Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1008:A1009
Extra
PDB:
ATOM 1 O3' C A1007 -49.435 104.551 217.454 1.00 22.99 O
ATOM 2 P C A1008 -49.019 106.082 217.239 1.00 24.46 P
ATOM 3 OP1 C A1008 -48.120 106.452 218.365 1.00 50.49 O
ATOM 4 OP2 C A1008 -50.266 106.855 217.011 1.00 50.50 O
ATOM 5 O5' C A1008 -48.162 106.040 215.901 1.00 42.28 O
ATOM 6 C5' C A1008 -46.918 105.339 215.879 1.00 42.28 C
ATOM 7 C4' C A1008 -46.232 105.514 214.549 1.00 42.28 C
ATOM 8 O4' C A1008 -46.926 104.766 213.526 1.00 42.28 O
ATOM 9 C3' C A1008 -46.151 106.918 213.981 1.00 42.28 C
ATOM 10 O3' C A1008 -45.082 107.661 214.535 1.00 42.28 O
ATOM 11 C2' C A1008 -45.913 106.654 212.506 1.00 42.28 C
ATOM 12 O2' C A1008 -44.562 106.312 212.279 1.00 42.28 O
ATOM 13 C1' C A1008 -46.759 105.407 212.275 1.00 42.28 C
ATOM 14 N1 C A1008 -48.086 105.691 211.700 1.00 26.55 N
ATOM 15 C2 C A1008 -48.237 105.700 210.294 1.00 26.36 C
ATOM 16 O2 C A1008 -47.249 105.502 209.574 1.00 26.31 O
ATOM 17 N3 C A1008 -49.454 105.929 209.763 1.00 26.34 N
ATOM 18 C4 C A1008 -50.496 106.155 210.563 1.00 26.51 C
ATOM 19 N4 C A1008 -51.678 106.382 209.994 1.00 26.58 N
ATOM 20 C5 C A1008 -50.373 106.163 211.984 1.00 26.38 C
ATOM 21 C6 C A1008 -49.162 105.932 212.505 1.00 26.39 C
ATOM 22 P C A1009 -45.186 109.260 214.588 1.00 41.58 P
ATOM 23 OP1 C A1009 -44.897 109.769 213.227 1.00 90.42 O
ATOM 24 OP2 C A1009 -44.357 109.724 215.732 1.00 90.40 O
ATOM 25 O5' C A1009 -46.727 109.517 214.900 1.00 49.90 O
TER
ATOM 1 O3' C B1008 -45.082 107.661 214.535 1.00 42.28 O
ATOM 2 P C B1009 -45.186 109.260 214.588 1.00 41.58 P
ATOM 3 OP1 C B1009 -44.897 109.769 213.227 1.00 90.42 O
ATOM 4 OP2 C B1009 -44.357 109.724 215.732 1.00 90.40 O
ATOM 5 O5' C B1009 -46.727 109.517 214.900 1.00 49.90 O
ATOM 6 C5' C B1009 -47.143 110.684 215.622 1.00 49.90 C
ATOM 7 C4' C B1009 -48.651 110.777 215.666 1.00 49.90 C
ATOM 8 O4' C B1009 -49.166 111.067 214.338 1.00 49.90 O
ATOM 9 C3' C B1009 -49.401 109.550 216.179 1.00 49.90 C
ATOM 10 O3' C B1009 -50.532 109.974 216.930 1.00 49.90 O
ATOM 11 C2' C B1009 -49.921 108.904 214.900 1.00 49.90 C
ATOM 12 O2' C B1009 -51.141 108.223 215.107 1.00 49.90 O
ATOM 13 C1' C B1009 -50.158 110.120 213.998 1.00 49.90 C
ATOM 14 N1 C B1009 -50.051 109.825 212.555 1.00151.24 N
ATOM 15 C2 C B1009 -51.127 110.149 211.709 1.00151.22 C
ATOM 16 O2 C B1009 -52.134 110.697 212.187 1.00151.08 O
ATOM 17 N3 C B1009 -51.038 109.858 210.393 1.00151.32 N
ATOM 18 C4 C B1009 -49.937 109.276 209.909 1.00151.35 C
ATOM 19 N4 C B1009 -49.897 108.998 208.605 1.00151.30 N
ATOM 20 C5 C B1009 -48.828 108.949 210.741 1.00151.34 C
ATOM 21 C6 C B1009 -48.925 109.237 212.042 1.00151.38 C
