Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2JLZ:D4:D3
Extra
PDB:
ATOM 1 O3' C A 3 28.223 -5.578 29.153 1.00 32.75 O
ATOM 2 P U A 4 28.823 -4.968 27.814 1.00 34.11 P
ATOM 3 OP1 U A 4 28.165 -5.637 26.676 1.00 34.96 O
ATOM 4 OP2 U A 4 28.713 -3.507 27.955 1.00 35.85 O
ATOM 5 O5' U A 4 30.359 -5.423 27.773 1.00 37.32 O
ATOM 6 C5' U A 4 31.493 -4.600 27.979 1.00 42.09 C
ATOM 7 C4' U A 4 32.690 -5.512 28.198 1.00 45.92 C
ATOM 8 O4' U A 4 32.204 -6.858 28.425 1.00 47.64 O
ATOM 9 C3' U A 4 33.653 -5.692 27.037 1.00 48.00 C
ATOM 10 O3' U A 4 34.632 -4.653 27.016 1.00 50.31 O
ATOM 11 C2' U A 4 34.295 -7.048 27.359 1.00 48.67 C
ATOM 12 O2' U A 4 35.416 -6.962 28.222 1.00 49.64 O
ATOM 13 C1' U A 4 33.199 -7.806 28.097 1.00 48.82 C
ATOM 14 N1 U A 4 32.613 -8.946 27.310 1.00 49.03 N
ATOM 15 C2 U A 4 33.296 -10.157 27.238 1.00 49.62 C
ATOM 16 O2 U A 4 34.368 -10.379 27.780 1.00 49.69 O
ATOM 17 N3 U A 4 32.670 -11.127 26.488 1.00 49.68 N
ATOM 18 C4 U A 4 31.457 -11.016 25.821 1.00 49.86 C
ATOM 19 O4 U A 4 31.022 -11.978 25.192 1.00 49.89 O
ATOM 20 C5 U A 4 30.807 -9.732 25.943 1.00 49.55 C
ATOM 21 C6 U A 4 31.400 -8.771 26.664 1.00 49.11 C
ATOM 22 P A A 5 34.847 -3.641 25.780 1.00 52.70 P
ATOM 23 OP1 A A 5 36.246 -3.157 25.855 1.00 52.46 O
ATOM 24 OP2 A A 5 34.383 -4.260 24.517 1.00 52.86 O
ATOM 25 O5' A A 5 33.810 -2.474 26.171 1.00 53.99 O
TER
ATOM 1 O3' A B 2 23.364 -9.184 28.875 1.00 30.36 O
ATOM 2 P C B 3 24.338 -8.491 27.814 1.00 30.99 P
ATOM 3 OP1 C B 3 23.735 -7.199 27.409 1.00 28.92 O
ATOM 4 OP2 C B 3 24.711 -9.500 26.792 1.00 30.04 O
ATOM 5 O5' C B 3 25.648 -8.204 28.703 1.00 31.80 O
ATOM 6 C5' C B 3 25.685 -7.246 29.768 1.00 30.87 C
ATOM 7 C4' C B 3 27.066 -7.213 30.401 1.00 31.07 C
ATOM 8 O4' C B 3 27.419 -8.491 30.999 1.00 31.15 O
ATOM 9 C3' C B 3 28.191 -6.956 29.416 1.00 31.35 C
ATOM 10 O3' C B 3 28.223 -5.578 29.153 1.00 32.75 O
ATOM 11 C2' C B 3 29.387 -7.454 30.222 1.00 31.45 C
ATOM 12 O2' C B 3 29.769 -6.543 31.229 1.00 29.84 O
ATOM 13 C1' C B 3 28.814 -8.718 30.866 1.00 30.92 C
ATOM 14 N1 C B 3 29.079 -9.979 30.078 1.00 30.66 N
ATOM 15 C2 C B 3 30.311 -10.643 30.215 1.00 29.69 C
ATOM 16 O2 C B 3 31.180 -10.202 30.978 1.00 30.72 O
ATOM 17 N3 C B 3 30.530 -11.774 29.501 1.00 29.97 N
ATOM 18 C4 C B 3 29.593 -12.249 28.680 1.00 30.57 C
ATOM 19 N4 C B 3 29.878 -13.368 28.009 1.00 31.16 N
ATOM 20 C5 C B 3 28.328 -11.602 28.519 1.00 30.01 C
ATOM 21 C6 C B 3 28.118 -10.485 29.230 1.00 30.43 C
