM 19 N4 C B1064 25.557 111.575 117.015 1.00 44.17 N
ATOM 20 C5 C B1064 23.588 112.921 116.917 1.00 40.97 C
ATOM 21 C6 C B1064 22.261 112.936 116.837 1.00 40.82 C
ATOM 22 P A B1065 15.606 112.499 116.758 1.00 42.03 P
ATOM 23 OP1 A B1065 15.586 113.315 115.526 1.00 40.83 O
ATOM 24 OP2 A B1065 15.058 113.063 118.016 1.00 42.09 O
ATOM 25 O5' A B1065 14.894 111.115 116.444 1.00 37.88 O
TER
ATOM 2 P C A1063 17.670 114.798 120.474 1.00 44.30 P
ATOM 3 OP1 C A1063 16.556 115.616 119.947 1.00 47.23 O
ATOM 4 OP2 C A1063 17.671 113.337 120.238 1.00 42.75 O
ATOM 5 O5' C A1063 19.041 115.409 119.948 1.00 41.56 O
ATOM 6 C5' C A1063 19.357 116.789 120.177 1.00 40.84 C
ATOM 7 C4' C A1063 20.781 117.089 119.764 1.00 42.16 C
ATOM 8 O4' C A1063 21.730 116.482 120.681 1.00 41.64 O
ATOM 9 C3' C A1063 21.222 116.555 118.415 1.00 42.01 C
ATOM 10 O3' C A1063 20.738 117.336 117.344 1.00 41.84 O
ATOM 11 C2' C A1063 22.733 116.630 118.537 1.00 41.55 C
ATOM 12 O2' C A1063 23.208 117.956 118.411 1.00 42.99 O
ATOM 13 C1' C A1063 22.928 116.170 119.981 1.00 40.77 C
ATOM 14 N1 C A1063 23.168 114.719 120.059 1.00 40.16 N
ATOM 15 C2 C A1063 24.479 114.244 119.924 1.00 39.13 C
ATOM 16 O2 C A1063 25.400 115.057 119.760 1.00 39.16 O
ATOM 17 N3 C A1063 24.709 112.916 119.978 1.00 36.47 N
ATOM 18 C4 C A1063 23.694 112.073 120.157 1.00 37.39 C
ATOM 19 N4 C A1063 23.961 110.773 120.179 1.00 38.33 N
ATOM 20 C5 C A1063 22.355 112.527 120.313 1.00 38.83 C
ATOM 21 C6 C A1063 22.138 113.843 120.255 1.00 39.66 C
ATOM 22 P C A1064 20.516 116.653 115.911 1.00 42.38 P
ATOM 23 OP1 C A1064 21.824 116.211 115.370 1.00 41.49 O
ATOM 24 OP2 C A1064 19.669 117.599 115.130 1.00 42.31 O
ATOM 25 O5' C A1064 19.684 115.336 116.218 1.00 41.00 O
TER
ATOM 1 O3' C B1063 20.738 117.336 117.344 1.00 41.84 O
ATOM 2 P C B1064 20.516 116.653 115.911 1.00 42.38 P
ATOM 3 OP1 C B1064 21.824 116.211 115.370 1.00 41.49 O
ATOM 4 OP2 C B1064 19.669 117.599 115.130 1.00 42.31 O
ATOM 5 O5' C B1064 19.684 115.336 116.218 1.00 41.00 O
ATOM 6 C5' C B1064 18.976 114.672 115.169 1.00 41.73 C
ATOM 7 C4' C B1064 18.622 113.268 115.579 1.00 43.28 C
ATOM 8 O4' C B1064 19.773 112.401 115.429 1.00 42.02 O
ATOM 9 C3' C B1064 18.131 113.099 117.010 1.00 43.27 C
ATOM 10 O3' C B1064 17.133 112.091 117.022 1.00 42.79 O
ATOM 11 C2' C B1064 19.398 112.659 117.736 1.00 42.99 C
ATOM 12 O2' C B1064 19.163 111.909 118.908 1.00 42.57 O
ATOM 13 C1' C B1064 20.081 111.802 116.670 1.00 41.85 C
ATOM 14 N1 C B1064 21.543 111.772 116.789 1.00 40.64 N
ATOM 15 C2 C B1064 22.196 110.538 116.841 1.00 40.30 C
ATOM 16 O2 C B1064 21.529 109.496 116.805 1.00 39.44 O
ATOM 17 N3 C B1064 23.538 110.511 116.926 1.00 41.49 N
ATOM 18 C4 C B1064 24.228 111.652 116.954 1.00 41.68 C
