Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01235:01234
Extra
PDB:
ATOM 1 O3' C A1234 2.108 82.498 63.125 1.00 48.29 O
ATOM 2 P U A1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 3 OP1 U A1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 4 OP2 U A1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 5 O5' U A1235 3.579 83.621 61.432 1.00 51.43 O
ATOM 6 C5' U A1235 2.665 84.678 61.086 1.00 52.00 C
ATOM 7 C4' U A1235 3.396 85.990 60.922 1.00 52.52 C
ATOM 8 O4' U A1235 3.937 86.428 62.200 1.00 52.63 O
ATOM 9 C3' U A1235 4.602 86.014 59.997 1.00 52.24 C
ATOM 10 O3' U A1235 4.236 86.067 58.619 1.00 52.80 O
ATOM 11 C2' U A1235 5.280 87.301 60.449 1.00 53.45 C
ATOM 12 O2' U A1235 4.604 88.443 59.954 1.00 53.48 O
ATOM 13 C1' U A1235 5.094 87.218 61.971 1.00 52.39 C
ATOM 14 N1 U A1235 6.245 86.575 62.627 1.00 52.00 N
ATOM 15 C2 U A1235 7.247 87.394 63.146 1.00 52.33 C
ATOM 16 O2 U A1235 7.190 88.619 63.134 1.00 51.72 O
ATOM 17 N3 U A1235 8.320 86.725 63.681 1.00 51.96 N
ATOM 18 C4 U A1235 8.494 85.357 63.756 1.00 52.37 C
ATOM 19 O4 U A1235 9.533 84.903 64.245 1.00 53.00 O
ATOM 20 C5 U A1235 7.407 84.588 63.232 1.00 52.31 C
ATOM 21 C6 U A1235 6.347 85.205 62.703 1.00 51.52 C
ATOM 22 P C A1236 5.098 85.250 57.525 1.00 53.94 P
ATOM 23 OP1 C A1236 4.374 85.295 56.227 1.00 52.14 O
ATOM 24 OP2 C A1236 5.443 83.928 58.118 1.00 52.89 O
ATOM 25 O5' C A1236 6.426 86.118 57.372 1.00 53.21 O
TER
ATOM 1 O3' A B1233 4.716 79.505 67.749 1.00 46.05 O
ATOM 2 P C B1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 3 OP1 C B1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 4 OP2 C B1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 5 O5' C B1234 4.169 80.944 65.780 1.00 44.41 O
ATOM 6 C5' C B1234 2.744 80.939 65.848 1.00 44.53 C
ATOM 7 C4' C B1234 2.195 82.310 65.548 1.00 45.51 C
ATOM 8 O4' C B1234 2.571 83.227 66.602 1.00 47.47 O
ATOM 9 C3' C B1234 2.715 82.992 64.302 1.00 46.13 C
ATOM 10 O3' C B1234 2.108 82.498 63.125 1.00 48.29 O
ATOM 11 C2' C B1234 2.353 84.440 64.579 1.00 47.17 C
ATOM 12 O2' C B1234 0.981 84.705 64.390 1.00 48.29 O
ATOM 13 C1' C B1234 2.675 84.539 66.071 1.00 47.03 C
ATOM 14 N1 C B1234 4.043 85.042 66.299 1.00 47.26 N
ATOM 15 C2 C B1234 4.268 86.428 66.241 1.00 48.01 C
ATOM 16 O2 C B1234 3.303 87.196 66.055 1.00 49.54 O
ATOM 17 N3 C B1234 5.525 86.896 66.390 1.00 47.63 N
ATOM 18 C4 C B1234 6.531 86.050 66.596 1.00 46.92 C
ATOM 19 N4 C B1234 7.753 86.564 66.725 1.00 48.61 N
ATOM 20 C5 C B1234 6.329 84.641 66.682 1.00 46.81 C