ATOM 22 P A B1010 -50.468 110.020 218.527 1.00 29.86 P
ATOM 23 OP1 A B1010 -49.090 110.435 218.916 1.00 65.49 O
ATOM 24 OP2 A B1010 -51.046 108.768 219.080 1.00 65.53 O
ATOM 25 O5' A B1010 -51.475 111.192 218.862 1.00 27.54 O
TER
ATOM 2 P C A1008 -49.019 106.082 217.239 1.00 24.46 P
ATOM 3 OP1 C A1008 -48.120 106.452 218.365 1.00 50.49 O
ATOM 4 OP2 C A1008 -50.266 106.855 217.011 1.00 50.50 O
ATOM 5 O5' C A1008 -48.162 106.040 215.901 1.00 42.28 O
ATOM 6 C5' C A1008 -46.918 105.339 215.879 1.00 42.28 C
ATOM 7 C4' C A1008 -46.232 105.514 214.549 1.00 42.28 C
ATOM 8 O4' C A1008 -46.926 104.766 213.526 1.00 42.28 O
ATOM 9 C3' C A1008 -46.151 106.918 213.981 1.00 42.28 C
ATOM 10 O3' C A1008 -45.082 107.661 214.535 1.00 42.28 O
ATOM 11 C2' C A1008 -45.913 106.654 212.506 1.00 42.28 C
ATOM 12 O2' C A1008 -44.562 106.312 212.279 1.00 42.28 O
ATOM 13 C1' C A1008 -46.759 105.407 212.275 1.00 42.28 C
ATOM 14 N1 C A1008 -48.086 105.691 211.700 1.00 26.55 N
ATOM 15 C2 C A1008 -48.237 105.700 210.294 1.00 26.36 C
ATOM 16 O2 C A1008 -47.249 105.502 209.574 1.00 26.31 O
ATOM 17 N3 C A1008 -49.454 105.929 209.763 1.00 26.34 N
ATOM 18 C4 C A1008 -50.496 106.155 210.563 1.00 26.51 C
ATOM 19 N4 C A1008 -51.678 106.382 209.994 1.00 26.58 N
ATOM 20 C5 C A1008 -50.373 106.163 211.984 1.00 26.38 C
ATOM 21 C6 C A1008 -49.162 105.932 212.505 1.00 26.39 C
ATOM 22 P C A1009 -45.186 109.260 214.588 1.00 41.58 P
ATOM 23 OP1 C A1009 -44.897 109.769 213.227 1.00 90.42 O
ATOM 24 OP2 C A1009 -44.357 109.724 215.732 1.00 90.40 O
ATOM 25 O5' C A1009 -46.727 109.517 214.900 1.00 49.90 O
TER
ATOM 1 O3' C B1008 -45.082 107.661 214.535 1.00 42.28 O
ATOM 2 P C B1009 -45.186 109.260 214.588 1.00 41.58 P
ATOM 3 OP1 C B1009 -44.897 109.769 213.227 1.00 90.42 O
ATOM 4 OP2 C B1009 -44.357 109.724 215.732 1.00 90.40 O
ATOM 5 O5' C B1009 -46.727 109.517 214.900 1.00 49.90 O
ATOM 6 C5' C B1009 -47.143 110.684 215.622 1.00 49.90 C
ATOM 7 C4' C B1009 -48.651 110.777 215.666 1.00 49.90 C
ATOM 8 O4' C B1009 -49.166 111.067 214.338 1.00 49.90 O
ATOM 9 C3' C B1009 -49.401 109.550 216.179 1.00 49.90 C
ATOM 10 O3' C B1009 -50.532 109.974 216.930 1.00 49.90 O
ATOM 11 C2' C B1009 -49.921 108.904 214.900 1.00 49.90 C
ATOM 12 O2' C B1009 -51.141 108.223 215.107 1.00 49.90 O
ATOM 13 C1' C B1009 -50.158 110.120 213.998 1.00 49.90 C
ATOM 14 N1 C B1009 -50.051 109.825 212.555 1.00151.24 N
ATOM 15 C2 C B1009 -51.127 110.149 211.709 1.00151.22 C
ATOM 16 O2 C B1009 -52.134 110.697 212.187 1.00151.08 O
ATOM 17 N3 C B1009 -51.038 109.858 210.393 1.00151.32 N
ATOM 18 C4 C B1009 -49.937 109.276 209.909 1.00151.35 C
ATOM 19 N4 C B1009 -49.897 108.998 208.605 1.00151.30 N
ATOM 20 C5 C B1009 -48.828 108.949 210.741 1.00151.34 C
