Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:963:9112
Extra
PDB:
ATOM 1 O3' C A 62 50.454 25.916 121.083 1.00 59.42 O
ATOM 2 P C A 63 50.521 27.506 121.351 1.00 62.06 P
ATOM 3 OP1 C A 63 49.552 27.837 122.426 1.00 61.38 O
ATOM 4 OP2 C A 63 50.441 28.231 120.055 1.00 62.26 O
ATOM 5 O5' C A 63 51.976 27.725 121.958 1.00 61.28 O
ATOM 6 C5' C A 63 52.290 27.275 123.281 1.00 60.13 C
ATOM 7 C4' C A 63 53.593 27.874 123.735 1.00 60.48 C
ATOM 8 O4' C A 63 54.669 27.371 122.910 1.00 59.78 O
ATOM 9 C3' C A 63 53.691 29.382 123.606 1.00 61.29 C
ATOM 10 O3' C A 63 53.086 30.005 124.736 1.00 64.80 O
ATOM 11 C2' C A 63 55.199 29.603 123.552 1.00 60.44 C
ATOM 12 O2' C A 63 55.804 29.564 124.829 1.00 59.52 O
ATOM 13 C1' C A 63 55.658 28.372 122.765 1.00 59.85 C
ATOM 14 N1 C A 63 55.926 28.577 121.326 1.00 59.94 N
ATOM 15 C2 C A 63 57.130 29.184 120.948 1.00 59.87 C
ATOM 16 O2 C A 63 57.911 29.573 121.832 1.00 58.89 O
ATOM 17 N3 C A 63 57.413 29.332 119.627 1.00 59.76 N
ATOM 18 C4 C A 63 56.545 28.905 118.706 1.00 58.71 C
ATOM 19 N4 C A 63 56.876 29.048 117.420 1.00 57.20 N
ATOM 20 C5 C A 63 55.302 28.307 119.063 1.00 58.95 C
ATOM 21 C6 C A 63 55.034 28.167 120.372 1.00 59.79 C
ATOM 22 P A A 64 52.168 31.311 124.541 1.00 67.84 P
ATOM 23 OP1 A A 64 51.524 31.608 125.850 1.00 67.19 O
ATOM 24 OP2 A A 64 51.319 31.107 123.331 1.00 67.23 O
ATOM 25 O5' A A 64 53.211 32.479 124.240 1.00 69.19 O
TER
ATOM 1 O3' U B 111 49.602 33.868 113.487 1.00 48.89 O
ATOM 2 P C B 112 49.983 32.368 113.881 1.00 49.23 P
ATOM 3 OP1 C B 112 49.916 31.570 112.631 1.00 48.42 O
ATOM 4 OP2 C B 112 49.155 31.981 115.050 1.00 49.64 O
ATOM 5 O5' C B 112 51.502 32.467 114.344 1.00 48.13 O
ATOM 6 C5' C B 112 52.481 33.026 113.464 1.00 49.39 C
ATOM 7 C4' C B 112 53.763 32.237 113.518 1.00 48.46 C
ATOM 8 O4' C B 112 54.582 32.694 114.629 1.00 50.06 O
ATOM 9 C3' C B 112 53.620 30.727 113.672 1.00 48.07 C
ATOM 10 O3' C B 112 54.594 30.077 112.871 1.00 48.84 O
ATOM 11 C2' C B 112 53.971 30.519 115.140 1.00 49.24 C
ATOM 12 O2' C B 112 54.482 29.234 115.421 1.00 50.96 O
ATOM 13 C1' C B 112 55.062 31.569 115.319 1.00 50.21 C
ATOM 14 N1 C B 112 55.415 31.950 116.700 1.00 50.67 N
ATOM 15 C2 C B 112 56.682 32.511 116.936 1.00 51.42 C
ATOM 16 O2 C B 112 57.437 32.733 115.964 1.00 50.66 O
ATOM 17 N3 C B 112 57.048 32.799 118.213 1.00 51.31 N
ATOM 18 C4 C B 112 56.206 32.552 119.223 1.00 50.22 C
ATOM 19 N4 C B 112 56.618 32.814 120.464 1.00 48.48 N
ATOM 20 C5 C B 112 54.905 32.017 119.004 1.00 50.13 C
ATOM 21 C6 C B 112 54.551 31.739 117.741 1.00 50.52 C
