ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A485:A486

Extra

PDB:
ATOM 1 O3' G A 484 168.747 109.198 10.384 1.00 41.97 O
ATOM 2 P C A 485 167.282 109.059 11.031 1.00 42.80 P
ATOM 3 OP1 C A 485 166.688 110.429 11.051 1.00 43.89 O
ATOM 4 OP2 C A 485 167.400 108.274 12.283 1.00 42.55 O
ATOM 5 O5' C A 485 166.463 108.245 9.956 1.00 42.73 O
ATOM 6 C5' C A 485 166.183 108.832 8.672 1.00 41.17 C
ATOM 7 C4' C A 485 165.733 107.780 7.698 1.00 39.63 C
ATOM 8 O4' C A 485 166.804 106.824 7.481 1.00 39.22 O
ATOM 9 C3' C A 485 164.570 106.924 8.148 1.00 39.58 C
ATOM 10 O3' C A 485 163.334 107.573 7.977 1.00 38.98 O
ATOM 11 C2' C A 485 164.732 105.681 7.281 1.00 40.35 C
ATOM 12 O2' C A 485 164.236 105.845 5.967 1.00 42.50 O
ATOM 13 C1' C A 485 166.252 105.543 7.219 1.00 39.65 C
ATOM 14 N1 C A 485 166.736 104.574 8.227 1.00 38.58 N
ATOM 15 C2 C A 485 166.826 103.221 7.871 1.00 37.54 C
ATOM 16 O2 C A 485 166.595 102.889 6.695 1.00 37.57 O
ATOM 17 N3 C A 485 167.168 102.313 8.812 1.00 36.79 N
ATOM 18 C4 C A 485 167.447 102.713 10.056 1.00 37.08 C
ATOM 19 N4 C A 485 167.767 101.781 10.961 1.00 34.90 N
ATOM 20 C5 C A 485 167.410 104.085 10.430 1.00 36.89 C
ATOM 21 C6 C A 485 167.055 104.973 9.495 1.00 38.32 C
ATOM 22 P C A 486 162.132 107.284 9.016 1.00 38.19 P
ATOM 23 OP1 C A 486 161.616 105.901 8.787 1.00 39.28 O
ATOM 24 OP2 C A 486 161.213 108.434 8.921 1.00 38.31 O
ATOM 25 O5' C A 486 162.831 107.265 10.441 1.00 38.71 O
TER

ATOM 1 O3' C B 485 163.334 107.573 7.977 1.00 38.98 O
ATOM 2 P C B 486 162.132 107.284 9.016 1.00 38.19 P
ATOM 3 OP1 C B 486 161.616 105.901 8.787 1.00 39.28 O
ATOM 4 OP2 C B 486 161.213 108.434 8.921 1.00 38.31 O
ATOM 5 O5' C B 486 162.831 107.265 10.441 1.00 38.71 O
ATOM 6 C5' C B 486 162.072 107.491 11.642 1.00 38.83 C
ATOM 7 C4' C B 486 162.848 107.012 12.839 1.00 40.44 C
ATOM 8 O4' C B 486 162.794 105.564 12.888 1.00 41.12 O
ATOM 9 C3' C B 486 164.325 107.405 12.860 1.00 41.61 C
ATOM 10 O3' C B 486 164.744 107.697 14.192 1.00 42.40 O
ATOM 11 C2' C B 486 165.021 106.132 12.379 1.00 41.44 C
ATOM 12 O2' C B 486 166.322 105.948 12.897 1.00 42.22 O
ATOM 13 C1' C B 486 164.099 105.039 12.918 1.00 41.39 C
ATOM 14 N1 C B 486 164.119 103.810 12.108 1.00 42.61 N
ATOM 15 C2 C B 486 164.479 102.600 12.720 1.00 44.54 C
ATOM 16 O2 C B 486 164.737 102.589 13.940 1.00 45.38 O
ATOM 17 N3 C B 486 164.531 101.469 11.970 1.00 44.94 N
ATOM 18 C4 C B 486 164.232 101.517 10.668 1.00 45.33 C
ATOM 19 N4 C B 486 164.300 100.382 9.968 1.00 45.71 N
ATOM 20 C5 C B 486 163.850 102.731 10.025 1.00 45.48 C
ATOM 21 C6 C B 486 163.804 103.841 10.775 1.00 44.49 C
ATOM 22 P A B 487 164.233 109.036 14.928 1.00 41.17 P
ATOM 23 OP1 A B 487 163.701 110.002 13.928 1.00 39.67 O
ATOM 24 OP2 A B 487 165.319 109.450 15.834 1.00 41.19 O
ATOM 25 O5' A B 487 163.007 108.504 15.777 1.00 41.44 O
TER

Atoms:
C2: (166.826,103.221,7.871)
OP1: (166.688,110.429,11.051)
OP2: (167.400,108.274,12.283)
C4: (167.447,102.713,10.056)
O5': (166.463,108.245,9.956)
C3': (164.570,106.924,8.148)
C1': (166.252,105.543,7.219)
O4': (166.804,106.824,7.481)
C5': (166.183,108.832,8.672)
P: (167.282,109.059,11.031)
O2: (166.595,102.889,6.695)
C4': (165.733,107.780,7.698)
C2': (164.732,105.681,7.281)
O2': (164.236,105.845,5.967)
N1: (166.736,104.574,8.227)
N3: (167.168,102.313,8.812)
N4: (167.767,101.781,10.961)
C6: (167.055,104.973,9.495)
C5: (167.410,104.085,10.430)
O3': (163.334,107.573,7.977)
C2: (164.479,102.600,12.720)
OP1: (161.616,105.901,8.787)
OP2: (161.213,108.434,8.921)
C4: (164.232,101.517,10.668)
O5': (162.831,107.265,10.441)
C3': (164.325,107.405,12.860)
C1': (164.099,105.039,12.918)
O4': (162.794,105.564,12.888)
C5': (162.072,107.491,11.642)
P: (162.132,107.284,9.016)
O2: (164.737,102.589,13.940)
C4': (162.848,107.012,12.839)
C2': (165.021,106.132,12.379)
O2': (166.322,105.948,12.897)
N1: (164.119,103.810,12.108)
N3: (164.531,101.469,11.970)
N4: (164.300,100.382,9.968)
C6: (163.804,103.841,10.775)
C5: (163.850,102.731,10.025)
O3': (164.744,107.697,14.192)
Image (generated by PyMOL):
PyMOL image
show in jmol