Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0118:0129
Extra
PDB:
ATOM 1 O3' A A 117 84.287 151.922 22.351 1.00 69.01 O
ATOM 2 P C A 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 3 OP1 C A 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 4 OP2 C A 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 5 O5' C A 118 84.145 149.404 22.238 1.00 67.84 O
ATOM 6 C5' C A 118 83.364 149.393 23.451 1.00 63.76 C
ATOM 7 C4' C A 118 83.099 147.974 23.886 1.00 60.14 C
ATOM 8 O4' C A 118 82.270 147.305 22.902 1.00 61.25 O
ATOM 9 C3' C A 118 84.325 147.087 23.965 1.00 58.40 C
ATOM 10 O3' C A 118 85.044 147.303 25.167 1.00 53.93 O
ATOM 11 C2' C A 118 83.716 145.694 23.885 1.00 60.20 C
ATOM 12 O2' C A 118 83.130 145.265 25.092 1.00 60.69 O
ATOM 13 C1' C A 118 82.590 145.920 22.879 1.00 62.29 C
ATOM 14 N1 C A 118 82.948 145.515 21.506 1.00 64.72 N
ATOM 15 C2 C A 118 82.991 144.140 21.203 1.00 66.70 C
ATOM 16 O2 C A 118 82.717 143.315 22.097 1.00 66.36 O
ATOM 17 N3 C A 118 83.328 143.748 19.945 1.00 67.55 N
ATOM 18 C4 C A 118 83.607 144.664 19.011 1.00 66.63 C
ATOM 19 N4 C A 118 83.932 144.234 17.785 1.00 64.38 N
ATOM 20 C5 C A 118 83.566 146.064 19.292 1.00 66.46 C
ATOM 21 C6 C A 118 83.237 146.441 20.540 1.00 65.24 C
ATOM 22 P A A 119 86.614 147.606 25.103 1.00 49.74 P
ATOM 23 OP1 A A 119 86.751 149.053 24.880 1.00 50.24 O
ATOM 24 OP2 A A 119 87.257 146.662 24.171 1.00 50.31 O
ATOM 25 O5' A A 119 87.132 147.249 26.561 1.00 48.57 O
TER
ATOM 1 O3' G B 128 93.304 149.099 15.832 1.00 66.23 O
ATOM 2 P C B 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C B 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C B 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C B 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C B 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C B 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C B 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C B 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C B 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C B 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C B 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C B 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C B 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C B 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C B 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C B 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C B 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C B 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C B 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C B 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G B 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G B 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G B 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G B 130 86.012 149.419 13.932 1.00 54.01 O
TER
ATOM 2 P C A 118 85.115 150.620 21.883 1.00 69.06 P
ATOM 3 OP1 C A 118 86.382 150.494 22.660 1.00 69.94 O
ATOM 4 OP2 C A 118 85.182 150.670 20.403 1.00 69.25 O
ATOM 5 O5' C A 118 84.145 149.404 22.238 1.00 67.84 O
ATOM 6 C5' C A 118 83.364 149.393 23.451 1.00 63.76 C
ATOM 7 C4' C A 118 83.099 147.974 23.886 1.00 60.14 C
ATOM 8 O4' C A 118 82.270 147.305 22.902 1.00 61.25 O
ATOM 9 C3' C A 118 84.325 147.087 23.965 1.00 58.40 C
ATOM 10 O3' C A 118 85.044 147.303 25.167 1.00 53.93 O
ATOM 11 C2' C A 118 83.716 145.694 23.885 1.00 60.20 C
ATOM 12 O2' C A 118 83.130 145.265 25.092 1.00 60.69 O
ATOM 13 C1' C A 118 82.590 145.920 22.879 1.00 62.29 C
ATOM 14 N1 C A 118 82.948 145.515 21.506 1.00 64.72 N
ATOM 15 C2 C A 118 82.991 144.140 21.203 1.00 66.70 C