ATOM 22 P G B 113 54.129 29.287 111.555 1.00 51.02 P
ATOM 23 OP1 G B 113 53.138 28.262 111.968 1.00 50.43 O
ATOM 24 OP2 G B 113 55.321 28.885 110.768 1.00 49.19 O
ATOM 25 O5' G B 113 53.354 30.402 110.731 1.00 51.99 O
TER
ATOM 2 P C A 63 50.521 27.506 121.351 1.00 62.06 P
ATOM 3 OP1 C A 63 49.552 27.837 122.426 1.00 61.38 O
ATOM 4 OP2 C A 63 50.441 28.231 120.055 1.00 62.26 O
ATOM 5 O5' C A 63 51.976 27.725 121.958 1.00 61.28 O
ATOM 6 C5' C A 63 52.290 27.275 123.281 1.00 60.13 C
ATOM 7 C4' C A 63 53.593 27.874 123.735 1.00 60.48 C
ATOM 8 O4' C A 63 54.669 27.371 122.910 1.00 59.78 O
ATOM 9 C3' C A 63 53.691 29.382 123.606 1.00 61.29 C
ATOM 10 O3' C A 63 53.086 30.005 124.736 1.00 64.80 O
ATOM 11 C2' C A 63 55.199 29.603 123.552 1.00 60.44 C
ATOM 12 O2' C A 63 55.804 29.564 124.829 1.00 59.52 O
ATOM 13 C1' C A 63 55.658 28.372 122.765 1.00 59.85 C
ATOM 14 N1 C A 63 55.926 28.577 121.326 1.00 59.94 N
ATOM 15 C2 C A 63 57.130 29.184 120.948 1.00 59.87 C
ATOM 16 O2 C A 63 57.911 29.573 121.832 1.00 58.89 O
ATOM 17 N3 C A 63 57.413 29.332 119.627 1.00 59.76 N
ATOM 18 C4 C A 63 56.545 28.905 118.706 1.00 58.71 C
ATOM 19 N4 C A 63 56.876 29.048 117.420 1.00 57.20 N
ATOM 20 C5 C A 63 55.302 28.307 119.063 1.00 58.95 C
ATOM 21 C6 C A 63 55.034 28.167 120.372 1.00 59.79 C
ATOM 22 P A A 64 52.168 31.311 124.541 1.00 67.84 P
ATOM 23 OP1 A A 64 51.524 31.608 125.850 1.00 67.19 O
ATOM 24 OP2 A A 64 51.319 31.107 123.331 1.00 67.23 O
ATOM 25 O5' A A 64 53.211 32.479 124.240 1.00 69.19 O
TER
ATOM 1 O3' U B 111 49.602 33.868 113.487 1.00 48.89 O
ATOM 2 P C B 112 49.983 32.368 113.881 1.00 49.23 P
ATOM 3 OP1 C B 112 49.916 31.570 112.631 1.00 48.42 O
ATOM 4 OP2 C B 112 49.155 31.981 115.050 1.00 49.64 O
ATOM 5 O5' C B 112 51.502 32.467 114.344 1.00 48.13 O
ATOM 6 C5' C B 112 52.481 33.026 113.464 1.00 49.39 C
ATOM 7 C4' C B 112 53.763 32.237 113.518 1.00 48.46 C
ATOM 8 O4' C B 112 54.582 32.694 114.629 1.00 50.06 O
ATOM 9 C3' C B 112 53.620 30.727 113.672 1.00 48.07 C
ATOM 10 O3' C B 112 54.594 30.077 112.871 1.00 48.84 O
ATOM 11 C2' C B 112 53.971 30.519 115.140 1.00 49.24 C
ATOM 12 O2' C B 112 54.482 29.234 115.421 1.00 50.96 O
ATOM 13 C1' C B 112 55.062 31.569 115.319 1.00 50.21 C
ATOM 14 N1 C B 112 55.415 31.950 116.700 1.00 50.67 N
ATOM 15 C2 C B 112 56.682 32.511 116.936 1.00 51.42 C
ATOM 16 O2 C B 112 57.437 32.733 115.964 1.00 50.66 O
ATOM 17 N3 C B 112 57.048 32.799 118.213 1.00 51.31 N
ATOM 18 C4 C B 112 56.206 32.552 119.223 1.00 50.22 C
ATOM 19 N4 C B 112 56.618 32.814 120.464 1.00 48.48 N
ATOM 20 C5 C B 112 54.905 32.017 119.004 1.00 50.13 C