ATOM 22 P U B 4 28.823 -4.968 27.814 1.00 34.11 P
ATOM 23 OP1 U B 4 28.165 -5.637 26.676 1.00 34.96 O
ATOM 24 OP2 U B 4 28.713 -3.507 27.955 1.00 35.85 O
ATOM 25 O5' U B 4 30.359 -5.423 27.773 1.00 37.32 O
TER
ATOM 2 P U A 4 28.823 -4.968 27.814 1.00 34.11 P
ATOM 3 OP1 U A 4 28.165 -5.637 26.676 1.00 34.96 O
ATOM 4 OP2 U A 4 28.713 -3.507 27.955 1.00 35.85 O
ATOM 5 O5' U A 4 30.359 -5.423 27.773 1.00 37.32 O
ATOM 6 C5' U A 4 31.493 -4.600 27.979 1.00 42.09 C
ATOM 7 C4' U A 4 32.690 -5.512 28.198 1.00 45.92 C
ATOM 8 O4' U A 4 32.204 -6.858 28.425 1.00 47.64 O
ATOM 9 C3' U A 4 33.653 -5.692 27.037 1.00 48.00 C
ATOM 10 O3' U A 4 34.632 -4.653 27.016 1.00 50.31 O
ATOM 11 C2' U A 4 34.295 -7.048 27.359 1.00 48.67 C
ATOM 12 O2' U A 4 35.416 -6.962 28.222 1.00 49.64 O
ATOM 13 C1' U A 4 33.199 -7.806 28.097 1.00 48.82 C
ATOM 14 N1 U A 4 32.613 -8.946 27.310 1.00 49.03 N
ATOM 15 C2 U A 4 33.296 -10.157 27.238 1.00 49.62 C
ATOM 16 O2 U A 4 34.368 -10.379 27.780 1.00 49.69 O
ATOM 17 N3 U A 4 32.670 -11.127 26.488 1.00 49.68 N
ATOM 18 C4 U A 4 31.457 -11.016 25.821 1.00 49.86 C
ATOM 19 O4 U A 4 31.022 -11.978 25.192 1.00 49.89 O
ATOM 20 C5 U A 4 30.807 -9.732 25.943 1.00 49.55 C
ATOM 21 C6 U A 4 31.400 -8.771 26.664 1.00 49.11 C
ATOM 22 P A A 5 34.847 -3.641 25.780 1.00 52.70 P
ATOM 23 OP1 A A 5 36.246 -3.157 25.855 1.00 52.46 O
ATOM 24 OP2 A A 5 34.383 -4.260 24.517 1.00 52.86 O
ATOM 25 O5' A A 5 33.810 -2.474 26.171 1.00 53.99 O
TER
ATOM 1 O3' A B 2 23.364 -9.184 28.875 1.00 30.36 O
ATOM 2 P C B 3 24.338 -8.491 27.814 1.00 30.99 P
ATOM 3 OP1 C B 3 23.735 -7.199 27.409 1.00 28.92 O
ATOM 4 OP2 C B 3 24.711 -9.500 26.792 1.00 30.04 O
ATOM 5 O5' C B 3 25.648 -8.204 28.703 1.00 31.80 O
ATOM 6 C5' C B 3 25.685 -7.246 29.768 1.00 30.87 C
ATOM 7 C4' C B 3 27.066 -7.213 30.401 1.00 31.07 C
ATOM 8 O4' C B 3 27.419 -8.491 30.999 1.00 31.15 O
ATOM 9 C3' C B 3 28.191 -6.956 29.416 1.00 31.35 C
ATOM 10 O3' C B 3 28.223 -5.578 29.153 1.00 32.75 O
ATOM 11 C2' C B 3 29.387 -7.454 30.222 1.00 31.45 C
ATOM 12 O2' C B 3 29.769 -6.543 31.229 1.00 29.84 O
ATOM 13 C1' C B 3 28.814 -8.718 30.866 1.00 30.92 C
ATOM 14 N1 C B 3 29.079 -9.979 30.078 1.00 30.66 N
ATOM 15 C2 C B 3 30.311 -10.643 30.215 1.00 29.69 C
ATOM 16 O2 C B 3 31.180 -10.202 30.978 1.00 30.72 O
ATOM 17 N3 C B 3 30.530 -11.774 29.501 1.00 29.97 N
ATOM 18 C4 C B 3 29.593 -12.249 28.680 1.00 30.57 C
ATOM 19 N4 C B 3 29.878 -13.368 28.009 1.00 31.16 N
ATOM 20 C5 C B 3 28.328 -11.602 28.519 1.00 30.01 C
