ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKI:A33:A34

Extra

PDB:
ATOM 1 O3' A A 32 -12.472 14.170 -56.302 1.00 27.00 O
ATOM 2 P C A 33 -13.039 12.726 -56.732 1.00 27.54 P
ATOM 3 OP1 C A 33 -14.277 12.492 -55.959 1.00 27.90 O
ATOM 4 OP2 C A 33 -11.944 11.730 -56.662 1.00 25.71 O
ATOM 5 O5' C A 33 -13.413 12.926 -58.274 1.00 28.58 O
ATOM 6 C5' C A 33 -14.404 13.867 -58.679 1.00 30.31 C
ATOM 7 C4' C A 33 -14.238 14.252 -60.141 1.00 31.20 C
ATOM 8 O4' C A 33 -12.904 14.784 -60.371 1.00 30.17 O
ATOM 9 C3' C A 33 -14.368 13.118 -61.152 1.00 31.20 C
ATOM 10 O3' C A 33 -15.744 12.843 -61.438 1.00 33.88 O
ATOM 11 C2' C A 33 -13.633 13.721 -62.347 1.00 31.57 C
ATOM 12 O2' C A 33 -14.406 14.682 -63.046 1.00 33.79 O
ATOM 13 C1' C A 33 -12.448 14.404 -61.661 1.00 30.31 C
ATOM 14 N1 C A 33 -11.217 13.520 -61.546 1.00 27.75 N
ATOM 15 C2 C A 33 -10.435 13.232 -62.685 1.00 27.23 C
ATOM 16 O2 C A 33 -10.746 13.697 -63.791 1.00 28.26 O
ATOM 17 N3 C A 33 -9.343 12.436 -62.548 1.00 25.59 N
ATOM 18 C4 C A 33 -9.015 11.933 -61.356 1.00 24.24 C
ATOM 19 N4 C A 33 -7.929 11.158 -61.283 1.00 23.21 N
ATOM 20 C5 C A 33 -9.786 12.209 -60.189 1.00 24.85 C
ATOM 21 C6 C A 33 -10.862 12.995 -60.330 1.00 26.28 C
ATOM 22 P C A 34 -16.231 11.405 -61.968 1.00 34.83 P
ATOM 23 OP1 C A 34 -15.401 11.000 -63.126 1.00 34.62 O
ATOM 24 OP2 C A 34 -17.703 11.452 -62.110 1.00 37.48 O
ATOM 25 O5' C A 34 -15.919 10.434 -60.745 1.00 33.45 O
TER

ATOM 1 O3' C B 33 -15.744 12.843 -61.438 1.00 33.88 O
ATOM 2 P C B 34 -16.231 11.405 -61.968 1.00 34.83 P
ATOM 3 OP1 C B 34 -15.401 11.000 -63.126 1.00 34.62 O
ATOM 4 OP2 C B 34 -17.703 11.452 -62.110 1.00 37.48 O
ATOM 5 O5' C B 34 -15.919 10.434 -60.745 1.00 33.45 O
ATOM 6 C5' C B 34 -16.243 9.046 -60.859 1.00 32.70 C
ATOM 7 C4' C B 34 -15.109 8.164 -60.365 1.00 30.10 C
ATOM 8 O4' C B 34 -14.119 7.991 -61.409 1.00 29.23 O
ATOM 9 C3' C B 34 -14.359 8.679 -59.139 1.00 28.35 C
ATOM 10 O3' C B 34 -14.129 7.609 -58.246 1.00 26.89 O
ATOM 11 C2' C B 34 -13.046 9.207 -59.709 1.00 27.28 C
ATOM 12 O2' C B 34 -11.989 9.102 -58.777 1.00 25.80 O
ATOM 13 C1' C B 34 -12.833 8.255 -60.883 1.00 27.27 C
ATOM 14 N1 C B 34 -11.957 8.766 -61.994 1.00 27.14 N
ATOM 15 C2 C B 34 -10.720 8.140 -62.249 1.00 25.81 C
ATOM 16 O2 C B 34 -10.354 7.183 -61.558 1.00 25.22 O
ATOM 17 N3 C B 34 -9.944 8.606 -63.260 1.00 26.24 N
ATOM 18 C4 C B 34 -10.350 9.637 -64.001 1.00 27.23 C
ATOM 19 N4 C B 34 -9.538 10.044 -64.981 1.00 27.56 N
ATOM 20 C5 C B 34 -11.603 10.285 -63.769 1.00 28.26 C
ATOM 21 C6 C B 34 -12.366 9.822 -62.767 1.00 28.30 C
ATOM 22 P C B 35 -15.255 7.111 -57.231 1.00 27.10 P
ATOM 23 OP1 C B 35 -16.403 8.049 -57.302 1.00 28.57 O
ATOM 24 OP2 C B 35 -14.586 6.870 -55.933 1.00 25.47 O
ATOM 25 O5' C B 35 -15.648 5.682 -57.844 1.00 27.82 O
TER

Atoms:
C2: (-10.435,13.232,-62.685)
OP1: (-14.277,12.492,-55.959)
OP2: (-11.944,11.730,-56.662)
C4: (-9.015,11.933,-61.356)
O5': (-13.413,12.926,-58.274)
C3': (-14.368,13.118,-61.152)
C1': (-12.448,14.404,-61.661)
O4': (-12.904,14.784,-60.371)
C5': (-14.404,13.867,-58.679)
P: (-13.039,12.726,-56.732)
O2: (-10.746,13.697,-63.791)
C4': (-14.238,14.252,-60.141)
C2': (-13.633,13.721,-62.347)
O2': (-14.406,14.682,-63.046)
N1: (-11.217,13.520,-61.546)
N3: (-9.343,12.436,-62.548)
N4: (-7.929,11.158,-61.283)
C6: (-10.862,12.995,-60.330)
C5: (-9.786,12.209,-60.189)
O3': (-15.744,12.843,-61.438)
C2: (-10.720,8.140,-62.249)
OP1: (-15.401,11.000,-63.126)
OP2: (-17.703,11.452,-62.110)
C4: (-10.350,9.637,-64.001)
O5': (-15.919,10.434,-60.745)
C3': (-14.359,8.679,-59.139)
C1': (-12.833,8.255,-60.883)
O4': (-14.119,7.991,-61.409)
C5': (-16.243,9.046,-60.859)
P: (-16.231,11.405,-61.968)
O2: (-10.354,7.183,-61.558)
C4': (-15.109,8.164,-60.365)
C2': (-13.046,9.207,-59.709)
O2': (-11.989,9.102,-58.777)
N1: (-11.957,8.766,-61.994)
N3: (-9.944,8.606,-63.260)
N4: (-9.538,10.044,-64.981)
C6: (-12.366,9.822,-62.767)
C5: (-11.603,10.285,-63.769)
O3': (-14.129,7.609,-58.246)
Image (generated by PyMOL):
PyMOL image
show in jmol