ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A49:A342

Extra

PDB:
ATOM 1 O3' A A 48 -15.567 51.091 126.737 1.00 7.37 O
ATOM 2 P C A 49 -14.814 49.691 127.017 1.00 33.89 P
ATOM 3 OP1 C A 49 -14.430 49.663 128.454 1.00 31.87 O
ATOM 4 OP2 C A 49 -13.770 49.507 125.962 1.00 29.99 O
ATOM 5 O5' C A 49 -15.960 48.604 126.843 1.00 50.22 O
ATOM 6 C5' C A 49 -15.646 47.207 126.717 1.00 50.55 C
ATOM 7 C4' C A 49 -16.917 46.397 126.710 1.00 52.18 C
ATOM 8 O4' C A 49 -17.795 46.904 125.678 1.00 52.62 O
ATOM 9 C3' C A 49 -16.767 44.914 126.419 1.00 53.67 C
ATOM 10 O3' C A 49 -16.495 44.217 127.637 1.00 55.04 O
ATOM 11 C2' C A 49 -18.127 44.551 125.826 1.00 54.49 C
ATOM 12 O2' C A 49 -19.102 44.311 126.818 1.00 55.71 O
ATOM 13 C1' C A 49 -18.510 45.837 125.089 1.00 53.89 C
ATOM 14 N1 C A 49 -18.217 45.822 123.641 1.00 34.35 N
ATOM 15 C2 C A 49 -19.154 45.260 122.761 1.00 33.96 C
ATOM 16 O2 C A 49 -20.232 44.837 123.213 1.00 34.96 O
ATOM 17 N3 C A 49 -18.865 45.199 121.445 1.00 34.05 N
ATOM 18 C4 C A 49 -17.709 45.683 120.993 1.00 33.96 C
ATOM 19 N4 C A 49 -17.447 45.567 119.688 1.00 33.20 N
ATOM 20 C5 C A 49 -16.760 46.296 121.858 1.00 33.86 C
ATOM 21 C6 C A 49 -17.048 46.340 123.160 1.00 34.38 C
ATOM 22 P A A 50 -16.289 42.618 127.631 1.00 39.49 P
ATOM 23 OP1 A A 50 -15.511 42.286 128.845 1.00 70.71 O
ATOM 24 OP2 A A 50 -15.775 42.205 126.307 1.00 70.70 O
ATOM 25 O5' A A 50 -17.757 42.033 127.814 1.00 21.79 O
TER

ATOM 1 O3' G B 341 -9.133 45.630 123.441 1.00 35.18 O
ATOM 2 P C B 342 -9.123 44.836 122.033 1.00 53.47 P
ATOM 3 OP1 C B 342 -9.743 43.491 122.222 1.00 92.76 O
ATOM 4 OP2 C B 342 -7.783 44.945 121.396 1.00 94.36 O
ATOM 5 O5' C B 342 -10.104 45.699 121.137 1.00 38.19 O
ATOM 6 C5' C B 342 -11.514 45.459 121.162 1.00 37.11 C
ATOM 7 C4' C B 342 -11.924 44.743 119.904 1.00 36.21 C
ATOM 8 O4' C B 342 -12.245 43.372 120.232 1.00 37.15 O
ATOM 9 C3' C B 342 -13.166 45.283 119.225 1.00 35.80 C
ATOM 10 O3' C B 342 -12.839 46.323 118.333 1.00 34.87 O
ATOM 11 C2' C B 342 -13.687 44.071 118.485 1.00 36.20 C
ATOM 12 O2' C B 342 -12.972 43.853 117.284 1.00 37.83 O
ATOM 13 C1' C B 342 -13.365 42.956 119.479 1.00 37.31 C
ATOM 14 N1 C B 342 -14.469 42.732 120.421 1.00 29.88 N
ATOM 15 C2 C B 342 -15.659 42.159 119.950 1.00 31.07 C
ATOM 16 O2 C B 342 -15.750 41.848 118.741 1.00 32.47 O
ATOM 17 N3 C B 342 -16.682 41.960 120.819 1.00 32.94 N
ATOM 18 C4 C B 342 -16.548 42.311 122.102 1.00 33.23 C
ATOM 19 N4 C B 342 -17.585 42.107 122.921 1.00 32.74 N
ATOM 20 C5 C B 342 -15.347 42.891 122.602 1.00 31.02 C
ATOM 21 C6 C B 342 -14.345 43.081 121.738 1.00 29.22 C
ATOM 22 P A B 343 -14.010 47.223 117.705 1.00 18.70 P
ATOM 23 OP1 A B 343 -13.698 48.651 118.009 1.00 49.75 O
ATOM 24 OP2 A B 343 -15.316 46.658 118.129 1.00 51.28 O
ATOM 25 O5' A B 343 -13.826 46.970 116.143 1.00 12.95 O
TER

Atoms:
C2: (-19.154,45.260,122.761)
OP1: (-14.430,49.663,128.454)
OP2: (-13.770,49.507,125.962)
C4: (-17.709,45.683,120.993)
O5': (-15.960,48.604,126.843)
C3': (-16.767,44.914,126.419)
C1': (-18.510,45.837,125.089)
O4': (-17.795,46.904,125.678)
C5': (-15.646,47.207,126.717)
P: (-14.814,49.691,127.017)
O2: (-20.232,44.837,123.213)
C4': (-16.917,46.397,126.710)
C2': (-18.127,44.551,125.826)
O2': (-19.102,44.311,126.818)
N1: (-18.217,45.822,123.641)
N3: (-18.865,45.199,121.445)
N4: (-17.447,45.567,119.688)
C6: (-17.048,46.340,123.160)
C5: (-16.760,46.296,121.858)
O3': (-16.495,44.217,127.637)
C2: (-15.659,42.159,119.950)
OP1: (-9.743,43.491,122.222)
OP2: (-7.783,44.945,121.396)
C4: (-16.548,42.311,122.102)
O5': (-10.104,45.699,121.137)
C3': (-13.166,45.283,119.225)
C1': (-13.365,42.956,119.479)
O4': (-12.245,43.372,120.232)
C5': (-11.514,45.459,121.162)
P: (-9.123,44.836,122.033)
O2: (-15.750,41.848,118.741)
C4': (-11.924,44.743,119.904)
C2': (-13.687,44.071,118.485)
O2': (-12.972,43.853,117.284)
N1: (-14.469,42.732,120.421)
N3: (-16.682,41.960,120.819)
N4: (-17.585,42.107,122.921)
C6: (-14.345,43.081,121.738)
C5: (-15.347,42.891,122.602)
O3': (-12.839,46.323,118.333)
Image (generated by PyMOL):
PyMOL image
show in jmol