ATOM 19 N4 C B1064 25.557 111.575 117.015 1.00 44.17 N
ATOM 20 C5 C B1064 23.588 112.921 116.917 1.00 40.97 C
ATOM 21 C6 C B1064 22.261 112.936 116.837 1.00 40.82 C
ATOM 22 P A B1065 15.606 112.499 116.758 1.00 42.03 P
ATOM 23 OP1 A B1065 15.586 113.315 115.526 1.00 40.83 O
ATOM 24 OP2 A B1065 15.058 113.063 118.016 1.00 42.09 O
ATOM 25 O5' A B1065 14.894 111.115 116.444 1.00 37.88 O
TER
Atoms:
C2: (24.479,114.244,119.924)
OP1: (16.556,115.616,119.947)
OP2: (17.671,113.337,120.238)
C4: (23.694,112.073,120.157)
O5': (19.041,115.409,119.948)
C3': (21.222,116.555,118.415)
C1': (22.928,116.170,119.981)
O4': (21.730,116.482,120.681)
C5': (19.357,116.789,120.177)
P: (17.670,114.798,120.474)
O2: (25.400,115.057,119.760)
C4': (20.781,117.089,119.764)
C2': (22.733,116.630,118.537)
O2': (23.208,117.956,118.411)
N1: (23.168,114.719,120.059)
N3: (24.709,112.916,119.978)
N4: (23.961,110.773,120.179)
C6: (22.138,113.843,120.255)
C5: (22.355,112.527,120.313)
O3': (20.738,117.336,117.344)
OP1: (16.556,115.616,119.947)
OP2: (17.671,113.337,120.238)
C4: (23.694,112.073,120.157)
O5': (19.041,115.409,119.948)
C3': (21.222,116.555,118.415)
C1': (22.928,116.170,119.981)
O4': (21.730,116.482,120.681)
C5': (19.357,116.789,120.177)
P: (17.670,114.798,120.474)
O2: (25.400,115.057,119.760)
C4': (20.781,117.089,119.764)
C2': (22.733,116.630,118.537)
O2': (23.208,117.956,118.411)
N1: (23.168,114.719,120.059)
N3: (24.709,112.916,119.978)
N4: (23.961,110.773,120.179)
C6: (22.138,113.843,120.255)
C5: (22.355,112.527,120.313)
O3': (20.738,117.336,117.344)
C2: (22.196,110.538,116.841)
OP1: (21.824,116.211,115.370)
OP2: (19.669,117.599,115.130)
C4: (24.228,111.652,116.954)
O5': (19.684,115.336,116.218)
C3': (18.131,113.099,117.010)
C1': (20.081,111.802,116.670)
O4': (19.773,112.401,115.429)
C5': (18.976,114.672,115.169)
P: (20.516,116.653,115.911)
O2: (21.529,109.496,116.805)
C4': (18.622,113.268,115.579)
C2': (19.398,112.659,117.736)
O2': (19.163,111.909,118.908)
N1: (21.543,111.772,116.789)
N3: (23.538,110.511,116.926)
N4: (25.557,111.575,117.015)
C6: (22.261,112.936,116.837)
C5: (23.588,112.921,116.917)
O3': (17.133,112.091,117.022)
OP1: (21.824,116.211,115.370)
OP2: (19.669,117.599,115.130)
C4: (24.228,111.652,116.954)
O5': (19.684,115.336,116.218)
C3': (18.131,113.099,117.010)
C1': (20.081,111.802,116.670)
O4': (19.773,112.401,115.429)
C5': (18.976,114.672,115.169)
P: (20.516,116.653,115.911)
O2: (21.529,109.496,116.805)
C4': (18.622,113.268,115.579)
C2': (19.398,112.659,117.736)
O2': (19.163,111.909,118.908)
N1: (21.543,111.772,116.789)
N3: (23.538,110.511,116.926)
N4: (25.557,111.575,117.015)
C6: (22.261,112.936,116.837)
C5: (23.588,112.921,116.917)
O3': (17.133,112.091,117.022)
Image (generated by PyMOL):