ATOM 21 C6 C B1234 5.082 84.185 66.535 1.00 46.28 C
ATOM 22 P U B1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 23 OP1 U B1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 24 OP2 U B1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 25 O5' U B1235 3.579 83.621 61.432 1.00 51.43 O
TER
ATOM 2 P U A1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 3 OP1 U A1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 4 OP2 U A1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 5 O5' U A1235 3.579 83.621 61.432 1.00 51.43 O
ATOM 6 C5' U A1235 2.665 84.678 61.086 1.00 52.00 C
ATOM 7 C4' U A1235 3.396 85.990 60.922 1.00 52.52 C
ATOM 8 O4' U A1235 3.937 86.428 62.200 1.00 52.63 O
ATOM 9 C3' U A1235 4.602 86.014 59.997 1.00 52.24 C
ATOM 10 O3' U A1235 4.236 86.067 58.619 1.00 52.80 O
ATOM 11 C2' U A1235 5.280 87.301 60.449 1.00 53.45 C
ATOM 12 O2' U A1235 4.604 88.443 59.954 1.00 53.48 O
ATOM 13 C1' U A1235 5.094 87.218 61.971 1.00 52.39 C
ATOM 14 N1 U A1235 6.245 86.575 62.627 1.00 52.00 N
ATOM 15 C2 U A1235 7.247 87.394 63.146 1.00 52.33 C
ATOM 16 O2 U A1235 7.190 88.619 63.134 1.00 51.72 O
ATOM 17 N3 U A1235 8.320 86.725 63.681 1.00 51.96 N
ATOM 18 C4 U A1235 8.494 85.357 63.756 1.00 52.37 C
ATOM 19 O4 U A1235 9.533 84.903 64.245 1.00 53.00 O
ATOM 20 C5 U A1235 7.407 84.588 63.232 1.00 52.31 C
ATOM 21 C6 U A1235 6.347 85.205 62.703 1.00 51.52 C
ATOM 22 P C A1236 5.098 85.250 57.525 1.00 53.94 P
ATOM 23 OP1 C A1236 4.374 85.295 56.227 1.00 52.14 O
ATOM 24 OP2 C A1236 5.443 83.928 58.118 1.00 52.89 O
ATOM 25 O5' C A1236 6.426 86.118 57.372 1.00 53.21 O
TER
ATOM 1 O3' A B1233 4.716 79.505 67.749 1.00 46.05 O
ATOM 2 P C B1234 4.999 79.644 66.177 1.00 47.25 P
ATOM 3 OP1 C B1234 4.384 78.455 65.517 1.00 47.08 O
ATOM 4 OP2 C B1234 6.448 79.923 65.979 1.00 46.75 O
ATOM 5 O5' C B1234 4.169 80.944 65.780 1.00 44.41 O
ATOM 6 C5' C B1234 2.744 80.939 65.848 1.00 44.53 C
ATOM 7 C4' C B1234 2.195 82.310 65.548 1.00 45.51 C
ATOM 8 O4' C B1234 2.571 83.227 66.602 1.00 47.47 O
ATOM 9 C3' C B1234 2.715 82.992 64.302 1.00 46.13 C
ATOM 10 O3' C B1234 2.108 82.498 63.125 1.00 48.29 O
ATOM 11 C2' C B1234 2.353 84.440 64.579 1.00 47.17 C
ATOM 12 O2' C B1234 0.981 84.705 64.390 1.00 48.29 O
ATOM 13 C1' C B1234 2.675 84.539 66.071 1.00 47.03 C
ATOM 14 N1 C B1234 4.043 85.042 66.299 1.00 47.26 N
ATOM 15 C2 C B1234 4.268 86.428 66.241 1.00 48.01 C
ATOM 16 O2 C B1234 3.303 87.196 66.055 1.00 49.54 O
ATOM 17 N3 C B1234 5.525 86.896 66.390 1.00 47.63 N