ATOM 21 C6 C B1009 -48.925 109.237 212.042 1.00151.38 C
ATOM 22 P A B1010 -50.468 110.020 218.527 1.00 29.86 P
ATOM 23 OP1 A B1010 -49.090 110.435 218.916 1.00 65.49 O
ATOM 24 OP2 A B1010 -51.046 108.768 219.080 1.00 65.53 O
ATOM 25 O5' A B1010 -51.475 111.192 218.862 1.00 27.54 O
TER
Atoms:
C2: (-48.237,105.700,210.294)
OP1: (-48.120,106.452,218.365)
OP2: (-50.266,106.855,217.011)
C4: (-50.496,106.155,210.563)
O5': (-48.162,106.040,215.901)
C3': (-46.151,106.918,213.981)
C1': (-46.759,105.407,212.275)
O4': (-46.926,104.766,213.526)
C5': (-46.918,105.339,215.879)
P: (-49.019,106.082,217.239)
O2: (-47.249,105.502,209.574)
C4': (-46.232,105.514,214.549)
C2': (-45.913,106.654,212.506)
O2': (-44.562,106.312,212.279)
N1: (-48.086,105.691,211.700)
N3: (-49.454,105.929,209.763)
N4: (-51.678,106.382,209.994)
C6: (-49.162,105.932,212.505)
C5: (-50.373,106.163,211.984)
O3': (-45.082,107.661,214.535)
OP1: (-48.120,106.452,218.365)
OP2: (-50.266,106.855,217.011)
C4: (-50.496,106.155,210.563)
O5': (-48.162,106.040,215.901)
C3': (-46.151,106.918,213.981)
C1': (-46.759,105.407,212.275)
O4': (-46.926,104.766,213.526)
C5': (-46.918,105.339,215.879)
P: (-49.019,106.082,217.239)
O2: (-47.249,105.502,209.574)
C4': (-46.232,105.514,214.549)
C2': (-45.913,106.654,212.506)
O2': (-44.562,106.312,212.279)
N1: (-48.086,105.691,211.700)
N3: (-49.454,105.929,209.763)
N4: (-51.678,106.382,209.994)
C6: (-49.162,105.932,212.505)
C5: (-50.373,106.163,211.984)
O3': (-45.082,107.661,214.535)
C2: (-51.127,110.149,211.709)
OP1: (-44.897,109.769,213.227)
OP2: (-44.357,109.724,215.732)
C4: (-49.937,109.276,209.909)
O5': (-46.727,109.517,214.900)
C3': (-49.401,109.550,216.179)
C1': (-50.158,110.120,213.998)
O4': (-49.166,111.067,214.338)
C5': (-47.143,110.684,215.622)
P: (-45.186,109.260,214.588)
O2: (-52.134,110.697,212.187)
C4': (-48.651,110.777,215.666)
C2': (-49.921,108.904,214.900)
O2': (-51.141,108.223,215.107)
N1: (-50.051,109.825,212.555)
N3: (-51.038,109.858,210.393)
N4: (-49.897,108.998,208.605)
C6: (-48.925,109.237,212.042)
C5: (-48.828,108.949,210.741)
O3': (-50.532,109.974,216.930)
OP1: (-44.897,109.769,213.227)
OP2: (-44.357,109.724,215.732)
C4: (-49.937,109.276,209.909)
O5': (-46.727,109.517,214.900)
C3': (-49.401,109.550,216.179)
C1': (-50.158,110.120,213.998)
O4': (-49.166,111.067,214.338)
C5': (-47.143,110.684,215.622)
P: (-45.186,109.260,214.588)
O2: (-52.134,110.697,212.187)
C4': (-48.651,110.777,215.666)
C2': (-49.921,108.904,214.900)
O2': (-51.141,108.223,215.107)
N1: (-50.051,109.825,212.555)
N3: (-51.038,109.858,210.393)
N4: (-49.897,108.998,208.605)
C6: (-48.925,109.237,212.042)
C5: (-48.828,108.949,210.741)
O3': (-50.532,109.974,216.930)
Image (generated by PyMOL):