ATOM 16 O2 C A 118 82.717 143.315 22.097 1.00 66.36 O
ATOM 17 N3 C A 118 83.328 143.748 19.945 1.00 67.55 N
ATOM 18 C4 C A 118 83.607 144.664 19.011 1.00 66.63 C
ATOM 19 N4 C A 118 83.932 144.234 17.785 1.00 64.38 N
ATOM 20 C5 C A 118 83.566 146.064 19.292 1.00 66.46 C
ATOM 21 C6 C A 118 83.237 146.441 20.540 1.00 65.24 C
ATOM 22 P A A 119 86.614 147.606 25.103 1.00 49.74 P
ATOM 23 OP1 A A 119 86.751 149.053 24.880 1.00 50.24 O
ATOM 24 OP2 A A 119 87.257 146.662 24.171 1.00 50.31 O
ATOM 25 O5' A A 119 87.132 147.249 26.561 1.00 48.57 O
TER
ATOM 1 O3' G B 128 93.304 149.099 15.832 1.00 66.23 O
ATOM 2 P C B 129 92.783 148.370 17.154 1.00 63.35 P
ATOM 3 OP1 C B 129 93.633 148.834 18.277 1.00 61.86 O
ATOM 4 OP2 C B 129 92.686 146.916 16.858 1.00 62.72 O
ATOM 5 O5' C B 129 91.314 148.963 17.338 1.00 61.98 O
ATOM 6 C5' C B 129 90.331 148.247 18.092 1.00 59.31 C
ATOM 7 C4' C B 129 89.180 147.857 17.204 1.00 58.63 C
ATOM 8 O4' C B 129 88.671 146.576 17.635 1.00 60.42 O
ATOM 9 C3' C B 129 87.983 148.797 17.172 1.00 57.67 C
ATOM 10 O3' C B 129 87.341 148.645 15.904 1.00 57.29 O
ATOM 11 C2' C B 129 87.098 148.205 18.266 1.00 57.35 C
ATOM 12 O2' C B 129 85.731 148.517 18.107 1.00 54.54 O
ATOM 13 C1' C B 129 87.327 146.708 18.047 1.00 60.12 C
ATOM 14 N1 C B 129 87.129 145.803 19.202 1.00 62.75 N
ATOM 15 C2 C B 129 87.314 144.418 19.007 1.00 63.86 C
ATOM 16 O2 C B 129 87.614 143.997 17.868 1.00 64.54 O
ATOM 17 N3 C B 129 87.162 143.578 20.056 1.00 63.71 N
ATOM 18 C4 C B 129 86.836 144.060 21.255 1.00 63.51 C
ATOM 19 N4 C B 129 86.706 143.194 22.262 1.00 64.09 N
ATOM 20 C5 C B 129 86.629 145.453 21.478 1.00 63.78 C
ATOM 21 C6 C B 129 86.785 146.280 20.437 1.00 63.04 C
ATOM 22 P G B 130 87.135 149.915 14.937 1.00 54.91 P
ATOM 23 OP1 G B 130 88.384 150.100 14.150 1.00 54.66 O
ATOM 24 OP2 G B 130 86.579 151.044 15.730 1.00 54.15 O
ATOM 25 O5' G B 130 86.012 149.419 13.932 1.00 54.01 O
TER
Atoms:
C2: (82.991,144.140,21.203)
OP1: (86.382,150.494,22.660)
OP2: (85.182,150.670,20.403)
C4: (83.607,144.664,19.011)
O5': (84.145,149.404,22.238)
C3': (84.325,147.087,23.965)
C1': (82.590,145.920,22.879)
O4': (82.270,147.305,22.902)
C5': (83.364,149.393,23.451)
P: (85.115,150.620,21.883)
O2: (82.717,143.315,22.097)
C4': (83.099,147.974,23.886)
C2': (83.716,145.694,23.885)
O2': (83.130,145.265,25.092)
N1: (82.948,145.515,21.506)
N3: (83.328,143.748,19.945)
N4: (83.932,144.234,17.785)
C6: (83.237,146.441,20.540)
C5: (83.566,146.064,19.292)
O3': (85.044,147.303,25.167)
OP1: (86.382,150.494,22.660)
OP2: (85.182,150.670,20.403)
C4: (83.607,144.664,19.011)
O5': (84.145,149.404,22.238)
C3': (84.325,147.087,23.965)
C1': (82.590,145.920,22.879)
O4': (82.270,147.305,22.902)
C5': (83.364,149.393,23.451)
P: (85.115,150.620,21.883)
O2: (82.717,143.315,22.097)
C4': (83.099,147.974,23.886)
C2': (83.716,145.694,23.885)
O2': (83.130,145.265,25.092)
N1: (82.948,145.515,21.506)
N3: (83.328,143.748,19.945)
N4: (83.932,144.234,17.785)
C6: (83.237,146.441,20.540)
C5: (83.566,146.064,19.292)
O3': (85.044,147.303,25.167)
C2: (87.314,144.418,19.007)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
OP1: (93.633,148.834,18.277)
OP2: (92.686,146.916,16.858)
C4: (86.836,144.060,21.255)
O5': (91.314,148.963,17.338)
C3': (87.983,148.797,17.172)
C1': (87.327,146.708,18.047)
O4': (88.671,146.576,17.635)
C5': (90.331,148.247,18.092)
P: (92.783,148.370,17.154)
O2: (87.614,143.997,17.868)
C4': (89.180,147.857,17.204)
C2': (87.098,148.205,18.266)
O2': (85.731,148.517,18.107)
N1: (87.129,145.803,19.202)
N3: (87.162,143.578,20.056)
N4: (86.706,143.194,22.262)
C6: (86.785,146.280,20.437)
C5: (86.629,145.453,21.478)
O3': (87.341,148.645,15.904)
Image (generated by PyMOL):