ATOM 18 C4 C B1234 6.531 86.050 66.596 1.00 46.92 C
ATOM 19 N4 C B1234 7.753 86.564 66.725 1.00 48.61 N
ATOM 20 C5 C B1234 6.329 84.641 66.682 1.00 46.81 C
ATOM 21 C6 C B1234 5.082 84.185 66.535 1.00 46.28 C
ATOM 22 P U B1235 3.020 82.186 61.839 1.00 51.14 P
ATOM 23 OP1 U B1235 2.138 81.718 60.734 1.00 52.14 O
ATOM 24 OP2 U B1235 4.151 81.324 62.289 1.00 49.54 O
ATOM 25 O5' U B1235 3.579 83.621 61.432 1.00 51.43 O
TER
Atoms:
C4: (8.494,85.357,63.756)
N3: (8.320,86.725,63.681)
OP1: (2.138,81.718,60.734)
OP2: (4.151,81.324,62.289)
C2: (7.247,87.394,63.146)
C1': (5.094,87.218,61.971)
C3': (4.602,86.014,59.997)
O5': (3.579,83.621,61.432)
O4': (3.937,86.428,62.200)
C5': (2.665,84.678,61.086)
P: (3.020,82.186,61.839)
C4': (3.396,85.990,60.922)
C2': (5.280,87.301,60.449)
O2': (4.604,88.443,59.954)
N1: (6.245,86.575,62.627)
O4: (9.533,84.903,64.245)
O2: (7.190,88.619,63.134)
C6: (6.347,85.205,62.703)
C5: (7.407,84.588,63.232)
O3': (4.236,86.067,58.619)
N3: (8.320,86.725,63.681)
OP1: (2.138,81.718,60.734)
OP2: (4.151,81.324,62.289)
C2: (7.247,87.394,63.146)
C1': (5.094,87.218,61.971)
C3': (4.602,86.014,59.997)
O5': (3.579,83.621,61.432)
O4': (3.937,86.428,62.200)
C5': (2.665,84.678,61.086)
P: (3.020,82.186,61.839)
C4': (3.396,85.990,60.922)
C2': (5.280,87.301,60.449)
O2': (4.604,88.443,59.954)
N1: (6.245,86.575,62.627)
O4: (9.533,84.903,64.245)
O2: (7.190,88.619,63.134)
C6: (6.347,85.205,62.703)
C5: (7.407,84.588,63.232)
O3': (4.236,86.067,58.619)
C2: (4.268,86.428,66.241)
OP1: (4.384,78.455,65.517)
OP2: (6.448,79.923,65.979)
C4: (6.531,86.050,66.596)
O5': (4.169,80.944,65.780)
C3': (2.715,82.992,64.302)
C1': (2.675,84.539,66.071)
O4': (2.571,83.227,66.602)
C5': (2.744,80.939,65.848)
P: (4.999,79.644,66.177)
O2: (3.303,87.196,66.055)
C4': (2.195,82.310,65.548)
C2': (2.353,84.440,64.579)
O2': (0.981,84.705,64.390)
N1: (4.043,85.042,66.299)
N3: (5.525,86.896,66.390)
N4: (7.753,86.564,66.725)
C6: (5.082,84.185,66.535)
C5: (6.329,84.641,66.682)
O3': (2.108,82.498,63.125)
OP1: (4.384,78.455,65.517)
OP2: (6.448,79.923,65.979)
C4: (6.531,86.050,66.596)
O5': (4.169,80.944,65.780)
C3': (2.715,82.992,64.302)
C1': (2.675,84.539,66.071)
O4': (2.571,83.227,66.602)
C5': (2.744,80.939,65.848)
P: (4.999,79.644,66.177)
O2: (3.303,87.196,66.055)
C4': (2.195,82.310,65.548)
C2': (2.353,84.440,64.579)
O2': (0.981,84.705,64.390)
N1: (4.043,85.042,66.299)
N3: (5.525,86.896,66.390)
N4: (7.753,86.564,66.725)
C6: (5.082,84.185,66.535)
C5: (6.329,84.641,66.682)
O3': (2.108,82.498,63.125)
Image (generated by PyMOL):