ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SKI:B33:B34

Extra

PDB:
ATOM 1 O3' A A 32 -11.321 -12.914 9.775 1.00 80.70 O
ATOM 2 P C A 33 -12.041 -11.627 10.411 1.00 80.54 P
ATOM 3 OP1 C A 33 -13.410 -11.557 9.850 1.00 81.56 O
ATOM 4 OP2 C A 33 -11.136 -10.466 10.255 1.00 76.23 O
ATOM 5 O5' C A 33 -12.119 -11.977 11.974 1.00 85.31 O
ATOM 6 C5' C A 33 -13.103 -12.885 12.487 1.00 91.04 C
ATOM 7 C4' C A 33 -12.780 -13.318 13.911 1.00 95.38 C
ATOM 8 O4' C A 33 -11.422 -13.815 13.963 1.00 94.44 O
ATOM 9 C3' C A 33 -12.844 -12.225 14.973 1.00 95.78 C
ATOM 10 O3' C A 33 -14.162 -12.133 15.517 1.00100.11 O
ATOM 11 C2' C A 33 -11.847 -12.704 16.031 1.00 97.82 C
ATOM 12 O2' C A 33 -12.457 -13.456 17.063 1.00103.84 O
ATOM 13 C1' C A 33 -10.874 -13.587 15.247 1.00 96.30 C
ATOM 14 N1 C A 33 -9.495 -12.993 15.115 1.00 92.15 N
ATOM 15 C2 C A 33 -8.494 -13.338 16.045 1.00 94.08 C
ATOM 16 O2 C A 33 -8.753 -14.131 16.963 1.00 98.95 O
ATOM 17 N3 C A 33 -7.256 -12.788 15.910 1.00 90.69 N
ATOM 18 C4 C A 33 -7.002 -11.934 14.911 1.00 85.72 C
ATOM 19 N4 C A 33 -5.769 -11.424 14.823 1.00 83.01 N
ATOM 20 C5 C A 33 -8.002 -11.570 13.956 1.00 83.66 C
ATOM 21 C6 C A 33 -9.219 -12.116 14.096 1.00 87.01 C
ATOM 22 P C A 34 -15.098 -10.856 15.250 1.00 99.00 P
ATOM 23 OP1 C A 34 -16.175 -10.878 16.265 1.00104.73 O
ATOM 24 OP2 C A 34 -15.446 -10.841 13.811 1.00 95.80 O
ATOM 25 O5' C A 34 -14.147 -9.597 15.538 1.00 95.08 O
TER

ATOM 1 O3' C B 33 -14.162 -12.133 15.517 1.00100.11 O
ATOM 2 P C B 34 -15.098 -10.856 15.250 1.00 99.00 P
ATOM 3 OP1 C B 34 -16.175 -10.878 16.265 1.00104.73 O
ATOM 4 OP2 C B 34 -15.446 -10.841 13.811 1.00 95.80 O
ATOM 5 O5' C B 34 -14.147 -9.597 15.538 1.00 95.08 O
ATOM 6 C5' C B 34 -14.620 -8.272 15.275 1.00 93.44 C
ATOM 7 C4' C B 34 -13.565 -7.429 14.570 1.00 87.86 C
ATOM 8 O4' C B 34 -12.367 -7.354 15.389 1.00 87.32 O
ATOM 9 C3' C B 34 -13.125 -7.925 13.190 1.00 84.17 C
ATOM 10 O3' C B 34 -13.119 -6.837 12.260 1.00 80.54 O
ATOM 11 C2' C B 34 -11.718 -8.475 13.438 1.00 82.83 C
ATOM 12 O2' C B 34 -10.869 -8.351 12.312 1.00 78.52 O
ATOM 13 C1' C B 34 -11.233 -7.579 14.577 1.00 83.34 C
ATOM 14 N1 C B 34 -10.133 -8.171 15.418 1.00 84.52 N
ATOM 15 C2 C B 34 -8.878 -7.535 15.485 1.00 81.89 C
ATOM 16 O2 C B 34 -8.684 -6.489 14.852 1.00 78.41 O
ATOM 17 N3 C B 34 -7.900 -8.089 16.252 1.00 83.45 N
ATOM 18 C4 C B 34 -8.133 -9.219 16.929 1.00 87.39 C
ATOM 19 N4 C B 34 -7.138 -9.723 17.670 1.00 88.76 N
ATOM 20 C5 C B 34 -9.399 -9.881 16.876 1.00 90.20 C
ATOM 21 C6 C B 34 -10.357 -9.328 16.119 1.00 88.73 C
ATOM 22 P C B 35 -14.284 -6.644 11.171 1.00 80.16 P
ATOM 23 OP1 C B 35 -15.367 -7.616 11.454 1.00 84.62 O
ATOM 24 OP2 C B 35 -13.644 -6.630 9.834 1.00 75.73 O
ATOM 25 O5' C B 35 -14.800 -5.151 11.471 1.00 80.36 O
TER

Atoms:
C2: (-8.494,-13.338,16.045)
OP1: (-13.410,-11.557,9.850)
OP2: (-11.136,-10.466,10.255)
C4: (-7.002,-11.934,14.911)
O5': (-12.119,-11.977,11.974)
C3': (-12.844,-12.225,14.973)
C1': (-10.874,-13.587,15.247)
O4': (-11.422,-13.815,13.963)
C5': (-13.103,-12.885,12.487)
P: (-12.041,-11.627,10.411)
O2: (-8.753,-14.131,16.963)
C4': (-12.780,-13.318,13.911)
C2': (-11.847,-12.704,16.031)
O2': (-12.457,-13.456,17.063)
N1: (-9.495,-12.993,15.115)
N3: (-7.256,-12.788,15.910)
N4: (-5.769,-11.424,14.823)
C6: (-9.219,-12.116,14.096)
C5: (-8.002,-11.570,13.956)
O3': (-14.162,-12.133,15.517)
C2: (-8.878,-7.535,15.485)
OP1: (-16.175,-10.878,16.265)
OP2: (-15.446,-10.841,13.811)
C4: (-8.133,-9.219,16.929)
O5': (-14.147,-9.597,15.538)
C3': (-13.125,-7.925,13.190)
C1': (-11.233,-7.579,14.577)
O4': (-12.367,-7.354,15.389)
C5': (-14.620,-8.272,15.275)
P: (-15.098,-10.856,15.250)
O2: (-8.684,-6.489,14.852)
C4': (-13.565,-7.429,14.570)
C2': (-11.718,-8.475,13.438)
O2': (-10.869,-8.351,12.312)
N1: (-10.133,-8.171,15.418)
N3: (-7.900,-8.089,16.252)
N4: (-7.138,-9.723,17.670)
C6: (-10.357,-9.328,16.119)
C5: (-9.399,-9.881,16.876)
O3': (-13.119,-6.837,12.260)
Image (generated by PyMOL):
PyMOL image
show in jmol