ATOM 21 C6 C B 112 54.551 31.739 117.741 1.00 50.52 C
ATOM 22 P G B 113 54.129 29.287 111.555 1.00 51.02 P
ATOM 23 OP1 G B 113 53.138 28.262 111.968 1.00 50.43 O
ATOM 24 OP2 G B 113 55.321 28.885 110.768 1.00 49.19 O
ATOM 25 O5' G B 113 53.354 30.402 110.731 1.00 51.99 O
TER
Atoms:
C2: (57.130,29.184,120.948)
OP1: (49.552,27.837,122.426)
OP2: (50.441,28.231,120.055)
C4: (56.545,28.905,118.706)
O5': (51.976,27.725,121.958)
C3': (53.691,29.382,123.606)
C1': (55.658,28.372,122.765)
O4': (54.669,27.371,122.910)
C5': (52.290,27.275,123.281)
P: (50.521,27.506,121.351)
O2: (57.911,29.573,121.832)
C4': (53.593,27.874,123.735)
C2': (55.199,29.603,123.552)
O2': (55.804,29.564,124.829)
N1: (55.926,28.577,121.326)
N3: (57.413,29.332,119.627)
N4: (56.876,29.048,117.420)
C6: (55.034,28.167,120.372)
C5: (55.302,28.307,119.063)
O3': (53.086,30.005,124.736)
OP1: (49.552,27.837,122.426)
OP2: (50.441,28.231,120.055)
C4: (56.545,28.905,118.706)
O5': (51.976,27.725,121.958)
C3': (53.691,29.382,123.606)
C1': (55.658,28.372,122.765)
O4': (54.669,27.371,122.910)
C5': (52.290,27.275,123.281)
P: (50.521,27.506,121.351)
O2: (57.911,29.573,121.832)
C4': (53.593,27.874,123.735)
C2': (55.199,29.603,123.552)
O2': (55.804,29.564,124.829)
N1: (55.926,28.577,121.326)
N3: (57.413,29.332,119.627)
N4: (56.876,29.048,117.420)
C6: (55.034,28.167,120.372)
C5: (55.302,28.307,119.063)
O3': (53.086,30.005,124.736)
C2: (56.682,32.511,116.936)
OP1: (49.916,31.570,112.631)
OP2: (49.155,31.981,115.050)
C4: (56.206,32.552,119.223)
O5': (51.502,32.467,114.344)
C3': (53.620,30.727,113.672)
C1': (55.062,31.569,115.319)
O4': (54.582,32.694,114.629)
C5': (52.481,33.026,113.464)
P: (49.983,32.368,113.881)
O2: (57.437,32.733,115.964)
C4': (53.763,32.237,113.518)
C2': (53.971,30.519,115.140)
O2': (54.482,29.234,115.421)
N1: (55.415,31.950,116.700)
N3: (57.048,32.799,118.213)
N4: (56.618,32.814,120.464)
C6: (54.551,31.739,117.741)
C5: (54.905,32.017,119.004)
O3': (54.594,30.077,112.871)
OP1: (49.916,31.570,112.631)
OP2: (49.155,31.981,115.050)
C4: (56.206,32.552,119.223)
O5': (51.502,32.467,114.344)
C3': (53.620,30.727,113.672)
C1': (55.062,31.569,115.319)
O4': (54.582,32.694,114.629)
C5': (52.481,33.026,113.464)
P: (49.983,32.368,113.881)
O2: (57.437,32.733,115.964)
C4': (53.763,32.237,113.518)
C2': (53.971,30.519,115.140)
O2': (54.482,29.234,115.421)
N1: (55.415,31.950,116.700)
N3: (57.048,32.799,118.213)
N4: (56.618,32.814,120.464)
C6: (54.551,31.739,117.741)
C5: (54.905,32.017,119.004)
O3': (54.594,30.077,112.871)
Image (generated by PyMOL):