ATOM 21 C6 C B 3 28.118 -10.485 29.230 1.00 30.43 C
ATOM 22 P U B 4 28.823 -4.968 27.814 1.00 34.11 P
ATOM 23 OP1 U B 4 28.165 -5.637 26.676 1.00 34.96 O
ATOM 24 OP2 U B 4 28.713 -3.507 27.955 1.00 35.85 O
ATOM 25 O5' U B 4 30.359 -5.423 27.773 1.00 37.32 O
TER
Atoms:
C4: (31.457,-11.016,25.821)
N3: (32.670,-11.127,26.488)
OP1: (28.165,-5.637,26.676)
OP2: (28.713,-3.507,27.955)
C2: (33.296,-10.157,27.238)
C1': (33.199,-7.806,28.097)
C3': (33.653,-5.692,27.037)
O5': (30.359,-5.423,27.773)
O4': (32.204,-6.858,28.425)
C5': (31.493,-4.600,27.979)
P: (28.823,-4.968,27.814)
C4': (32.690,-5.512,28.198)
C2': (34.295,-7.048,27.359)
O2': (35.416,-6.962,28.222)
N1: (32.613,-8.946,27.310)
O4: (31.022,-11.978,25.192)
O2: (34.368,-10.379,27.780)
C6: (31.400,-8.771,26.664)
C5: (30.807,-9.732,25.943)
O3': (34.632,-4.653,27.016)
N3: (32.670,-11.127,26.488)
OP1: (28.165,-5.637,26.676)
OP2: (28.713,-3.507,27.955)
C2: (33.296,-10.157,27.238)
C1': (33.199,-7.806,28.097)
C3': (33.653,-5.692,27.037)
O5': (30.359,-5.423,27.773)
O4': (32.204,-6.858,28.425)
C5': (31.493,-4.600,27.979)
P: (28.823,-4.968,27.814)
C4': (32.690,-5.512,28.198)
C2': (34.295,-7.048,27.359)
O2': (35.416,-6.962,28.222)
N1: (32.613,-8.946,27.310)
O4: (31.022,-11.978,25.192)
O2: (34.368,-10.379,27.780)
C6: (31.400,-8.771,26.664)
C5: (30.807,-9.732,25.943)
O3': (34.632,-4.653,27.016)
C2: (30.311,-10.643,30.215)
OP1: (23.735,-7.199,27.409)
OP2: (24.711,-9.500,26.792)
C4: (29.593,-12.249,28.680)
O5': (25.648,-8.204,28.703)
C3': (28.191,-6.956,29.416)
C1': (28.814,-8.718,30.866)
O4': (27.419,-8.491,30.999)
C5': (25.685,-7.246,29.768)
P: (24.338,-8.491,27.814)
O2: (31.180,-10.202,30.978)
C4': (27.066,-7.213,30.401)
C2': (29.387,-7.454,30.222)
O2': (29.769,-6.543,31.229)
N1: (29.079,-9.979,30.078)
N3: (30.530,-11.774,29.501)
N4: (29.878,-13.368,28.009)
C6: (28.118,-10.485,29.230)
C5: (28.328,-11.602,28.519)
O3': (28.223,-5.578,29.153)
OP1: (23.735,-7.199,27.409)
OP2: (24.711,-9.500,26.792)
C4: (29.593,-12.249,28.680)
O5': (25.648,-8.204,28.703)
C3': (28.191,-6.956,29.416)
C1': (28.814,-8.718,30.866)
O4': (27.419,-8.491,30.999)
C5': (25.685,-7.246,29.768)
P: (24.338,-8.491,27.814)
O2: (31.180,-10.202,30.978)
C4': (27.066,-7.213,30.401)
C2': (29.387,-7.454,30.222)
O2': (29.769,-6.543,31.229)
N1: (29.079,-9.979,30.078)
N3: (30.530,-11.774,29.501)
N4: (29.878,-13.368,28.009)
C6: (28.118,-10.485,29.230)
C5: (28.328,-11.602,28.519)
O3': (28.223,-5.578,29.153)
Image (generated by PyMOL):